EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0025648 (Gene tree)
Gene ID: 110318421
Gene Symbol: Patl2
Alias: 4930424G05Rik|Pat1a
Full Name: PAT1 homolog 2
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 71436 bases
Position: chr3:105571850-105643285
Accession: 110318421
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0065207	PAT1	PF09770.9	1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0065207	-	2413	XM_021193469	MGP_PahariEiJ_P0065207	530 (aa)	XP_021049128	-

Gene Model

Click here to download MGP_PahariEiJ_G0025648's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0025648's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0025648	Patl2	100	68.240	ENSG00000229474	PATL2	96	79.412	Homo_sapiens
MGP_PahariEiJ_G0025648	Patl2	90	40.310	ENSAPOG00000022988	patl2	74	39.341	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0025648	Patl2	89	72.222	ENSAMEG00000014997	PATL2	93	71.429	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0025648	Patl2	78	43.839	ENSAOCG00000023738	patl2	53	43.365	Amphiprion_ocellaris
MGP_PahariEiJ_G0025648	Patl2	78	42.891	ENSAPEG00000011299	patl2	64	42.823	Amphiprion_percula
MGP_PahariEiJ_G0025648	Patl2	78	42.654	ENSATEG00000019567	patl2	63	42.080	Anabas_testudineus
MGP_PahariEiJ_G0025648	Patl2	88	46.525	ENSAPLG00000003980	PATL2	83	45.946	Anas_platyrhynchos
MGP_PahariEiJ_G0025648	Patl2	52	37.586	ENSAPLG00000013394	PATL1	59	37.716	Anas_platyrhynchos
MGP_PahariEiJ_G0025648	Patl2	62	51.632	ENSACAG00000006951	-	97	48.901	Anolis_carolinensis
MGP_PahariEiJ_G0025648	Patl2	100	67.273	ENSANAG00000022701	PATL2	97	67.273	Aotus_nancymaae
MGP_PahariEiJ_G0025648	Patl2	81	42.411	ENSACLG00000010326	patl2	59	41.518	Astatotilapia_calliptera
MGP_PahariEiJ_G0025648	Patl2	78	43.780	ENSAMXG00000020293	patl2	60	42.488	Astyanax_mexicanus
MGP_PahariEiJ_G0025648	Patl2	64	75.588	ENSBTAG00000001558	PATL2	95	75.588	Bos_taurus
MGP_PahariEiJ_G0025648	Patl2	100	67.091	ENSCJAG00000002379	PATL2	97	67.455	Callithrix_jacchus
MGP_PahariEiJ_G0025648	Patl2	98	68.635	ENSCAFG00000013629	PATL2	97	67.712	Canis_familiaris
MGP_PahariEiJ_G0025648	Patl2	98	68.773	ENSCAFG00020022169	PATL2	96	67.844	Canis_lupus_dingo
MGP_PahariEiJ_G0025648	Patl2	99	64.516	ENSCHIG00000026665	PATL2	96	64.794	Capra_hircus
MGP_PahariEiJ_G0025648	Patl2	100	65.756	ENSTSYG00000032456	PATL2	97	65.574	Carlito_syrichta
MGP_PahariEiJ_G0025648	Patl2	98	65.913	ENSCPOG00000002922	PATL2	100	65.913	Cavia_porcellus
MGP_PahariEiJ_G0025648	Patl2	100	67.399	ENSCCAG00000025261	PATL2	98	67.949	Cebus_capucinus
MGP_PahariEiJ_G0025648	Patl2	100	68.000	ENSCATG00000034794	PATL2	96	79.118	Cercocebus_atys
