EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0025721 (Gene tree)
Gene ID: 110319221
Gene Symbol: Zc3h8
Alias: E130108N08Rik|Fliz1
Full Name: zinc finger CCCH-type containing 8
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 17945 bases
Position: chr3:112123950-112141894
Accession: 110319221
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0065496	zf-CCCH	PF00642.24	1.2e-10	1	2
MGP_PahariEiJ_P0065496	zf-CCCH	PF00642.24	1.2e-10	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0065496	-	1624	XM_021194678	MGP_PahariEiJ_P0065496	305 (aa)	XP_021050337	UPI000A311DFC

Gene Model

Click here to download MGP_PahariEiJ_G0025721's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0025721's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0025721	Zc3h8	100	74.754	ENSG00000144161	ZC3H8	100	74.754	Homo_sapiens
MGP_PahariEiJ_G0025721	Zc3h8	81	76.829	ENSAMEG00000016207	ZC3H8	99	76.829	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0025721	Zc3h8	100	71.895	ENSANAG00000022151	ZC3H8	100	71.895	Aotus_nancymaae
MGP_PahariEiJ_G0025721	Zc3h8	99	70.395	ENSBTAG00000015965	ZC3H8	99	70.395	Bos_taurus
MGP_PahariEiJ_G0025721	Zc3h8	100	71.148	ENSCJAG00000040629	ZC3H8	100	71.895	Callithrix_jacchus
MGP_PahariEiJ_G0025721	Zc3h8	99	75.987	ENSCAFG00000007155	ZC3H8	77	75.987	Canis_familiaris
MGP_PahariEiJ_G0025721	Zc3h8	99	75.987	ENSCAFG00020017540	ZC3H8	92	75.987	Canis_lupus_dingo
MGP_PahariEiJ_G0025721	Zc3h8	99	67.732	ENSCHIG00000012152	ZC3H8	99	67.732	Capra_hircus
MGP_PahariEiJ_G0025721	Zc3h8	99	77.632	ENSTSYG00000006668	ZC3H8	99	77.632	Carlito_syrichta
MGP_PahariEiJ_G0025721	Zc3h8	91	72.302	ENSCPOG00000008258	ZC3H8	99	72.302	Cavia_porcellus
MGP_PahariEiJ_G0025721	Zc3h8	100	69.508	ENSCCAG00000034286	-	100	69.508	Cebus_capucinus
MGP_PahariEiJ_G0025721	Zc3h8	100	71.569	ENSCCAG00000019771	-	100	71.569	Cebus_capucinus
MGP_PahariEiJ_G0025721	Zc3h8	100	73.443	ENSCATG00000031295	ZC3H8	100	74.510	Cercocebus_atys
MGP_PahariEiJ_G0025721	Zc3h8	100	72.078	ENSCLAG00000006848	ZC3H8	100	72.078	Chinchilla_lanigera
MGP_PahariEiJ_G0025721	Zc3h8	85	71.815	ENSCSAG00000016801	ZC3H8	98	73.077	Chlorocebus_sabaeus
MGP_PahariEiJ_G0025721	Zc3h8	90	62.319	ENSCHOG00000010391	ZC3H8	98	62.319	Choloepus_hoffmanni
MGP_PahariEiJ_G0025721	Zc3h8	100	57.051	ENSCANG00000014691	ZC3H8	100	57.051	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0025721	Zc3h8	100	89.216	ENSCGRG00001018353	Zc3h8	100	89.216	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0025721	Zc3h8	100	89.216	ENSCGRG00000016191	Zc3h8	100	89.216	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0025721	Zc3h8	100	72.876	ENSDORG00000029341	Zc3h8	100	72.876	Dipodomys_ordii
