EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0025587 (Gene tree)
Gene ID: 110317830
Gene Symbol: Ino80
Alias: 2310079N15Rik|4632409L19Rik|INO80|Inoc1
Full Name: INO80 complex subunit
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 97423 bases
Position: chr3:102797177-102894599
Accession: 110317830
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0064833	ResIII	PF04851.15	1.5e-05	1	1
MGP_PahariEiJ_P0064832	ResIII	PF04851.15	3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0064832	-	6361	XM_021192643	MGP_PahariEiJ_P0064832	1559 (aa)	XP_021048302	UPI000A306A91
MGP_PahariEiJ_T0064833	-	3916	-	MGP_PahariEiJ_P0064833	1141 (aa)	-	-
MGP_PahariEiJ_T0064834	-	399	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0025587's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0025587's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0025587	Ino80	100	96.793	ENSG00000128908	INO80	100	98.837	Homo_sapiens
MGP_PahariEiJ_G0025587	Ino80	99	70.348	ENSAPOG00000012586	ino80	99	70.070	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0025587	Ino80	100	96.669	ENSAMEG00000016796	INO80	100	96.669	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0025587	Ino80	99	70.968	ENSACIG00000001918	ino80	98	73.234	Amphilophus_citrinellus
MGP_PahariEiJ_G0025587	Ino80	98	74.100	ENSAOCG00000000490	ino80	99	72.676	Amphiprion_ocellaris
MGP_PahariEiJ_G0025587	Ino80	97	74.837	ENSAPEG00000022911	ino80	99	72.819	Amphiprion_percula
MGP_PahariEiJ_G0025587	Ino80	99	72.987	ENSATEG00000001271	ino80	99	72.247	Anabas_testudineus
MGP_PahariEiJ_G0025587	Ino80	100	89.942	ENSAPLG00000013656	INO80	100	89.942	Anas_platyrhynchos
MGP_PahariEiJ_G0025587	Ino80	99	86.140	ENSACAG00000003531	INO80	99	88.161	Anolis_carolinensis
MGP_PahariEiJ_G0025587	Ino80	100	96.344	ENSANAG00000032223	INO80	100	96.344	Aotus_nancymaae
MGP_PahariEiJ_G0025587	Ino80	99	67.731	ENSACLG00000006610	ino80	99	70.732	Astatotilapia_calliptera
MGP_PahariEiJ_G0025587	Ino80	100	95.466	ENSBTAG00000010380	INO80	100	95.785	Bos_taurus
MGP_PahariEiJ_G0025587	Ino80	100	96.344	ENSCJAG00000020770	-	100	96.344	Callithrix_jacchus
MGP_PahariEiJ_G0025587	Ino80	100	96.731	ENSCAFG00000009492	INO80	100	96.731	Canis_familiaris
MGP_PahariEiJ_G0025587	Ino80	96	95.450	ENSCAFG00020005524	-	99	95.814	Canis_lupus_dingo
MGP_PahariEiJ_G0025587	Ino80	100	95.836	ENSCHIG00000010246	INO80	100	95.913	Capra_hircus
MGP_PahariEiJ_G0025587	Ino80	100	96.857	ENSTSYG00000003252	INO80	100	96.857	Carlito_syrichta
MGP_PahariEiJ_G0025587	Ino80	100	96.665	ENSCPOG00000011386	INO80	100	96.665	Cavia_porcellus
MGP_PahariEiJ_G0025587	Ino80	100	95.959	ENSCCAG00000030680	INO80	100	95.510	Cebus_capucinus
MGP_PahariEiJ_G0025587	Ino80	100	96.729	ENSCATG00000040663	INO80	100	96.729	Cercocebus_atys
MGP_PahariEiJ_G0025587	Ino80	100	96.408	ENSCLAG00000008397	INO80	100	96.408	Chinchilla_lanigera
MGP_PahariEiJ_G0025587	Ino80	100	96.793	ENSCSAG00000007632	INO80	100	96.793	Chlorocebus_sabaeus
MGP_PahariEiJ_G0025587	Ino80	73	93.939	ENSCHOG00000011938	INO80	77	95.858	Choloepus_hoffmanni
MGP_PahariEiJ_G0025587	Ino80	100	89.942	ENSCPBG00000013491	INO80	100	89.942	Chrysemys_picta_bellii
