EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0025668 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 23987 bases
Position: chr3:108370607-108394593
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0065287	RRM_1	PF00076.22	5.4e-23	1	2
MGP_PahariEiJ_P0065287	RRM_1	PF00076.22	5.4e-23	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0065287	-	1214	-	MGP_PahariEiJ_P0065287	358 (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0025668's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0025668's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0025668	-	77	50.804	MGP_PahariEiJ_G0020418	Hnrnpm	71	57.609
MGP_PahariEiJ_G0025668	-	99	98.571	MGP_PahariEiJ_G0025667	Myef2	85	98.571

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0025668	-	98	90.625	ENSG00000104177	MYEF2	97	92.727	Homo_sapiens
MGP_PahariEiJ_G0025668	-	71	63.265	ENSAPOG00000015050	myef2	74	59.249	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0025668	-	89	90.625	ENSAMEG00000001964	MYEF2	78	88.571	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0025668	-	72	64.068	ENSACIG00000020446	myef2	67	62.821	Amphilophus_citrinellus
MGP_PahariEiJ_G0025668	-	73	62.914	ENSAOCG00000017431	myef2	74	59.538	Amphiprion_ocellaris
MGP_PahariEiJ_G0025668	-	73	62.583	ENSAPEG00000024834	myef2	74	59.249	Amphiprion_percula
MGP_PahariEiJ_G0025668	-	72	64.041	ENSATEG00000017892	myef2	78	57.221	Anabas_testudineus
MGP_PahariEiJ_G0025668	-	83	72.695	ENSAPLG00000008935	MYEF2	84	67.143	Anas_platyrhynchos
MGP_PahariEiJ_G0025668	-	94	72.000	ENSACAG00000004806	MYEF2	75	69.014	Anolis_carolinensis
MGP_PahariEiJ_G0025668	-	98	92.188	ENSANAG00000036558	MYEF2	82	90.000	Aotus_nancymaae
MGP_PahariEiJ_G0025668	-	65	67.293	ENSACLG00000017421	myef2	78	64.646	Astatotilapia_calliptera
MGP_PahariEiJ_G0025668	-	70	63.415	ENSAMXG00000038244	myef2	75	61.889	Astyanax_mexicanus
MGP_PahariEiJ_G0025668	-	98	90.625	ENSBTAG00000008771	MYEF2	87	88.571	Bos_taurus
MGP_PahariEiJ_G0025668	-	98	90.625	ENSCJAG00000001875	MYEF2	83	88.571	Callithrix_jacchus
MGP_PahariEiJ_G0025668	-	86	89.062	ENSCAFG00000014008	MYEF2	99	65.166	Canis_familiaris
MGP_PahariEiJ_G0025668	-	98	90.625	ENSCHIG00000022164	MYEF2	86	88.571	Capra_hircus
MGP_PahariEiJ_G0025668	-	98	93.750	ENSTSYG00000010575	MYEF2	82	91.429	Carlito_syrichta
MGP_PahariEiJ_G0025668	-	89	87.097	ENSCAPG00000017762	MYEF2	96	63.208	Cavia_aperea
MGP_PahariEiJ_G0025668	-	97	87.097	ENSCPOG00000010584	MYEF2	96	61.557	Cavia_porcellus
MGP_PahariEiJ_G0025668	-	98	92.188	ENSCCAG00000033878	MYEF2	82	90.000	Cebus_capucinus
MGP_PahariEiJ_G0025668	-	98	90.625	ENSCATG00000039268	MYEF2	82	88.571	Cercocebus_atys