MGP_PahariEiJ_G0025648	Patl2	98	67.946	ENSCLAG00000014407	PATL2	99	66.920	Chinchilla_lanigera
MGP_PahariEiJ_G0025648	Patl2	98	68.022	ENSCSAG00000009601	PATL2	97	68.207	Chlorocebus_sabaeus
MGP_PahariEiJ_G0025648	Patl2	65	36.975	ENSCSAG00000006095	PATL1	51	36.975	Chlorocebus_sabaeus
MGP_PahariEiJ_G0025648	Patl2	65	37.255	ENSCHOG00000001611	PATL1	57	37.255	Choloepus_hoffmanni
MGP_PahariEiJ_G0025648	Patl2	83	52.252	ENSCPBG00000006150	PATL2	65	52.027	Chrysemys_picta_bellii
MGP_PahariEiJ_G0025648	Patl2	53	31.879	ENSCSAVG00000002430	-	76	31.864	Ciona_savignyi
MGP_PahariEiJ_G0025648	Patl2	100	68.431	ENSCANG00000013856	PATL2	97	68.613	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0025648	Patl2	98	77.586	ENSCGRG00001010801	Patl2	100	78.352	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0025648	Patl2	98	77.586	ENSCGRG00000013007	Patl2	100	78.352	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0025648	Patl2	93	39.238	ENSCSEG00000009438	patl2	73	38.889	Cynoglossus_semilaevis
MGP_PahariEiJ_G0025648	Patl2	78	37.678	ENSCVAG00000016203	patl2	62	36.170	Cyprinodon_variegatus
MGP_PahariEiJ_G0025648	Patl2	88	41.139	ENSDARG00000089567	patl2	63	40.506	Danio_rerio
MGP_PahariEiJ_G0025648	Patl2	65	36.695	ENSDNOG00000038865	PATL1	64	36.695	Dasypus_novemcinctus
MGP_PahariEiJ_G0025648	Patl2	100	67.384	ENSDNOG00000036837	PATL2	92	66.487	Dasypus_novemcinctus
MGP_PahariEiJ_G0025648	Patl2	97	65.830	ENSDORG00000026649	Patl2	99	66.214	Dipodomys_ordii
MGP_PahariEiJ_G0025648	Patl2	64	72.941	ENSETEG00000005068	PATL2	96	73.824	Echinops_telfairi
MGP_PahariEiJ_G0025648	Patl2	99	66.544	ENSEASG00005017984	PATL2	97	65.441	Equus_asinus_asinus
MGP_PahariEiJ_G0025648	Patl2	99	68.324	ENSECAG00000013462	PATL2	97	68.692	Equus_caballus
MGP_PahariEiJ_G0025648	Patl2	77	45.585	ENSELUG00000023244	patl2	56	43.855	Esox_lucius
MGP_PahariEiJ_G0025648	Patl2	100	68.081	ENSFCAG00000027170	PATL2	97	66.790	Felis_catus
MGP_PahariEiJ_G0025648	Patl2	81	51.253	ENSFALG00000009768	PATL2	60	51.253	Ficedula_albicollis
MGP_PahariEiJ_G0025648	Patl2	98	66.092	ENSFDAG00000012242	PATL2	100	65.209	Fukomys_damarensis
MGP_PahariEiJ_G0025648	Patl2	58	40.705	ENSFHEG00000009727	patl2	59	40.328	Fundulus_heteroclitus
MGP_PahariEiJ_G0025648	Patl2	78	40.559	ENSGMOG00000005666	patl2	98	40.528	Gadus_morhua
MGP_PahariEiJ_G0025648	Patl2	78	52.758	ENSGALG00000002167	PATL2	52	52.278	Gallus_gallus
MGP_PahariEiJ_G0025648	Patl2	78	43.897	ENSGAFG00000019344	patl2	58	42.857	Gambusia_affinis
MGP_PahariEiJ_G0025648	Patl2	73	36.228	ENSGAGG00000004461	PATL1	51	37.709	Gopherus_agassizii
MGP_PahariEiJ_G0025648	Patl2	100	67.818	ENSGGOG00000025923	PATL2	97	68.182	Gorilla_gorilla
