EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0025588 (Gene tree)
Gene ID: 110317994
Gene Symbol: Exd1
Alias: 4932702D22Rik|Exdl1
Full Name: exonuclease 3'-5' domain containing 1
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 39983 bases
Position: chr3:102933416-102973398
Accession: 110317994
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0064835	DNA_pol_A_exo1	PF01612.20	2.3e-06	1	1
MGP_PahariEiJ_P0064836	DNA_pol_A_exo1	PF01612.20	2.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0064836	-	5270	-	MGP_PahariEiJ_P0064836	537 (aa)	XP_021048431	UPI000A309FC7
MGP_PahariEiJ_T0064837	-	544	-	MGP_PahariEiJ_P0064837	98 (aa)	-	-
MGP_PahariEiJ_T0064835	-	6127	-	MGP_PahariEiJ_P0064835	537 (aa)	XP_021048431	UPI000A309FC7

Gene Model

Click here to download MGP_PahariEiJ_G0025588's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0025588's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0025588	Exd1	99	68.476	ENSG00000178997	EXD1	98	79.630	Homo_sapiens
MGP_PahariEiJ_G0025588	Exd1	69	37.401	ENSAPOG00000004287	-	54	55.280	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0025588	Exd1	99	70.191	ENSAMEG00000016793	EXD1	100	70.191	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0025588	Exd1	69	40.943	ENSAOCG00000009355	-	71	40.943	Amphiprion_ocellaris
MGP_PahariEiJ_G0025588	Exd1	57	42.730	ENSAPEG00000002194	-	86	42.730	Amphiprion_percula
MGP_PahariEiJ_G0025588	Exd1	68	53.924	ENSACAG00000003676	EXD1	100	53.924	Anolis_carolinensis
MGP_PahariEiJ_G0025588	Exd1	99	68.357	ENSANAG00000029058	EXD1	99	68.357	Aotus_nancymaae
MGP_PahariEiJ_G0025588	Exd1	69	38.213	ENSACLG00000001361	-	72	38.213	Astatotilapia_calliptera
MGP_PahariEiJ_G0025588	Exd1	66	39.175	ENSAMXG00000026016	-	73	39.175	Astyanax_mexicanus
MGP_PahariEiJ_G0025588	Exd1	82	66.947	ENSBTAG00000008363	EXD1	99	66.947	Bos_taurus
MGP_PahariEiJ_G0025588	Exd1	99	66.123	ENSCJAG00000020765	EXD1	99	66.123	Callithrix_jacchus
MGP_PahariEiJ_G0025588	Exd1	99	67.130	ENSCAFG00000009510	EXD1	100	67.130	Canis_familiaris
MGP_PahariEiJ_G0025588	Exd1	72	68.262	ENSCAFG00020005504	EXD1	93	68.262	Canis_lupus_dingo
MGP_PahariEiJ_G0025588	Exd1	99	66.489	ENSCHIG00000019606	EXD1	99	66.489	Capra_hircus
MGP_PahariEiJ_G0025588	Exd1	99	64.386	ENSCPOG00000010573	EXD1	99	64.386	Cavia_porcellus
MGP_PahariEiJ_G0025588	Exd1	99	65.493	ENSCCAG00000016905	EXD1	99	65.493	Cebus_capucinus
MGP_PahariEiJ_G0025588	Exd1	99	69.231	ENSCATG00000037400	EXD1	99	69.231	Cercocebus_atys
MGP_PahariEiJ_G0025588	Exd1	87	53.606	ENSCSAG00000007647	EXD1	99	53.606	Chlorocebus_sabaeus
MGP_PahariEiJ_G0025588	Exd1	87	60.594	ENSCHOG00000011441	EXD1	99	60.594	Choloepus_hoffmanni
MGP_PahariEiJ_G0025588	Exd1	99	48.148	ENSCPBG00000013511	EXD1	93	48.316	Chrysemys_picta_bellii
