EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0025573 (Gene tree)
Gene ID: 110318920
Gene Symbol: Rpusd2
Alias: 4921503C21Rik|BB231107
Full Name: RNA pseudouridine synthase domain containing 2
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 5392 bases
Position: chr3:102450651-102456042
Accession: 110318920
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0064781	PseudoU_synth_2	PF00849.22	2.2e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0064781	-	2920	-	MGP_PahariEiJ_P0064781	553 (aa)	XP_021049923	UPI000A3092C3

Gene Model

Click here to download MGP_PahariEiJ_G0025573's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0025573's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0025573	Rpusd2	100	76.703	ENSG00000166133	RPUSD2	100	76.703	Homo_sapiens
MGP_PahariEiJ_G0025573	Rpusd2	79	57.701	ENSAPOG00000000817	rpusd2	84	56.846	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0025573	Rpusd2	100	77.240	ENSAMEG00000016996	RPUSD2	100	77.240	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0025573	Rpusd2	78	60.407	ENSACIG00000024029	rpusd2	91	59.695	Amphilophus_citrinellus
MGP_PahariEiJ_G0025573	Rpusd2	78	57.424	ENSAOCG00000015237	rpusd2	84	56.341	Amphiprion_ocellaris
MGP_PahariEiJ_G0025573	Rpusd2	78	56.987	ENSAPEG00000021763	rpusd2	84	55.925	Amphiprion_percula
MGP_PahariEiJ_G0025573	Rpusd2	78	57.203	ENSATEG00000015242	rpusd2	82	56.701	Anabas_testudineus
MGP_PahariEiJ_G0025573	Rpusd2	76	65.796	ENSAPLG00000004723	RPUSD2	99	65.796	Anas_platyrhynchos
MGP_PahariEiJ_G0025573	Rpusd2	78	67.865	ENSACAG00000013893	RPUSD2	92	67.929	Anolis_carolinensis
MGP_PahariEiJ_G0025573	Rpusd2	100	78.253	ENSANAG00000009691	RPUSD2	100	78.253	Aotus_nancymaae
MGP_PahariEiJ_G0025573	Rpusd2	78	58.315	ENSACLG00000019531	rpusd2	83	57.708	Astatotilapia_calliptera
MGP_PahariEiJ_G0025573	Rpusd2	78	57.231	ENSAMXG00000013376	rpusd2	99	49.838	Astyanax_mexicanus
MGP_PahariEiJ_G0025573	Rpusd2	99	76.661	ENSBTAG00000003193	RPUSD2	99	77.020	Bos_taurus
MGP_PahariEiJ_G0025573	Rpusd2	72	35.930	WBGene00019498	K07E8.7	97	35.516	Caenorhabditis_elegans
MGP_PahariEiJ_G0025573	Rpusd2	100	77.184	ENSCJAG00000020841	RPUSD2	100	77.184	Callithrix_jacchus
MGP_PahariEiJ_G0025573	Rpusd2	100	76.523	ENSCAFG00000009165	RPUSD2	100	76.523	Canis_familiaris
MGP_PahariEiJ_G0025573	Rpusd2	100	76.523	ENSCAFG00020005849	RPUSD2	100	76.523	Canis_lupus_dingo
MGP_PahariEiJ_G0025573	Rpusd2	99	76.703	ENSCHIG00000006152	RPUSD2	99	76.703	Capra_hircus
MGP_PahariEiJ_G0025573	Rpusd2	100	77.362	ENSTSYG00000012844	RPUSD2	100	77.362	Carlito_syrichta
MGP_PahariEiJ_G0025573	Rpusd2	51	86.760	ENSCAPG00000006895	-	100	86.760	Cavia_aperea
MGP_PahariEiJ_G0025573	Rpusd2	98	78.832	ENSCPOG00000013201	RPUSD2	98	78.832	Cavia_porcellus
MGP_PahariEiJ_G0025573	Rpusd2	96	80.037	ENSCCAG00000024378	RPUSD2	96	80.037	Cebus_capucinus
MGP_PahariEiJ_G0025573	Rpusd2	100	77.061	ENSCATG00000043734	RPUSD2	100	77.061	Cercocebus_atys