MGP_PahariEiJ_G0025648	Patl2	81	42.568	ENSHBUG00000005929	patl2	67	42.117	Haplochromis_burtoni
MGP_PahariEiJ_G0025648	Patl2	98	65.784	ENSHGLG00000017415	-	100	65.784	Heterocephalus_glaber_female
MGP_PahariEiJ_G0025648	Patl2	98	66.352	ENSHGLG00100008419	-	100	66.352	Heterocephalus_glaber_male
MGP_PahariEiJ_G0025648	Patl2	78	43.427	ENSHCOG00000016754	patl2	57	42.488	Hippocampus_comes
MGP_PahariEiJ_G0025648	Patl2	80	42.299	ENSIPUG00000020692	patl2	60	42.299	Ictalurus_punctatus
MGP_PahariEiJ_G0025648	Patl2	100	68.297	ENSSTOG00000033848	PATL2	97	68.297	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0025648	Patl2	82	41.410	ENSKMAG00000021275	patl2	60	40.088	Kryptolebias_marmoratus
MGP_PahariEiJ_G0025648	Patl2	83	40.717	ENSLBEG00000022344	patl2	62	39.831	Labrus_bergylta
MGP_PahariEiJ_G0025648	Patl2	86	41.615	ENSLACG00000005291	-	61	41.408	Latimeria_chalumnae
MGP_PahariEiJ_G0025648	Patl2	98	66.224	ENSLAFG00000031124	PATL2	98	66.224	Loxodonta_africana
MGP_PahariEiJ_G0025648	Patl2	100	67.942	ENSMFAG00000003565	PATL2	97	68.901	Macaca_fascicularis
MGP_PahariEiJ_G0025648	Patl2	64	78.824	ENSMMUG00000014294	PATL2	96	78.824	Macaca_mulatta
MGP_PahariEiJ_G0025648	Patl2	100	68.182	ENSMNEG00000034510	PATL2	97	68.773	Macaca_nemestrina
MGP_PahariEiJ_G0025648	Patl2	100	68.364	ENSMLEG00000042248	PATL2	97	68.000	Mandrillus_leucophaeus
MGP_PahariEiJ_G0025648	Patl2	78	42.446	ENSMAMG00000013327	patl2	63	41.388	Mastacembelus_armatus
MGP_PahariEiJ_G0025648	Patl2	81	42.411	ENSMZEG00005014292	patl2	59	41.518	Maylandia_zebra
MGP_PahariEiJ_G0025648	Patl2	86	45.833	ENSMGAG00000001309	PATL2	81	46.230	Meleagris_gallopavo
MGP_PahariEiJ_G0025648	Patl2	100	77.256	ENSMAUG00000001008	Patl2	98	77.820	Mesocricetus_auratus
MGP_PahariEiJ_G0025648	Patl2	64	78.529	ENSMICG00000005037	PATL2	96	78.529	Microcebus_murinus
MGP_PahariEiJ_G0025648	Patl2	100	78.343	ENSMOCG00000015367	Patl2	100	77.778	Microtus_ochrogaster
MGP_PahariEiJ_G0025648	Patl2	80	34.004	ENSMMOG00000013711	patl1	50	36.441	Mola_mola
MGP_PahariEiJ_G0025648	Patl2	78	38.095	ENSMMOG00000001299	patl2	61	37.381	Mola_mola
MGP_PahariEiJ_G0025648	Patl2	89	65.432	ENSMODG00000017690	PATL2	87	62.450	Monodelphis_domestica
MGP_PahariEiJ_G0025648	Patl2	78	43.160	ENSMALG00000008131	patl2	54	42.217	Monopterus_albus
MGP_PahariEiJ_G0025648	Patl2	65	37.255	ENSMALG00000018706	patl1	51	37.255	Monopterus_albus
MGP_PahariEiJ_G0025648	Patl2	100	94.925	MGP_CAROLIEiJ_G0024205	Patl2	100	95.113	Mus_caroli
MGP_PahariEiJ_G0025648	Patl2	98	94.808	ENSMUSG00000027233	Patl2	98	94.808	Mus_musculus
MGP_PahariEiJ_G0025648	Patl2	100	94.727	MGP_SPRETEiJ_G0025122	Patl2	100	94.915	Mus_spretus