MGP_PahariEiJ_G0025588	Exd1	99	67.754	ENSCANG00000036848	EXD1	99	67.754	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0025588	Exd1	100	80.736	ENSCGRG00001011355	Exd1	97	80.736	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0025588	Exd1	100	80.736	ENSCGRG00000011633	Exd1	100	80.736	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0025588	Exd1	66	39.075	ENSCSEG00000000904	-	68	39.075	Cynoglossus_semilaevis
MGP_PahariEiJ_G0025588	Exd1	63	33.787	ENSDARG00000098669	exd1	85	38.168	Danio_rerio
MGP_PahariEiJ_G0025588	Exd1	99	68.237	ENSDNOG00000011410	EXD1	99	68.237	Dasypus_novemcinctus
MGP_PahariEiJ_G0025588	Exd1	99	60.370	ENSDORG00000012079	Exd1	99	60.370	Dipodomys_ordii
MGP_PahariEiJ_G0025588	Exd1	68	56.111	ENSETEG00000014257	-	79	56.111	Echinops_telfairi
MGP_PahariEiJ_G0025588	Exd1	99	67.483	ENSEASG00005016394	EXD1	99	67.483	Equus_asinus_asinus
MGP_PahariEiJ_G0025588	Exd1	99	69.110	ENSECAG00000021250	EXD1	99	69.110	Equus_caballus
MGP_PahariEiJ_G0025588	Exd1	86	64.529	ENSEEUG00000001232	EXD1	99	64.529	Erinaceus_europaeus
MGP_PahariEiJ_G0025588	Exd1	69	40.050	ENSELUG00000006324	-	67	40.050	Esox_lucius
MGP_PahariEiJ_G0025588	Exd1	99	70.053	ENSFCAG00000028533	EXD1	99	70.053	Felis_catus
MGP_PahariEiJ_G0025588	Exd1	55	40.557	ENSGMOG00000015956	-	96	39.815	Gadus_morhua
MGP_PahariEiJ_G0025588	Exd1	66	48.196	ENSGALG00000041449	EXD1	95	48.196	Gallus_gallus
MGP_PahariEiJ_G0025588	Exd1	68	38.287	ENSGAFG00000017161	-	72	38.287	Gambusia_affinis
MGP_PahariEiJ_G0025588	Exd1	99	47.368	ENSGAGG00000019200	EXD1	93	47.368	Gopherus_agassizii
MGP_PahariEiJ_G0025588	Exd1	99	68.476	ENSGGOG00000004594	EXD1	99	68.476	Gorilla_gorilla
MGP_PahariEiJ_G0025588	Exd1	99	66.725	ENSHGLG00000015369	EXD1	99	66.725	Heterocephalus_glaber_female
MGP_PahariEiJ_G0025588	Exd1	99	65.674	ENSHGLG00100007398	EXD1	100	65.674	Heterocephalus_glaber_male
MGP_PahariEiJ_G0025588	Exd1	99	72.680	ENSSTOG00000014980	EXD1	99	72.680	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0025588	Exd1	69	39.552	ENSLBEG00000000022	-	69	39.552	Labrus_bergylta
MGP_PahariEiJ_G0025588	Exd1	75	44.009	ENSLACG00000006680	EXD1	72	44.009	Latimeria_chalumnae
MGP_PahariEiJ_G0025588	Exd1	69	40.196	ENSLOCG00000012278	-	97	40.196	Lepisosteus_oculatus
MGP_PahariEiJ_G0025588	Exd1	92	64.461	ENSLAFG00000014739	EXD1	99	64.461	Loxodonta_africana
MGP_PahariEiJ_G0025588	Exd1	99	68.881	ENSMFAG00000034670	EXD1	99	68.881	Macaca_fascicularis
MGP_PahariEiJ_G0025588	Exd1	99	68.881	ENSMMUG00000013991	EXD1	99	68.881	Macaca_mulatta
MGP_PahariEiJ_G0025588	Exd1	99	69.056	ENSMNEG00000037333	EXD1	99	69.056	Macaca_nemestrina
MGP_PahariEiJ_G0025588	Exd1	60	72.443	ENSMLEG00000033153	EXD1	97	76.140	Mandrillus_leucophaeus
MGP_PahariEiJ_G0025588	Exd1	61	38.806	ENSMAMG00000006592	exd1	71	38.806	Mastacembelus_armatus