MGP_PahariEiJ_G0025573	Rpusd2	98	80.295	ENSCLAG00000011862	RPUSD2	98	80.295	Chinchilla_lanigera
MGP_PahariEiJ_G0025573	Rpusd2	94	78.692	ENSCSAG00000007538	RPUSD2	100	79.962	Chlorocebus_sabaeus
MGP_PahariEiJ_G0025573	Rpusd2	61	83.382	ENSCHOG00000004834	RPUSD2	63	83.965	Choloepus_hoffmanni
MGP_PahariEiJ_G0025573	Rpusd2	84	62.103	ENSCPBG00000013419	RPUSD2	94	62.103	Chrysemys_picta_bellii
MGP_PahariEiJ_G0025573	Rpusd2	100	77.240	ENSCANG00000003659	RPUSD2	100	77.240	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0025573	Rpusd2	100	87.184	ENSCGRG00001009839	Rpusd2	97	87.184	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0025573	Rpusd2	100	87.184	ENSCGRG00000012348	Rpusd2	100	87.184	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0025573	Rpusd2	86	55.467	ENSCSEG00000001953	rpusd2	86	55.467	Cynoglossus_semilaevis
MGP_PahariEiJ_G0025573	Rpusd2	78	60.811	ENSCVAG00000010848	rpusd2	88	57.746	Cyprinodon_variegatus
MGP_PahariEiJ_G0025573	Rpusd2	78	60.262	ENSDARG00000060992	rpusd2	82	58.678	Danio_rerio
MGP_PahariEiJ_G0025573	Rpusd2	100	75.583	ENSDNOG00000047745	RPUSD2	100	75.583	Dasypus_novemcinctus
MGP_PahariEiJ_G0025573	Rpusd2	78	87.239	ENSDORG00000009092	Rpusd2	100	87.239	Dipodomys_ordii
MGP_PahariEiJ_G0025573	Rpusd2	84	46.250	FBgn0032256	RluA-2	85	46.250	Drosophila_melanogaster
MGP_PahariEiJ_G0025573	Rpusd2	76	47.761	FBgn0051719	RluA-1	63	47.761	Drosophila_melanogaster
MGP_PahariEiJ_G0025573	Rpusd2	100	73.393	ENSETEG00000008581	RPUSD2	100	73.393	Echinops_telfairi
MGP_PahariEiJ_G0025573	Rpusd2	75	36.073	ENSEBUG00000012149	rpusd2	89	35.065	Eptatretus_burgeri
MGP_PahariEiJ_G0025573	Rpusd2	100	76.744	ENSEASG00005016463	RPUSD2	99	76.744	Equus_asinus_asinus
MGP_PahariEiJ_G0025573	Rpusd2	100	76.923	ENSECAG00000024178	RPUSD2	99	76.923	Equus_caballus
MGP_PahariEiJ_G0025573	Rpusd2	97	66.364	ENSEEUG00000005132	RPUSD2	98	66.364	Erinaceus_europaeus
MGP_PahariEiJ_G0025573	Rpusd2	80	59.236	ENSELUG00000016786	rpusd2	85	59.236	Esox_lucius
MGP_PahariEiJ_G0025573	Rpusd2	95	79.925	ENSFCAG00000040796	RPUSD2	95	79.925	Felis_catus
MGP_PahariEiJ_G0025573	Rpusd2	77	68.807	ENSFALG00000001122	RPUSD2	96	68.919	Ficedula_albicollis
MGP_PahariEiJ_G0025573	Rpusd2	94	79.238	ENSFDAG00000003070	RPUSD2	100	79.238	Fukomys_damarensis
MGP_PahariEiJ_G0025573	Rpusd2	80	58.621	ENSFHEG00000007518	rpusd2	84	58.621	Fundulus_heteroclitus
MGP_PahariEiJ_G0025573	Rpusd2	78	60.000	ENSGMOG00000011014	rpusd2	95	58.974	Gadus_morhua
MGP_PahariEiJ_G0025573	Rpusd2	82	63.673	ENSGALG00000041216	RPUSD2	99	63.673	Gallus_gallus
MGP_PahariEiJ_G0025573	Rpusd2	85	57.983	ENSGAFG00000003390	rpusd2	85	57.983	Gambusia_affinis
MGP_PahariEiJ_G0025573	Rpusd2	87	53.191	ENSGACG00000008656	rpusd2	98	53.191	Gasterosteus_aculeatus
MGP_PahariEiJ_G0025573	Rpusd2	80	67.946	ENSGAGG00000013098	RPUSD2	86	67.946	Gopherus_agassizii