MGP_PahariEiJ_G0025587	Ino80	100	89.865	ENSCANG00000036208	INO80	100	88.854	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0025587	Ino80	100	98.268	ENSCGRG00001013566	Ino80	100	98.268	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0025587	Ino80	100	98.268	ENSCGRG00000001290	Ino80	100	98.268	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0025587	Ino80	91	72.034	ENSCSEG00000019370	ino80	94	74.621	Cynoglossus_semilaevis
MGP_PahariEiJ_G0025587	Ino80	97	74.017	ENSCVAG00000021470	ino80	100	72.299	Cyprinodon_variegatus
MGP_PahariEiJ_G0025587	Ino80	97	75.688	ENSDARG00000070432	ino80	97	75.758	Danio_rerio
MGP_PahariEiJ_G0025587	Ino80	100	96.600	ENSDNOG00000010267	INO80	100	96.600	Dasypus_novemcinctus
MGP_PahariEiJ_G0025587	Ino80	84	66.627	ENSEBUG00000001921	ino80	96	65.585	Eptatretus_burgeri
MGP_PahariEiJ_G0025587	Ino80	100	95.964	ENSEASG00005016405	INO80	100	96.220	Equus_asinus_asinus
MGP_PahariEiJ_G0025587	Ino80	99	70.815	ENSELUG00000001071	ino80	96	72.833	Esox_lucius
MGP_PahariEiJ_G0025587	Ino80	100	96.797	ENSFCAG00000014722	INO80	100	96.797	Felis_catus
MGP_PahariEiJ_G0025587	Ino80	100	89.045	ENSFALG00000006125	INO80	100	88.789	Ficedula_albicollis
MGP_PahariEiJ_G0025587	Ino80	99	95.959	ENSFDAG00000005624	INO80	99	95.895	Fukomys_damarensis
MGP_PahariEiJ_G0025587	Ino80	83	75.172	ENSFHEG00000020436	ino80	88	75.057	Fundulus_heteroclitus
MGP_PahariEiJ_G0025587	Ino80	99	68.670	ENSGMOG00000006031	ino80	99	71.306	Gadus_morhua
MGP_PahariEiJ_G0025587	Ino80	100	89.942	ENSGALG00000008553	INO80	100	89.942	Gallus_gallus
MGP_PahariEiJ_G0025587	Ino80	98	74.050	ENSGAFG00000006358	ino80	98	74.851	Gambusia_affinis
MGP_PahariEiJ_G0025587	Ino80	97	71.863	ENSGACG00000012960	ino80	99	70.080	Gasterosteus_aculeatus
MGP_PahariEiJ_G0025587	Ino80	99	89.113	ENSGAGG00000019203	INO80	99	90.671	Gopherus_agassizii
MGP_PahariEiJ_G0025587	Ino80	99	71.305	ENSHBUG00000022614	ino80	99	73.927	Haplochromis_burtoni
MGP_PahariEiJ_G0025587	Ino80	100	95.767	ENSHGLG00000018136	INO80	100	95.767	Heterocephalus_glaber_female
MGP_PahariEiJ_G0025587	Ino80	100	95.125	ENSHGLG00100006571	INO80	100	94.804	Heterocephalus_glaber_male
MGP_PahariEiJ_G0025587	Ino80	98	73.554	ENSHCOG00000002445	ino80	96	73.792	Hippocampus_comes
MGP_PahariEiJ_G0025587	Ino80	99	71.515	ENSIPUG00000018905	ino80	97	74.290	Ictalurus_punctatus
MGP_PahariEiJ_G0025587	Ino80	100	97.308	ENSSTOG00000000427	INO80	100	97.308	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0025587	Ino80	99	92.788	ENSJJAG00000016166	Ino80	100	90.763	Jaculus_jaculus
MGP_PahariEiJ_G0025587	Ino80	99	69.774	ENSKMAG00000019273	ino80	99	72.215	Kryptolebias_marmoratus
MGP_PahariEiJ_G0025587	Ino80	99	69.715	ENSLBEG00000024288	ino80	97	72.046	Labrus_bergylta
MGP_PahariEiJ_G0025587	Ino80	98	73.688	ENSLACG00000008666	INO80	98	74.059	Latimeria_chalumnae
MGP_PahariEiJ_G0025587	Ino80	100	78.005	ENSLOCG00000012304	ino80	100	77.621	Lepisosteus_oculatus
MGP_PahariEiJ_G0025587	Ino80	100	96.216	ENSLAFG00000009951	INO80	100	96.216	Loxodonta_africana
MGP_PahariEiJ_G0025587	Ino80	100	96.857	ENSMFAG00000044488	INO80	100	96.857	Macaca_fascicularis