MGP_PahariEiJ_G0025588	Exd1	69	38.710	ENSMZEG00005009193	-	75	38.710	Maylandia_zebra
MGP_PahariEiJ_G0025588	Exd1	66	46.582	ENSMGAG00000011179	EXD1	98	46.582	Meleagris_gallopavo
MGP_PahariEiJ_G0025588	Exd1	100	79.298	ENSMAUG00000002698	Exd1	100	79.298	Mesocricetus_auratus
MGP_PahariEiJ_G0025588	Exd1	99	71.204	ENSMICG00000014337	EXD1	99	71.204	Microcebus_murinus
MGP_PahariEiJ_G0025588	Exd1	100	75.306	ENSMOCG00000018151	Exd1	100	75.306	Microtus_ochrogaster
MGP_PahariEiJ_G0025588	Exd1	89	59.351	ENSMODG00000000164	EXD1	99	59.351	Monodelphis_domestica
MGP_PahariEiJ_G0025588	Exd1	68	38.071	ENSMALG00000015814	-	87	38.025	Monopterus_albus
MGP_PahariEiJ_G0025588	Exd1	100	88.772	MGP_CAROLIEiJ_G0024145	Exd1	100	88.772	Mus_caroli
MGP_PahariEiJ_G0025588	Exd1	100	88.772	ENSMUSG00000048647	Exd1	100	88.772	Mus_musculus
MGP_PahariEiJ_G0025588	Exd1	100	88.947	MGP_SPRETEiJ_G0025061	Exd1	100	88.947	Mus_spretus
MGP_PahariEiJ_G0025588	Exd1	99	69.391	ENSMPUG00000008811	EXD1	100	69.391	Mustela_putorius_furo
MGP_PahariEiJ_G0025588	Exd1	92	66.730	ENSMLUG00000001466	EXD1	99	66.730	Myotis_lucifugus
MGP_PahariEiJ_G0025588	Exd1	100	72.680	ENSNGAG00000002319	Exd1	100	72.680	Nannospalax_galili
MGP_PahariEiJ_G0025588	Exd1	99	65.043	ENSNLEG00000003456	EXD1	99	65.043	Nomascus_leucogenys
MGP_PahariEiJ_G0025588	Exd1	88	56.464	ENSOPRG00000016433	EXD1	99	56.464	Ochotona_princeps
MGP_PahariEiJ_G0025588	Exd1	66	38.601	ENSONIG00000012043	-	97	38.601	Oreochromis_niloticus
MGP_PahariEiJ_G0025588	Exd1	89	65.166	ENSOCUG00000013817	EXD1	100	65.166	Oryctolagus_cuniculus
MGP_PahariEiJ_G0025588	Exd1	68	38.287	ENSORLG00000026344	-	74	37.783	Oryzias_latipes
MGP_PahariEiJ_G0025588	Exd1	69	37.685	ENSORLG00020005465	-	76	37.685	Oryzias_latipes_hni
MGP_PahariEiJ_G0025588	Exd1	69	37.376	ENSORLG00015004848	-	76	37.376	Oryzias_latipes_hsok
MGP_PahariEiJ_G0025588	Exd1	66	39.481	ENSOMEG00000019812	-	77	38.821	Oryzias_melastigma
MGP_PahariEiJ_G0025588	Exd1	89	60.385	ENSOGAG00000013095	EXD1	99	60.577	Otolemur_garnettii
MGP_PahariEiJ_G0025588	Exd1	99	68.651	ENSOARG00000020330	EXD1	99	68.651	Ovis_aries
MGP_PahariEiJ_G0025588	Exd1	99	68.651	ENSPPAG00000033760	EXD1	99	68.651	Pan_paniscus
MGP_PahariEiJ_G0025588	Exd1	99	70.053	ENSPPRG00000011128	EXD1	99	70.506	Panthera_pardus
MGP_PahariEiJ_G0025588	Exd1	99	69.930	ENSPTIG00000020026	EXD1	99	70.383	Panthera_tigris_altaica
MGP_PahariEiJ_G0025588	Exd1	99	68.827	ENSPTRG00000006941	EXD1	99	68.827	Pan_troglodytes
MGP_PahariEiJ_G0025588	Exd1	99	69.056	ENSPANG00000019000	EXD1	99	69.056	Papio_anubis
MGP_PahariEiJ_G0025588	Exd1	67	39.589	ENSPKIG00000000671	-	70	39.589	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0025588	Exd1	98	47.387	ENSPSIG00000014473	EXD1	92	47.561	Pelodiscus_sinensis