MGP_PahariEiJ_G0025573	Rpusd2	100	76.344	ENSGGOG00000006684	RPUSD2	100	76.344	Gorilla_gorilla
MGP_PahariEiJ_G0025573	Rpusd2	78	58.099	ENSHBUG00000023777	rpusd2	83	57.500	Haplochromis_burtoni
MGP_PahariEiJ_G0025573	Rpusd2	100	77.978	ENSHGLG00000012765	RPUSD2	100	77.978	Heterocephalus_glaber_female
MGP_PahariEiJ_G0025573	Rpusd2	100	77.978	ENSHGLG00100006653	RPUSD2	100	77.978	Heterocephalus_glaber_male
MGP_PahariEiJ_G0025573	Rpusd2	80	57.505	ENSHCOG00000015587	rpusd2	81	57.505	Hippocampus_comes
MGP_PahariEiJ_G0025573	Rpusd2	87	58.350	ENSIPUG00000021006	rpusd2	86	58.350	Ictalurus_punctatus
MGP_PahariEiJ_G0025573	Rpusd2	100	77.857	ENSSTOG00000025619	RPUSD2	100	77.857	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0025573	Rpusd2	100	79.099	ENSJJAG00000023160	Rpusd2	100	80.000	Jaculus_jaculus
MGP_PahariEiJ_G0025573	Rpusd2	78	58.458	ENSKMAG00000006618	rpusd2	86	55.769	Kryptolebias_marmoratus
MGP_PahariEiJ_G0025573	Rpusd2	78	56.645	ENSLBEG00000021571	rpusd2	87	54.309	Labrus_bergylta
MGP_PahariEiJ_G0025573	Rpusd2	78	64.912	ENSLACG00000017338	RPUSD2	100	64.912	Latimeria_chalumnae
MGP_PahariEiJ_G0025573	Rpusd2	78	63.781	ENSLOCG00000014755	rpusd2	92	63.077	Lepisosteus_oculatus
MGP_PahariEiJ_G0025573	Rpusd2	98	76.923	ENSLAFG00000015588	RPUSD2	99	76.923	Loxodonta_africana
MGP_PahariEiJ_G0025573	Rpusd2	100	77.240	ENSMFAG00000045062	RPUSD2	100	77.240	Macaca_fascicularis
MGP_PahariEiJ_G0025573	Rpusd2	100	77.419	ENSMMUG00000001483	RPUSD2	100	77.419	Macaca_mulatta
MGP_PahariEiJ_G0025573	Rpusd2	100	67.972	ENSMNEG00000041429	RPUSD2	100	67.972	Macaca_nemestrina
MGP_PahariEiJ_G0025573	Rpusd2	75	86.589	ENSMLEG00000036551	RPUSD2	99	86.589	Mandrillus_leucophaeus
MGP_PahariEiJ_G0025573	Rpusd2	79	56.549	ENSMAMG00000001077	rpusd2	84	54.721	Mastacembelus_armatus
MGP_PahariEiJ_G0025573	Rpusd2	78	58.315	ENSMZEG00005006947	rpusd2	91	57.708	Maylandia_zebra
MGP_PahariEiJ_G0025573	Rpusd2	80	68.233	ENSMGAG00000003058	RPUSD2	98	68.233	Meleagris_gallopavo
MGP_PahariEiJ_G0025573	Rpusd2	100	88.267	ENSMAUG00000020467	Rpusd2	100	88.267	Mesocricetus_auratus
MGP_PahariEiJ_G0025573	Rpusd2	99	78.727	ENSMICG00000028637	RPUSD2	99	78.727	Microcebus_murinus
MGP_PahariEiJ_G0025573	Rpusd2	100	85.971	ENSMOCG00000020061	Rpusd2	100	85.971	Microtus_ochrogaster
MGP_PahariEiJ_G0025573	Rpusd2	78	59.333	ENSMMOG00000012020	rpusd2	93	54.389	Mola_mola
MGP_PahariEiJ_G0025573	Rpusd2	85	75.052	ENSMODG00000000300	RPUSD2	88	75.052	Monodelphis_domestica
MGP_PahariEiJ_G0025573	Rpusd2	78	55.346	ENSMALG00000010024	rpusd2	83	54.491	Monopterus_albus
MGP_PahariEiJ_G0025573	Rpusd2	100	96.383	MGP_CAROLIEiJ_G0024130	Rpusd2	100	96.383	Mus_caroli
MGP_PahariEiJ_G0025573	Rpusd2	100	96.383	ENSMUSG00000027324	Rpusd2	100	96.383	Mus_musculus
MGP_PahariEiJ_G0025573	Rpusd2	100	95.298	MGP_SPRETEiJ_G0025046	Rpusd2	100	95.298	Mus_spretus
MGP_PahariEiJ_G0025573	Rpusd2	100	77.599	ENSMPUG00000008517	RPUSD2	100	77.599	Mustela_putorius_furo