MGP_PahariEiJ_G0025587	Ino80	100	96.857	ENSMMUG00000001737	INO80	100	96.857	Macaca_mulatta
MGP_PahariEiJ_G0025587	Ino80	100	96.665	ENSMNEG00000034906	INO80	100	96.665	Macaca_nemestrina
MGP_PahariEiJ_G0025587	Ino80	100	96.857	ENSMLEG00000042117	INO80	100	96.857	Mandrillus_leucophaeus
MGP_PahariEiJ_G0025587	Ino80	96	66.070	ENSMAMG00000013786	ino80	99	65.622	Mastacembelus_armatus
MGP_PahariEiJ_G0025587	Ino80	99	70.840	ENSMZEG00005013146	ino80	99	73.097	Maylandia_zebra
MGP_PahariEiJ_G0025587	Ino80	99	89.649	ENSMGAG00000011164	INO80	99	90.268	Meleagris_gallopavo
MGP_PahariEiJ_G0025587	Ino80	99	97.977	ENSMAUG00000020670	Ino80	100	96.857	Mesocricetus_auratus
MGP_PahariEiJ_G0025587	Ino80	100	96.087	ENSMICG00000005801	INO80	100	96.087	Microcebus_murinus
MGP_PahariEiJ_G0025587	Ino80	100	98.204	ENSMOCG00000016879	Ino80	100	98.204	Microtus_ochrogaster
MGP_PahariEiJ_G0025587	Ino80	96	66.214	ENSMMOG00000015046	ino80	99	65.730	Mola_mola
MGP_PahariEiJ_G0025587	Ino80	100	93.594	ENSMODG00000000184	INO80	100	93.338	Monodelphis_domestica
MGP_PahariEiJ_G0025587	Ino80	94	73.805	ENSMALG00000016488	ino80	98	76.454	Monopterus_albus
MGP_PahariEiJ_G0025587	Ino80	100	95.786	MGP_CAROLIEiJ_G0024144	Ino80	100	95.786	Mus_caroli
MGP_PahariEiJ_G0025587	Ino80	100	98.974	ENSMUSG00000034154	Ino80	100	98.974	Mus_musculus
MGP_PahariEiJ_G0025587	Ino80	100	98.910	MGP_SPRETEiJ_G0025060	Ino80	100	98.910	Mus_spretus
MGP_PahariEiJ_G0025587	Ino80	100	96.733	ENSMPUG00000008786	INO80	100	96.733	Mustela_putorius_furo
MGP_PahariEiJ_G0025587	Ino80	100	95.855	ENSMLUG00000017764	INO80	100	95.536	Myotis_lucifugus
MGP_PahariEiJ_G0025587	Ino80	100	97.183	ENSNGAG00000019497	Ino80	100	97.183	Nannospalax_galili
MGP_PahariEiJ_G0025587	Ino80	99	65.262	ENSNBRG00000022086	ino80	99	69.291	Neolamprologus_brichardi
MGP_PahariEiJ_G0025587	Ino80	100	94.548	ENSNLEG00000003454	INO80	100	94.099	Nomascus_leucogenys
MGP_PahariEiJ_G0025587	Ino80	99	75.462	ENSOPRG00000000831	INO80	91	77.908	Ochotona_princeps
MGP_PahariEiJ_G0025587	Ino80	100	95.895	ENSODEG00000016734	INO80	100	95.895	Octodon_degus
MGP_PahariEiJ_G0025587	Ino80	98	74.107	ENSONIG00000000772	ino80	99	72.968	Oreochromis_niloticus
MGP_PahariEiJ_G0025587	Ino80	100	96.665	ENSOCUG00000010763	INO80	100	96.665	Oryctolagus_cuniculus
MGP_PahariEiJ_G0025587	Ino80	98	71.612	ENSORLG00000018028	ino80	98	71.736	Oryzias_latipes
MGP_PahariEiJ_G0025587	Ino80	97	72.255	ENSORLG00015012507	ino80	98	71.671	Oryzias_latipes_hsok
MGP_PahariEiJ_G0025587	Ino80	96	72.918	ENSOMEG00000003791	ino80	96	72.160	Oryzias_melastigma
MGP_PahariEiJ_G0025587	Ino80	100	96.921	ENSOGAG00000008998	INO80	100	96.921	Otolemur_garnettii
MGP_PahariEiJ_G0025587	Ino80	100	95.208	ENSOARG00000020323	INO80	100	95.719	Ovis_aries
MGP_PahariEiJ_G0025587	Ino80	100	96.793	ENSPPAG00000042104	INO80	100	96.793	Pan_paniscus
MGP_PahariEiJ_G0025587	Ino80	100	96.797	ENSPPRG00000011011	INO80	100	96.797	Panthera_pardus
MGP_PahariEiJ_G0025587	Ino80	100	96.541	ENSPTIG00000005911	INO80	100	96.541	Panthera_tigris_altaica
MGP_PahariEiJ_G0025587	Ino80	100	96.857	ENSPTRG00000006939	INO80	100	96.857	Pan_troglodytes