MGP_PahariEiJ_G0025668	-	97	91.803	ENSCLAG00000008328	MYEF2	84	87.143	Chinchilla_lanigera
MGP_PahariEiJ_G0025668	-	98	90.625	ENSCSAG00000010366	MYEF2	79	88.571	Chlorocebus_sabaeus
MGP_PahariEiJ_G0025668	-	95	76.364	ENSCPBG00000024789	MYEF2	96	69.737	Chrysemys_picta_bellii
MGP_PahariEiJ_G0025668	-	98	90.625	ENSCANG00000022275	MYEF2	83	88.571	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0025668	-	99	95.714	ENSCGRG00001024080	-	83	95.714	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0025668	-	87	95.714	ENSCGRG00000012257	-	81	95.714	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0025668	-	68	64.085	ENSCSEG00000005597	myef2	71	60.245	Cynoglossus_semilaevis
MGP_PahariEiJ_G0025668	-	82	54.286	ENSDARG00000059398	myef2	68	58.228	Danio_rerio
MGP_PahariEiJ_G0025668	-	96	89.655	ENSDNOG00000038711	MYEF2	82	84.286	Dasypus_novemcinctus
MGP_PahariEiJ_G0025668	-	83	91.935	ENSDORG00000015835	-	77	88.571	Dipodomys_ordii
MGP_PahariEiJ_G0025668	-	61	84.615	ENSETEG00000005360	MYEF2	70	81.429	Echinops_telfairi
MGP_PahariEiJ_G0025668	-	54	54.237	ENSEBUG00000016563	myef2	53	52.362	Eptatretus_burgeri
MGP_PahariEiJ_G0025668	-	98	89.062	ENSEASG00005017818	MYEF2	87	87.143	Equus_asinus_asinus
MGP_PahariEiJ_G0025668	-	98	89.062	ENSECAG00000005741	MYEF2	82	87.143	Equus_caballus
MGP_PahariEiJ_G0025668	-	98	89.062	ENSECAG00000034546	-	79	87.143	Equus_caballus
MGP_PahariEiJ_G0025668	-	65	63.971	ENSELUG00000003712	myef2	57	63.918	Esox_lucius
MGP_PahariEiJ_G0025668	-	98	92.188	ENSFCAG00000027198	MYEF2	82	90.000	Felis_catus
MGP_PahariEiJ_G0025668	-	82	73.585	ENSFALG00000011565	MYEF2	82	68.571	Ficedula_albicollis
MGP_PahariEiJ_G0025668	-	85	91.935	ENSFDAG00000007098	MYEF2	81	88.571	Fukomys_damarensis
MGP_PahariEiJ_G0025668	-	80	57.009	ENSFHEG00000002386	myef2	71	56.509	Fundulus_heteroclitus
MGP_PahariEiJ_G0025668	-	65	63.774	ENSGMOG00000008489	myef2	71	56.973	Gadus_morhua
MGP_PahariEiJ_G0025668	-	84	74.138	ENSGALG00000032546	MYEF2	86	67.143	Gallus_gallus
MGP_PahariEiJ_G0025668	-	72	60.825	ENSGAFG00000005838	myef2	69	60.065	Gambusia_affinis
MGP_PahariEiJ_G0025668	-	71	63.668	ENSGACG00000016759	myef2	67	64.912	Gasterosteus_aculeatus
MGP_PahariEiJ_G0025668	-	95	76.364	ENSGAGG00000015265	MYEF2	96	69.737	Gopherus_agassizii
MGP_PahariEiJ_G0025668	-	98	90.625	ENSGGOG00000014968	MYEF2	82	88.571	Gorilla_gorilla
MGP_PahariEiJ_G0025668	-	72	64.483	ENSHBUG00000015847	myef2	67	63.192	Haplochromis_burtoni
MGP_PahariEiJ_G0025668	-	97	91.935	ENSHGLG00000018166	MYEF2	82	88.571	Heterocephalus_glaber_female
MGP_PahariEiJ_G0025668	-	83	91.935	ENSHGLG00100014102	MYEF2	77	88.571	Heterocephalus_glaber_male