MGP_PahariEiJ_G0025573	Rpusd2	94	79.389	ENSMLUG00000007971	RPUSD2	99	79.389	Myotis_lucifugus
MGP_PahariEiJ_G0025573	Rpusd2	100	80.755	ENSNGAG00000014126	Rpusd2	100	80.755	Nannospalax_galili
MGP_PahariEiJ_G0025573	Rpusd2	78	59.909	ENSNBRG00000010070	rpusd2	95	53.774	Neolamprologus_brichardi
MGP_PahariEiJ_G0025573	Rpusd2	100	77.240	ENSNLEG00000035735	RPUSD2	100	77.240	Nomascus_leucogenys
MGP_PahariEiJ_G0025573	Rpusd2	100	67.082	ENSMEUG00000008500	RPUSD2	100	67.082	Notamacropus_eugenii
MGP_PahariEiJ_G0025573	Rpusd2	100	75.090	ENSOPRG00000014177	-	100	75.090	Ochotona_princeps
MGP_PahariEiJ_G0025573	Rpusd2	96	82.739	ENSODEG00000017193	RPUSD2	97	82.739	Octodon_degus
MGP_PahariEiJ_G0025573	Rpusd2	78	60.183	ENSONIG00000020102	rpusd2	91	59.471	Oreochromis_niloticus
MGP_PahariEiJ_G0025573	Rpusd2	100	77.240	ENSOCUG00000015745	RPUSD2	97	77.240	Oryctolagus_cuniculus
MGP_PahariEiJ_G0025573	Rpusd2	80	59.688	ENSORLG00000015516	rpusd2	83	59.688	Oryzias_latipes
MGP_PahariEiJ_G0025573	Rpusd2	84	58.105	ENSORLG00020010533	rpusd2	86	58.105	Oryzias_latipes_hni
MGP_PahariEiJ_G0025573	Rpusd2	80	59.911	ENSORLG00015009206	rpusd2	82	59.911	Oryzias_latipes_hsok
MGP_PahariEiJ_G0025573	Rpusd2	84	56.263	ENSOMEG00000007355	rpusd2	81	56.468	Oryzias_melastigma
MGP_PahariEiJ_G0025573	Rpusd2	96	78.318	ENSOGAG00000004867	RPUSD2	100	78.318	Otolemur_garnettii
MGP_PahariEiJ_G0025573	Rpusd2	99	75.090	ENSOARG00000020235	RPUSD2	99	75.806	Ovis_aries
MGP_PahariEiJ_G0025573	Rpusd2	100	76.882	ENSPPAG00000032874	RPUSD2	100	76.882	Pan_paniscus
MGP_PahariEiJ_G0025573	Rpusd2	100	77.957	ENSPPRG00000010446	RPUSD2	100	77.957	Panthera_pardus
MGP_PahariEiJ_G0025573	Rpusd2	100	77.778	ENSPTIG00000013316	RPUSD2	100	77.778	Panthera_tigris_altaica
MGP_PahariEiJ_G0025573	Rpusd2	100	76.882	ENSPTRG00000006924	RPUSD2	100	76.882	Pan_troglodytes
MGP_PahariEiJ_G0025573	Rpusd2	100	76.703	ENSPANG00000019339	RPUSD2	100	76.703	Papio_anubis
MGP_PahariEiJ_G0025573	Rpusd2	84	67.582	ENSPKIG00000023017	rpusd2	73	64.433	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0025573	Rpusd2	61	64.571	ENSPSIG00000012680	RPUSD2	99	64.571	Pelodiscus_sinensis
MGP_PahariEiJ_G0025573	Rpusd2	78	58.661	ENSPMGG00000018165	rpusd2	80	57.906	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0025573	Rpusd2	99	86.257	ENSPEMG00000012878	Rpusd2	99	86.257	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0025573	Rpusd2	89	71.961	ENSPCIG00000023199	RPUSD2	95	71.961	Phascolarctos_cinereus
MGP_PahariEiJ_G0025573	Rpusd2	87	55.894	ENSPFOG00000006829	rpusd2	88	55.894	Poecilia_formosa
MGP_PahariEiJ_G0025573	Rpusd2	87	55.804	ENSPLAG00000022914	rpusd2	99	55.804	Poecilia_latipinna
MGP_PahariEiJ_G0025573	Rpusd2	87	55.894	ENSPMEG00000009835	rpusd2	99	55.894	Poecilia_mexicana
MGP_PahariEiJ_G0025573	Rpusd2	80	59.607	ENSPREG00000016441	rpusd2	79	59.607	Poecilia_reticulata