MGP_PahariEiJ_G0025721	Zc3h8	79	72.727	ENSETEG00000016560	ZC3H8	81	72.727	Echinops_telfairi
MGP_PahariEiJ_G0025721	Zc3h8	99	76.645	ENSEASG00005006490	ZC3H8	99	77.303	Equus_asinus_asinus
MGP_PahariEiJ_G0025721	Zc3h8	99	75.987	ENSECAG00000022765	ZC3H8	99	76.974	Equus_caballus
MGP_PahariEiJ_G0025721	Zc3h8	99	67.869	ENSEEUG00000006984	ZC3H8	99	67.869	Erinaceus_europaeus
MGP_PahariEiJ_G0025721	Zc3h8	99	73.548	ENSFCAG00000008088	ZC3H8	99	74.516	Felis_catus
MGP_PahariEiJ_G0025721	Zc3h8	100	73.377	ENSFDAG00000001021	ZC3H8	100	73.377	Fukomys_damarensis
MGP_PahariEiJ_G0025721	Zc3h8	100	73.770	ENSGGOG00000009004	ZC3H8	100	73.770	Gorilla_gorilla
MGP_PahariEiJ_G0025721	Zc3h8	100	70.607	ENSHGLG00000008367	ZC3H8	100	70.607	Heterocephalus_glaber_female
MGP_PahariEiJ_G0025721	Zc3h8	55	79.290	ENSHGLG00100017277	-	100	79.290	Heterocephalus_glaber_male
MGP_PahariEiJ_G0025721	Zc3h8	100	77.124	ENSSTOG00000006347	ZC3H8	100	77.124	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0025721	Zc3h8	99	74.342	ENSLAFG00000004675	ZC3H8	99	74.342	Loxodonta_africana
MGP_PahariEiJ_G0025721	Zc3h8	100	73.770	ENSMFAG00000031522	ZC3H8	100	74.837	Macaca_fascicularis
MGP_PahariEiJ_G0025721	Zc3h8	100	74.098	ENSMMUG00000044163	ZC3H8	100	75.163	Macaca_mulatta
MGP_PahariEiJ_G0025721	Zc3h8	100	73.770	ENSMNEG00000034502	ZC3H8	100	74.837	Macaca_nemestrina
MGP_PahariEiJ_G0025721	Zc3h8	100	73.115	ENSMLEG00000029980	ZC3H8	100	74.183	Mandrillus_leucophaeus
MGP_PahariEiJ_G0025721	Zc3h8	100	87.582	ENSMAUG00000012509	Zc3h8	100	87.582	Mesocricetus_auratus
MGP_PahariEiJ_G0025721	Zc3h8	100	77.124	ENSMICG00000045551	ZC3H8	100	78.105	Microcebus_murinus
MGP_PahariEiJ_G0025721	Zc3h8	100	86.557	ENSMOCG00000015035	Zc3h8	100	86.557	Microtus_ochrogaster
MGP_PahariEiJ_G0025721	Zc3h8	100	97.049	MGP_CAROLIEiJ_G0024276	Zc3h8	100	97.049	Mus_caroli
MGP_PahariEiJ_G0025721	Zc3h8	100	97.377	ENSMUSG00000027387	Zc3h8	100	97.377	Mus_musculus
MGP_PahariEiJ_G0025721	Zc3h8	100	97.377	MGP_SPRETEiJ_G0025196	Zc3h8	100	97.377	Mus_spretus
MGP_PahariEiJ_G0025721	Zc3h8	99	75.161	ENSMPUG00000009562	ZC3H8	99	75.161	Mustela_putorius_furo
MGP_PahariEiJ_G0025721	Zc3h8	90	68.929	ENSMLUG00000004890	ZC3H8	100	69.504	Myotis_lucifugus
MGP_PahariEiJ_G0025721	Zc3h8	100	83.333	ENSNGAG00000010427	Zc3h8	100	83.333	Nannospalax_galili
MGP_PahariEiJ_G0025721	Zc3h8	100	76.066	ENSNLEG00000001619	ZC3H8	100	76.066	Nomascus_leucogenys