MGP_PahariEiJ_G0025648	Patl2	97	65.505	ENSNGAG00000020368	Patl2	99	64.404	Nannospalax_galili
MGP_PahariEiJ_G0025648	Patl2	81	42.117	ENSNBRG00000011745	patl2	63	41.667	Neolamprologus_brichardi
MGP_PahariEiJ_G0025648	Patl2	100	68.864	ENSNLEG00000005673	PATL2	97	68.914	Nomascus_leucogenys
MGP_PahariEiJ_G0025648	Patl2	65	37.255	ENSOPRG00000007963	PATL1	54	37.255	Ochotona_princeps
MGP_PahariEiJ_G0025648	Patl2	81	42.316	ENSONIG00000011519	patl2	59	41.425	Oreochromis_niloticus
MGP_PahariEiJ_G0025648	Patl2	65	37.430	ENSOANG00000011117	-	87	37.430	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0025648	Patl2	84	59.020	ENSOANG00000001538	-	100	58.352	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0025648	Patl2	98	68.130	ENSOCUG00000006339	PATL2	99	67.932	Oryctolagus_cuniculus
MGP_PahariEiJ_G0025648	Patl2	78	42.488	ENSORLG00000005780	patl2	56	42.254	Oryzias_latipes
MGP_PahariEiJ_G0025648	Patl2	81	41.556	ENSORLG00020016506	patl2	58	41.333	Oryzias_latipes_hni
MGP_PahariEiJ_G0025648	Patl2	78	42.488	ENSORLG00015014500	patl2	56	42.254	Oryzias_latipes_hsok
MGP_PahariEiJ_G0025648	Patl2	74	42.928	ENSOMEG00000021628	patl2	60	42.141	Oryzias_melastigma
MGP_PahariEiJ_G0025648	Patl2	99	66.667	ENSOGAG00000004709	PATL2	97	66.296	Otolemur_garnettii
MGP_PahariEiJ_G0025648	Patl2	98	63.977	ENSOARG00000003762	PATL2	98	63.977	Ovis_aries
MGP_PahariEiJ_G0025648	Patl2	100	67.812	ENSPPAG00000007221	PATL2	97	67.993	Pan_paniscus
MGP_PahariEiJ_G0025648	Patl2	100	67.772	ENSPPRG00000004279	PATL2	97	66.483	Panthera_pardus
MGP_PahariEiJ_G0025648	Patl2	100	67.897	ENSPTIG00000018964	PATL2	97	66.605	Panthera_tigris_altaica
MGP_PahariEiJ_G0025648	Patl2	100	67.993	ENSPTRG00000041536	PATL2	97	68.174	Pan_troglodytes
MGP_PahariEiJ_G0025648	Patl2	100	67.942	ENSPANG00000018026	PATL2	97	68.529	Papio_anubis
MGP_PahariEiJ_G0025648	Patl2	74	44.307	ENSPKIG00000016887	patl2	60	41.886	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0025648	Patl2	91	46.016	ENSPSIG00000017690	PATL2	98	48.762	Pelodiscus_sinensis
MGP_PahariEiJ_G0025648	Patl2	82	40.135	ENSPMGG00000014550	patl2	68	39.686	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0025648	Patl2	98	80.577	ENSPEMG00000016509	Patl2	98	80.577	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0025648	Patl2	89	62.947	ENSPCIG00000018256	PATL2	92	60.041	Phascolarctos_cinereus
MGP_PahariEiJ_G0025648	Patl2	78	43.897	ENSPFOG00000007305	patl2	57	42.958	Poecilia_formosa
MGP_PahariEiJ_G0025648	Patl2	78	43.897	ENSPLAG00000020713	patl2	57	42.958	Poecilia_latipinna
MGP_PahariEiJ_G0025648	Patl2	78	43.897	ENSPMEG00000018942	patl2	57	42.958	Poecilia_mexicana