MGP_PahariEiJ_G0025573	Rpusd2	100	77.599	ENSPPYG00000006355	RPUSD2	100	77.599	Pongo_abelii
MGP_PahariEiJ_G0025573	Rpusd2	100	77.240	ENSPCOG00000028019	RPUSD2	100	77.240	Propithecus_coquereli
MGP_PahariEiJ_G0025573	Rpusd2	100	75.627	ENSPVAG00000001837	RPUSD2	100	75.627	Pteropus_vampyrus
MGP_PahariEiJ_G0025573	Rpusd2	78	60.000	ENSPNYG00000021507	rpusd2	90	59.292	Pundamilia_nyererei
MGP_PahariEiJ_G0025573	Rpusd2	100	92.948	ENSRNOG00000010528	LOC100911166	100	92.948	Rattus_norvegicus
MGP_PahariEiJ_G0025573	Rpusd2	100	92.948	ENSRNOG00000046797	Rpusd2	100	92.948	Rattus_norvegicus
MGP_PahariEiJ_G0025573	Rpusd2	100	77.419	ENSRBIG00000030813	RPUSD2	100	77.419	Rhinopithecus_bieti
MGP_PahariEiJ_G0025573	Rpusd2	100	77.240	ENSRROG00000026664	RPUSD2	100	77.240	Rhinopithecus_roxellana
MGP_PahariEiJ_G0025573	Rpusd2	52	47.635	YOL066C	RIB2	50	47.635	Saccharomyces_cerevisiae
MGP_PahariEiJ_G0025573	Rpusd2	50	46.853	YDL036C	-	61	46.853	Saccharomyces_cerevisiae
MGP_PahariEiJ_G0025573	Rpusd2	100	77.362	ENSSBOG00000035031	RPUSD2	100	77.897	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0025573	Rpusd2	61	74.709	ENSSHAG00000015108	RPUSD2	91	74.709	Sarcophilus_harrisii
MGP_PahariEiJ_G0025573	Rpusd2	78	60.988	ENSSFOG00015019057	rpusd2	79	57.461	Scleropages_formosus
MGP_PahariEiJ_G0025573	Rpusd2	80	56.549	ENSSMAG00000000903	rpusd2	91	56.549	Scophthalmus_maximus
MGP_PahariEiJ_G0025573	Rpusd2	78	55.833	ENSSDUG00000019139	rpusd2	91	52.252	Seriola_dumerili
MGP_PahariEiJ_G0025573	Rpusd2	78	55.833	ENSSLDG00000005938	rpusd2	87	53.484	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0025573	Rpusd2	86	82.744	ENSSARG00000002792	RPUSD2	88	82.744	Sorex_araneus
MGP_PahariEiJ_G0025573	Rpusd2	80	64.425	ENSSPUG00000001206	RPUSD2	90	64.425	Sphenodon_punctatus
MGP_PahariEiJ_G0025573	Rpusd2	78	57.173	ENSSPAG00000003578	rpusd2	83	55.809	Stegastes_partitus
MGP_PahariEiJ_G0025573	Rpusd2	99	78.559	ENSSSCG00000036700	RPUSD2	99	78.559	Sus_scrofa
MGP_PahariEiJ_G0025573	Rpusd2	78	55.794	ENSTRUG00000025880	rpusd2	90	55.532	Takifugu_rubripes
MGP_PahariEiJ_G0025573	Rpusd2	78	59.459	ENSTNIG00000017329	rpusd2	91	58.862	Tetraodon_nigroviridis
MGP_PahariEiJ_G0025573	Rpusd2	100	68.459	ENSTBEG00000007933	RPUSD2	100	68.459	Tupaia_belangeri
MGP_PahariEiJ_G0025573	Rpusd2	100	76.882	ENSTTRG00000010585	RPUSD2	100	76.882	Tursiops_truncatus
MGP_PahariEiJ_G0025573	Rpusd2	94	80.534	ENSUAMG00000001470	RPUSD2	100	80.534	Ursus_americanus
MGP_PahariEiJ_G0025573	Rpusd2	100	77.599	ENSUMAG00000012487	RPUSD2	88	77.599	Ursus_maritimus
MGP_PahariEiJ_G0025573	Rpusd2	100	75.806	ENSVPAG00000003844	RPUSD2	100	75.806	Vicugna_pacos
MGP_PahariEiJ_G0025573	Rpusd2	100	76.523	ENSVVUG00000026590	RPUSD2	100	76.523	Vulpes_vulpes
MGP_PahariEiJ_G0025573	Rpusd2	82	64.240	ENSXETG00000015973	rpusd2	100	64.240	Xenopus_tropicalis
MGP_PahariEiJ_G0025573	Rpusd2	87	56.148	ENSXMAG00000021821	rpusd2	99	56.148	Xiphophorus_maculatus