MGP_PahariEiJ_G0025721	Zc3h8	90	67.636	ENSOPRG00000011183	ZC3H8	99	67.636	Ochotona_princeps
MGP_PahariEiJ_G0025721	Zc3h8	100	72.549	ENSODEG00000006594	ZC3H8	100	72.549	Octodon_degus
MGP_PahariEiJ_G0025721	Zc3h8	99	73.597	ENSOCUG00000011253	ZC3H8	88	73.597	Oryctolagus_cuniculus
MGP_PahariEiJ_G0025721	Zc3h8	100	72.436	ENSOGAG00000002554	ZC3H8	100	72.436	Otolemur_garnettii
MGP_PahariEiJ_G0025721	Zc3h8	99	71.711	ENSOARG00000014475	ZC3H8	99	71.711	Ovis_aries
MGP_PahariEiJ_G0025721	Zc3h8	100	74.426	ENSPPAG00000028071	ZC3H8	100	74.426	Pan_paniscus
MGP_PahariEiJ_G0025721	Zc3h8	99	73.871	ENSPPRG00000005648	ZC3H8	99	74.839	Panthera_pardus
MGP_PahariEiJ_G0025721	Zc3h8	99	73.871	ENSPTIG00000016697	ZC3H8	99	74.839	Panthera_tigris_altaica
MGP_PahariEiJ_G0025721	Zc3h8	100	74.426	ENSPTRG00000012362	ZC3H8	100	74.426	Pan_troglodytes
MGP_PahariEiJ_G0025721	Zc3h8	100	73.443	ENSPANG00000016995	ZC3H8	100	74.510	Papio_anubis
MGP_PahariEiJ_G0025721	Zc3h8	97	84.314	ENSPEMG00000011068	Zc3h8	97	84.314	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0025721	Zc3h8	99	74.342	ENSPPYG00000012165	ZC3H8	99	74.342	Pongo_abelii
MGP_PahariEiJ_G0025721	Zc3h8	100	56.209	ENSPCAG00000015426	ZC3H8	100	56.209	Procavia_capensis
MGP_PahariEiJ_G0025721	Zc3h8	100	78.758	ENSPCOG00000021690	ZC3H8	100	78.758	Propithecus_coquereli
MGP_PahariEiJ_G0025721	Zc3h8	74	77.515	ENSPVAG00000003510	ZC3H8	76	77.515	Pteropus_vampyrus
MGP_PahariEiJ_G0025721	Zc3h8	100	90.164	ENSRNOG00000017647	Zc3h8	100	90.164	Rattus_norvegicus
MGP_PahariEiJ_G0025721	Zc3h8	100	74.510	ENSRBIG00000027345	ZC3H8	100	74.510	Rhinopithecus_bieti
MGP_PahariEiJ_G0025721	Zc3h8	100	74.837	ENSRROG00000039459	ZC3H8	100	74.837	Rhinopithecus_roxellana
MGP_PahariEiJ_G0025721	Zc3h8	100	68.910	ENSSBOG00000028167	ZC3H8	100	68.910	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0025721	Zc3h8	91	68.100	ENSSARG00000012883	ZC3H8	99	68.100	Sorex_araneus
MGP_PahariEiJ_G0025721	Zc3h8	85	72.137	ENSSSCG00000008099	ZC3H8	97	72.519	Sus_scrofa
MGP_PahariEiJ_G0025721	Zc3h8	59	80.000	ENSTBEG00000015547	-	67	80.000	Tupaia_belangeri
MGP_PahariEiJ_G0025721	Zc3h8	85	74.525	ENSTTRG00000013153	ZC3H8	85	74.525	Tursiops_truncatus
MGP_PahariEiJ_G0025721	Zc3h8	99	76.316	ENSUAMG00000002411	ZC3H8	99	76.316	Ursus_americanus
MGP_PahariEiJ_G0025721	Zc3h8	99	77.303	ENSUMAG00000008665	ZC3H8	99	77.303	Ursus_maritimus
MGP_PahariEiJ_G0025721	Zc3h8	100	75.817	ENSVPAG00000005911	ZC3H8	100	76.471	Vicugna_pacos
MGP_PahariEiJ_G0025721	Zc3h8	99	75.658	ENSVVUG00000028659	ZC3H8	99	75.658	Vulpes_vulpes