MGP_PahariEiJ_G0025668	-	72	61.017	ENSHCOG00000001652	myef2	72	59.104	Hippocampus_comes
MGP_PahariEiJ_G0025668	-	74	61.695	ENSIPUG00000018589	myef2	67	61.695	Ictalurus_punctatus
MGP_PahariEiJ_G0025668	-	85	92.188	ENSSTOG00000007740	MYEF2	81	90.000	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0025668	-	84	92.188	ENSJJAG00000015428	-	77	90.000	Jaculus_jaculus
MGP_PahariEiJ_G0025668	-	72	64.261	ENSKMAG00000002383	myef2	83	57.260	Kryptolebias_marmoratus
MGP_PahariEiJ_G0025668	-	67	63.100	ENSLBEG00000005649	myef2	73	56.286	Labrus_bergylta
MGP_PahariEiJ_G0025668	-	83	72.954	ENSLACG00000006382	MYEF2	69	71.379	Latimeria_chalumnae
MGP_PahariEiJ_G0025668	-	74	68.771	ENSLOCG00000013241	myef2	77	67.296	Lepisosteus_oculatus
MGP_PahariEiJ_G0025668	-	98	84.375	ENSLAFG00000012990	MYEF2	79	82.857	Loxodonta_africana
MGP_PahariEiJ_G0025668	-	98	90.625	ENSMFAG00000046361	MYEF2	83	88.571	Macaca_fascicularis
MGP_PahariEiJ_G0025668	-	98	90.625	ENSMMUG00000018834	MYEF2	83	88.571	Macaca_mulatta
MGP_PahariEiJ_G0025668	-	98	90.625	ENSMNEG00000028845	MYEF2	83	88.571	Macaca_nemestrina
MGP_PahariEiJ_G0025668	-	98	90.625	ENSMLEG00000038724	MYEF2	83	88.571	Mandrillus_leucophaeus
MGP_PahariEiJ_G0025668	-	69	65.603	ENSMAMG00000011476	myef2	84	60.360	Mastacembelus_armatus
MGP_PahariEiJ_G0025668	-	72	64.483	ENSMZEG00005011832	myef2	64	63.192	Maylandia_zebra
MGP_PahariEiJ_G0025668	-	82	73.145	ENSMGAG00000006915	MYEF2	84	67.143	Meleagris_gallopavo
MGP_PahariEiJ_G0025668	-	99	95.714	ENSMAUG00000019642	-	83	95.714	Mesocricetus_auratus
MGP_PahariEiJ_G0025668	-	98	90.625	ENSMICG00000014513	MYEF2	82	88.571	Microcebus_murinus
MGP_PahariEiJ_G0025668	-	99	94.286	ENSMOCG00000006917	-	82	94.286	Microtus_ochrogaster
MGP_PahariEiJ_G0025668	-	67	64.835	ENSMMOG00000021557	myef2	97	49.775	Mola_mola
MGP_PahariEiJ_G0025668	-	83	73.199	ENSMODG00000002744	MYEF2	54	68.101	Monodelphis_domestica
MGP_PahariEiJ_G0025668	-	59	66.518	ENSMALG00000012193	myef2	60	66.518	Monopterus_albus
MGP_PahariEiJ_G0025668	-	99	98.571	MGP_CAROLIEiJ_G0024222	Myef2	85	98.571	Mus_caroli
MGP_PahariEiJ_G0025668	-	99	98.571	ENSMUSG00000027201	Myef2	85	98.571	Mus_musculus
MGP_PahariEiJ_G0025668	-	99	98.413	ENSMUSG00000049230	Gm9833	80	98.571	Mus_musculus
MGP_PahariEiJ_G0025668	-	99	98.571	MGP_SPRETEiJ_G0025141	Myef2	85	98.571	Mus_spretus
MGP_PahariEiJ_G0025668	-	80	99.650	MGP_SPRETEiJ_G0025142	-	99	99.650	Mus_spretus
MGP_PahariEiJ_G0025668	-	86	89.062	ENSMPUG00000011254	MYEF2	65	87.143	Mustela_putorius_furo
MGP_PahariEiJ_G0025668	-	85	92.188	ENSMLUG00000006781	MYEF2	71	90.000	Myotis_lucifugus
MGP_PahariEiJ_G0025668	-	99	91.935	ENSNGAG00000010756	-	82	88.571	Nannospalax_galili