MGP_PahariEiJ_G0025587	Ino80	100	96.857	ENSPANG00000019131	INO80	100	96.857	Papio_anubis
MGP_PahariEiJ_G0025587	Ino80	98	75.425	ENSPKIG00000021450	ino80	98	75.711	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0025587	Ino80	100	89.117	ENSPSIG00000014403	INO80	100	89.437	Pelodiscus_sinensis
MGP_PahariEiJ_G0025587	Ino80	99	98.155	ENSPEMG00000013114	-	100	98.155	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0025587	Ino80	100	93.530	ENSPCIG00000027848	INO80	100	93.274	Phascolarctos_cinereus
MGP_PahariEiJ_G0025587	Ino80	98	72.336	ENSPFOG00000013082	ino80	97	72.532	Poecilia_formosa
MGP_PahariEiJ_G0025587	Ino80	83	74.553	ENSPMEG00000021422	ino80	85	74.786	Poecilia_mexicana
MGP_PahariEiJ_G0025587	Ino80	99	70.833	ENSPREG00000013650	ino80	95	73.527	Poecilia_reticulata
MGP_PahariEiJ_G0025587	Ino80	99	94.273	ENSPPYG00000006368	INO80	99	93.822	Pongo_abelii
MGP_PahariEiJ_G0025587	Ino80	100	95.125	ENSPCOG00000022332	INO80	100	94.676	Propithecus_coquereli
MGP_PahariEiJ_G0025587	Ino80	100	94.035	ENSPVAG00000001852	INO80	100	93.521	Pteropus_vampyrus
MGP_PahariEiJ_G0025587	Ino80	99	67.913	ENSPNYG00000002995	ino80	99	71.353	Pundamilia_nyererei
MGP_PahariEiJ_G0025587	Ino80	100	74.920	ENSPNAG00000010386	ino80	100	75.000	Pygocentrus_nattereri
MGP_PahariEiJ_G0025587	Ino80	100	98.461	ENSRNOG00000014483	Ino80	100	98.461	Rattus_norvegicus
MGP_PahariEiJ_G0025587	Ino80	100	96.729	ENSRBIG00000031765	INO80	100	96.729	Rhinopithecus_bieti
MGP_PahariEiJ_G0025587	Ino80	100	96.793	ENSRROG00000033143	INO80	100	96.793	Rhinopithecus_roxellana
MGP_PahariEiJ_G0025587	Ino80	98	95.021	ENSSBOG00000023493	INO80	100	95.021	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0025587	Ino80	100	93.402	ENSSHAG00000016349	INO80	100	93.145	Sarcophilus_harrisii
MGP_PahariEiJ_G0025587	Ino80	98	76.536	ENSSFOG00015000183	ino80	99	76.486	Scleropages_formosus
MGP_PahariEiJ_G0025587	Ino80	97	73.916	ENSSMAG00000007221	ino80	99	72.481	Scophthalmus_maximus
MGP_PahariEiJ_G0025587	Ino80	98	73.802	ENSSDUG00000009957	ino80	99	72.516	Seriola_dumerili
MGP_PahariEiJ_G0025587	Ino80	98	71.633	ENSSLDG00000000389	ino80	91	72.456	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0025587	Ino80	99	94.820	ENSSARG00000007876	INO80	99	92.953	Sorex_araneus
MGP_PahariEiJ_G0025587	Ino80	99	68.352	ENSSPAG00000007779	ino80	98	72.108	Stegastes_partitus
MGP_PahariEiJ_G0025587	Ino80	100	95.722	ENSSSCG00000004753	INO80	100	95.722	Sus_scrofa
MGP_PahariEiJ_G0025587	Ino80	100	88.917	ENSTGUG00000010786	INO80	100	89.110	Taeniopygia_guttata
MGP_PahariEiJ_G0025587	Ino80	99	71.612	ENSTRUG00000013026	ino80	98	73.776	Takifugu_rubripes
MGP_PahariEiJ_G0025587	Ino80	100	94.804	ENSTTRG00000011479	INO80	100	94.355	Tursiops_truncatus
MGP_PahariEiJ_G0025587	Ino80	100	96.056	ENSUMAG00000012190	-	99	96.056	Ursus_maritimus
MGP_PahariEiJ_G0025587	Ino80	99	91.645	ENSVPAG00000002838	INO80	100	90.314	Vicugna_pacos
MGP_PahariEiJ_G0025587	Ino80	100	96.795	ENSVVUG00000026698	INO80	100	96.795	Vulpes_vulpes
MGP_PahariEiJ_G0025587	Ino80	99	73.414	ENSXETG00000034272	INO80	99	72.838	Xenopus_tropicalis
MGP_PahariEiJ_G0025587	Ino80	99	71.191	ENSXMAG00000006742	ino80	98	74.251	Xiphophorus_maculatus