MGP_PahariEiJ_G0025648	Patl2	65	42.897	ENSPREG00000023066	patl2	55	42.500	Poecilia_reticulata
MGP_PahariEiJ_G0025648	Patl2	100	68.097	ENSPCOG00000000295	PATL2	96	78.824	Propithecus_coquereli
MGP_PahariEiJ_G0025648	Patl2	59	33.028	ENSPVAG00000015239	PATL1	50	31.875	Pteropus_vampyrus
MGP_PahariEiJ_G0025648	Patl2	81	42.342	ENSPNYG00000017381	patl2	67	41.892	Pundamilia_nyererei
MGP_PahariEiJ_G0025648	Patl2	78	43.230	ENSPNAG00000002315	patl2	59	42.757	Pygocentrus_nattereri
MGP_PahariEiJ_G0025648	Patl2	98	87.669	ENSRNOG00000017061	Patl2	98	87.476	Rattus_norvegicus
MGP_PahariEiJ_G0025648	Patl2	100	67.636	ENSRBIG00000040369	PATL2	97	68.182	Rhinopithecus_bieti
MGP_PahariEiJ_G0025648	Patl2	100	67.636	ENSRROG00000028786	PATL2	97	68.364	Rhinopithecus_roxellana
MGP_PahariEiJ_G0025648	Patl2	100	65.818	ENSSBOG00000034766	PATL2	98	66.727	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0025648	Patl2	88	41.423	ENSSFOG00015000720	patl2	62	41.545	Scleropages_formosus
MGP_PahariEiJ_G0025648	Patl2	89	40.289	ENSSMAG00000017262	patl2	79	38.690	Scophthalmus_maximus
MGP_PahariEiJ_G0025648	Patl2	81	41.518	ENSSDUG00000022927	patl2	59	40.179	Seriola_dumerili
MGP_PahariEiJ_G0025648	Patl2	78	41.882	ENSSLDG00000017922	patl2	53	44.318	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0025648	Patl2	92	65.314	ENSSARG00000009047	PATL2	95	66.596	Sorex_araneus
MGP_PahariEiJ_G0025648	Patl2	64	55.814	ENSSPUG00000019065	PATL2	97	55.523	Sphenodon_punctatus
MGP_PahariEiJ_G0025648	Patl2	78	41.121	ENSSPAG00000004784	patl2	62	40.559	Stegastes_partitus
MGP_PahariEiJ_G0025648	Patl2	73	34.913	ENSSSCG00000013124	PATL1	53	36.415	Sus_scrofa
MGP_PahariEiJ_G0025648	Patl2	72	52.713	ENSTGUG00000004619	-	98	52.455	Taeniopygia_guttata
MGP_PahariEiJ_G0025648	Patl2	77	43.645	ENSTRUG00000005647	patl2	58	42.686	Takifugu_rubripes
MGP_PahariEiJ_G0025648	Patl2	65	36.975	ENSTTRG00000009389	PATL1	54	36.975	Tursiops_truncatus
MGP_PahariEiJ_G0025648	Patl2	100	67.928	ENSUAMG00000018533	PATL2	97	68.108	Ursus_americanus
MGP_PahariEiJ_G0025648	Patl2	100	67.928	ENSUMAG00000007738	PATL2	97	68.108	Ursus_maritimus
MGP_PahariEiJ_G0025648	Patl2	73	34.663	ENSUMAG00000018634	PATL1	52	36.592	Ursus_maritimus
MGP_PahariEiJ_G0025648	Patl2	96	68.927	ENSVVUG00000011576	PATL2	96	67.797	Vulpes_vulpes
MGP_PahariEiJ_G0025648	Patl2	73	35.162	ENSVVUG00000016668	PATL1	51	36.695	Vulpes_vulpes
MGP_PahariEiJ_G0025648	Patl2	74	45.161	ENSXETG00000014167	patl2	68	44.076	Xenopus_tropicalis
MGP_PahariEiJ_G0025648	Patl2	73	36.139	ENSXCOG00000010808	patl1	63	37.396	Xiphophorus_couchianus
MGP_PahariEiJ_G0025648	Patl2	78	43.897	ENSXMAG00000018464	patl2	56	42.958	Xiphophorus_maculatus