EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
MGP_PahariEiJ_G0025696 (Gene tree)
Gene ID
110318471
Gene Symbol
Ciao1
Alias
Wdr39
Full Name
cytosolic iron-sulfur assembly component 1
Gene Type
protein_coding
Species
Mus_pahari
Status
putative
Strand
Minus strand
Length
4797 bases
Position
chr3:110418154-110422950
Accession
110318471
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_PahariEiJ_P0065403eIF2APF08662.110.0002411
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_PahariEiJ_T0065401-1020-MGP_PahariEiJ_P0065401339 (aa)XP_021049204UPI000A306B13
MGP_PahariEiJ_T0065402-581--- (aa)--
MGP_PahariEiJ_T0065403-531-MGP_PahariEiJ_P0065403176 (aa)--
MGP_PahariEiJ_T0065404-409-MGP_PahariEiJ_P006540451 (aa)--
Gene Model
Click here to download MGP_PahariEiJ_G0025696's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0025696's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_PahariEiJ_G0025696Ciao18839.474MGP_PahariEiJ_G0031323Poc1b6431.683
MGP_PahariEiJ_G0025696Ciao17838.000MGP_PahariEiJ_G0015485Poc1a8038.000
MGP_PahariEiJ_G0025696Ciao18237.755MGP_PahariEiJ_G0024800Wdr58937.755
MGP_PahariEiJ_G0025696Ciao18233.333MGP_PahariEiJ_G0016413Wdr5b8433.333
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_PahariEiJ_G0025696Ciao19964.072ENSCING00000006781-9964.072Ciona_intestinalis
MGP_PahariEiJ_G0025696Ciao19962.874ENSCSAVG00000003355-9962.874Ciona_savignyi
MGP_PahariEiJ_G0025696Ciao19996.571ENSCGRG00001016622Ciao19996.571Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0025696Ciao19479.518ENSMZEG00005010812ciao110079.518Maylandia_zebra
MGP_PahariEiJ_G0025696Ciao19996.571ENSMAUG00000021994Ciao19996.571Mesocricetus_auratus
MGP_PahariEiJ_G0025696Ciao110096.591ENSMOCG00000009518Ciao19996.591Microtus_ochrogaster
MGP_PahariEiJ_G0025696Ciao110082.530ENSMALG00000002097ciao19982.530Monopterus_albus
MGP_PahariEiJ_G0025696Ciao110097.727MGP_CAROLIEiJ_G0024251Ciao110097.727Mus_caroli
MGP_PahariEiJ_G0025696Ciao110097.159ENSMUSG00000003662Ciao110097.159Mus_musculus
MGP_PahariEiJ_G0025696Ciao110097.159MGP_SPRETEiJ_G0025171Ciao110097.159Mus_spretus
MGP_PahariEiJ_G0025696Ciao19996.000ENSPEMG00000015800Ciao19996.000Peromyscus_maniculatus_bairdii

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us