MGP_PahariEiJ_G0025668	-	65	67.293	ENSNBRG00000023602	myef2	93	65.789	Neolamprologus_brichardi
MGP_PahariEiJ_G0025668	-	98	90.625	ENSNLEG00000005951	MYEF2	82	88.571	Nomascus_leucogenys
MGP_PahariEiJ_G0025668	-	71	73.103	ENSMEUG00000015210	-	71	70.347	Notamacropus_eugenii
MGP_PahariEiJ_G0025668	-	89	64.433	ENSOPRG00000003919	MYEF2	56	71.676	Ochotona_princeps
MGP_PahariEiJ_G0025668	-	97	85.484	ENSODEG00000007463	MYEF2	82	82.857	Octodon_degus
MGP_PahariEiJ_G0025668	-	72	64.483	ENSONIG00000013374	myef2	82	55.789	Oreochromis_niloticus
MGP_PahariEiJ_G0025668	-	82	69.737	ENSOANG00000007375	MYEF2	77	66.767	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0025668	-	93	95.161	ENSOCUG00000013043	MYEF2	78	91.429	Oryctolagus_cuniculus
MGP_PahariEiJ_G0025668	-	72	62.543	ENSORLG00000002730	myef2	65	61.364	Oryzias_latipes
MGP_PahariEiJ_G0025668	-	75	61.513	ENSORLG00020021524	myef2	73	60.188	Oryzias_latipes_hni
MGP_PahariEiJ_G0025668	-	72	62.887	ENSORLG00015020877	myef2	65	61.688	Oryzias_latipes_hsok
MGP_PahariEiJ_G0025668	-	73	61.824	ENSOMEG00000010072	myef2	82	54.278	Oryzias_melastigma
MGP_PahariEiJ_G0025668	-	98	90.625	ENSOGAG00000010907	MYEF2	79	88.571	Otolemur_garnettii
MGP_PahariEiJ_G0025668	-	86	92.188	ENSOARG00000021027	MYEF2	77	90.000	Ovis_aries
MGP_PahariEiJ_G0025668	-	92	90.625	ENSPPAG00000041556	MYEF2	83	88.571	Pan_paniscus
MGP_PahariEiJ_G0025668	-	98	92.188	ENSPPRG00000011446	MYEF2	82	90.000	Panthera_pardus
MGP_PahariEiJ_G0025668	-	85	92.188	ENSPTIG00000018122	MYEF2	77	90.000	Panthera_tigris_altaica
MGP_PahariEiJ_G0025668	-	98	90.625	ENSPTRG00000007042	MYEF2	83	88.571	Pan_troglodytes
MGP_PahariEiJ_G0025668	-	98	90.625	ENSPANG00000017757	MYEF2	83	88.571	Papio_anubis
MGP_PahariEiJ_G0025668	-	66	66.667	ENSPKIG00000018344	MYEF2	71	65.188	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0025668	-	85	76.364	ENSPSIG00000016637	MYEF2	80	74.286	Pelodiscus_sinensis
MGP_PahariEiJ_G0025668	-	68	60.791	ENSPMGG00000001513	myef2	64	58.416	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0025668	-	85	95.714	ENSPEMG00000006286	-	80	95.714	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0025668	-	96	86.207	ENSPCIG00000022902	MYEF2	91	81.429	Phascolarctos_cinereus
MGP_PahariEiJ_G0025668	-	72	60.825	ENSPFOG00000001754	myef2	71	53.908	Poecilia_formosa
MGP_PahariEiJ_G0025668	-	72	60.825	ENSPLAG00000001538	myef2	77	54.348	Poecilia_latipinna
MGP_PahariEiJ_G0025668	-	65	63.433	ENSPLAG00000001814	MYEF2	75	55.942	Poecilia_latipinna
MGP_PahariEiJ_G0025668	-	72	60.825	ENSPMEG00000014250	myef2	77	54.348	Poecilia_mexicana
MGP_PahariEiJ_G0025668	-	72	60.825	ENSPMEG00000014953	MYEF2	77	54.348	Poecilia_mexicana