MGP_PahariEiJ_G0025588	Exd1	70	35.417	ENSPMGG00000015466	-	79	35.417	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0025588	Exd1	71	67.470	ENSPCIG00000027845	EXD1	83	67.470	Phascolarctos_cinereus
MGP_PahariEiJ_G0025588	Exd1	67	38.442	ENSPFOG00000013673	-	96	38.442	Poecilia_formosa
MGP_PahariEiJ_G0025588	Exd1	67	38.832	ENSPLAG00000014262	-	71	38.832	Poecilia_latipinna
MGP_PahariEiJ_G0025588	Exd1	67	39.086	ENSPMEG00000012071	-	71	39.086	Poecilia_mexicana
MGP_PahariEiJ_G0025588	Exd1	68	39.401	ENSPREG00000019468	-	97	33.686	Poecilia_reticulata
MGP_PahariEiJ_G0025588	Exd1	87	66.865	ENSPPYG00000006369	EXD1	98	66.865	Pongo_abelii
MGP_PahariEiJ_G0025588	Exd1	71	61.026	ENSPCAG00000005269	-	75	61.282	Procavia_capensis
MGP_PahariEiJ_G0025588	Exd1	99	67.247	ENSPCOG00000026598	EXD1	99	68.411	Propithecus_coquereli
MGP_PahariEiJ_G0025588	Exd1	87	68.263	ENSPVAG00000003149	EXD1	98	68.263	Pteropus_vampyrus
MGP_PahariEiJ_G0025588	Exd1	69	39.225	ENSPNAG00000008931	exd1	80	39.225	Pygocentrus_nattereri
MGP_PahariEiJ_G0025588	Exd1	100	82.105	ENSRNOG00000025360	Exd1	100	82.105	Rattus_norvegicus
MGP_PahariEiJ_G0025588	Exd1	60	77.557	ENSRBIG00000037257	EXD1	100	77.557	Rhinopithecus_bieti
MGP_PahariEiJ_G0025588	Exd1	99	68.706	ENSRROG00000034491	EXD1	99	68.706	Rhinopithecus_roxellana
MGP_PahariEiJ_G0025588	Exd1	99	60.490	ENSSBOG00000024842	EXD1	99	60.490	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0025588	Exd1	89	59.542	ENSSHAG00000016701	EXD1	97	59.542	Sarcophilus_harrisii
MGP_PahariEiJ_G0025588	Exd1	56	37.459	ENSSFOG00015016852	-	83	37.459	Scleropages_formosus
MGP_PahariEiJ_G0025588	Exd1	69	41.250	ENSSDUG00000004368	exd1	67	41.500	Seriola_dumerili
MGP_PahariEiJ_G0025588	Exd1	85	64.490	ENSSARG00000009556	-	98	64.215	Sorex_araneus
MGP_PahariEiJ_G0025588	Exd1	83	50.557	ENSSPUG00000001716	EXD1	73	50.557	Sphenodon_punctatus
MGP_PahariEiJ_G0025588	Exd1	99	69.512	ENSSSCG00000004752	EXD1	99	69.512	Sus_scrofa
MGP_PahariEiJ_G0025588	Exd1	66	35.128	ENSTNIG00000017431	-	93	35.128	Tetraodon_nigroviridis
MGP_PahariEiJ_G0025588	Exd1	72	56.599	ENSTBEG00000003085	EXD1	93	56.599	Tupaia_belangeri
MGP_PahariEiJ_G0025588	Exd1	87	67.530	ENSTTRG00000009809	EXD1	97	67.530	Tursiops_truncatus
MGP_PahariEiJ_G0025588	Exd1	99	70.435	ENSUMAG00000012170	EXD1	100	70.435	Ursus_maritimus
MGP_PahariEiJ_G0025588	Exd1	88	67.188	ENSVPAG00000007758	EXD1	99	67.188	Vicugna_pacos
MGP_PahariEiJ_G0025588	Exd1	99	67.130	ENSVVUG00000026704	EXD1	100	67.130	Vulpes_vulpes
MGP_PahariEiJ_G0025588	Exd1	67	43.147	ENSXETG00000017895	exd1	95	43.147	Xenopus_tropicalis
MGP_PahariEiJ_G0025588	Exd1	56	37.576	ENSXCOG00000010879	-	84	37.576	Xiphophorus_couchianus
MGP_PahariEiJ_G0025588	Exd1	61	38.701	ENSXMAG00000014462	-	86	37.538	Xiphophorus_maculatus