MGP_PahariEiJ_G0025668	-	72	61.672	ENSPREG00000010801	myef2	95	51.168	Poecilia_reticulata
MGP_PahariEiJ_G0025668	-	98	90.625	ENSPPYG00000006452	MYEF2	79	88.571	Pongo_abelii
MGP_PahariEiJ_G0025668	-	98	82.812	ENSPCAG00000016660	MYEF2	80	81.429	Procavia_capensis
MGP_PahariEiJ_G0025668	-	98	90.625	ENSPCOG00000024570	MYEF2	82	88.571	Propithecus_coquereli
MGP_PahariEiJ_G0025668	-	98	92.188	ENSPVAG00000004102	MYEF2	75	90.000	Pteropus_vampyrus
MGP_PahariEiJ_G0025668	-	65	66.917	ENSPNYG00000010879	myef2	68	65.789	Pundamilia_nyererei
MGP_PahariEiJ_G0025668	-	80	59.568	ENSPNAG00000026387	myef2	69	58.651	Pygocentrus_nattereri
MGP_PahariEiJ_G0025668	-	99	98.571	ENSRNOG00000005258	Myef2	79	98.571	Rattus_norvegicus
MGP_PahariEiJ_G0025668	-	98	90.625	ENSRBIG00000037503	MYEF2	83	88.571	Rhinopithecus_bieti
MGP_PahariEiJ_G0025668	-	98	90.625	ENSRROG00000042861	MYEF2	83	88.571	Rhinopithecus_roxellana
MGP_PahariEiJ_G0025668	-	85	92.188	ENSSBOG00000029634	MYEF2	82	90.000	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0025668	-	83	89.091	ENSSHAG00000011695	MYEF2	84	84.286	Sarcophilus_harrisii
MGP_PahariEiJ_G0025668	-	64	60.833	ENSSFOG00015017915	myef2	67	53.199	Scleropages_formosus
MGP_PahariEiJ_G0025668	-	86	65.614	ENSSFOG00015012981	myef2	90	57.260	Scleropages_formosus
MGP_PahariEiJ_G0025668	-	65	66.917	ENSSMAG00000021279	myef2	67	65.724	Scophthalmus_maximus
MGP_PahariEiJ_G0025668	-	74	62.829	ENSSDUG00000015983	myef2	78	61.682	Seriola_dumerili
MGP_PahariEiJ_G0025668	-	66	89.062	ENSSARG00000003264	MYEF2	74	87.143	Sorex_araneus
MGP_PahariEiJ_G0025668	-	84	74.394	ENSSPUG00000011966	MYEF2	76	70.588	Sphenodon_punctatus
MGP_PahariEiJ_G0025668	-	71	63.481	ENSSPAG00000021514	myef2	76	59.760	Stegastes_partitus
MGP_PahariEiJ_G0025668	-	98	92.188	ENSSSCG00000004661	MYEF2	82	88.571	Sus_scrofa
MGP_PahariEiJ_G0025668	-	82	72.222	ENSTGUG00000007130	MYEF2	82	67.143	Taeniopygia_guttata
MGP_PahariEiJ_G0025668	-	65	67.803	ENSTRUG00000016967	myef2	59	66.192	Takifugu_rubripes
MGP_PahariEiJ_G0025668	-	72	63.918	ENSTNIG00000009526	myef2	73	58.357	Tetraodon_nigroviridis
MGP_PahariEiJ_G0025668	-	95	92.188	ENSTTRG00000008076	MYEF2	78	90.000	Tursiops_truncatus
MGP_PahariEiJ_G0025668	-	97	91.935	ENSUAMG00000020099	MYEF2	87	88.571	Ursus_americanus
MGP_PahariEiJ_G0025668	-	96	90.625	ENSUMAG00000009804	MYEF2	82	88.571	Ursus_maritimus
MGP_PahariEiJ_G0025668	-	85	92.188	ENSVPAG00000004721	MYEF2	77	90.000	Vicugna_pacos
MGP_PahariEiJ_G0025668	-	85	90.625	ENSVVUG00000014591	MYEF2	77	88.571	Vulpes_vulpes
MGP_PahariEiJ_G0025668	-	89	67.820	ENSXETG00000018412	myef2	75	63.939	Xenopus_tropicalis
MGP_PahariEiJ_G0025668	-	72	61.458	ENSXMAG00000016686	myef2	68	60.656	Xiphophorus_maculatus