EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0025723 (Gene tree)
Gene ID: 110318219
Gene Symbol: Zc3h6
Alias: 4631426G04Rik|4833425H18Rik
Full Name: zinc finger CCCH-type containing 6
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 53076 bases
Position: chr3:112156668-112209743
Accession: 110318219
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0065498	zf-CCCH	PF00642.24	2.8e-11	1	2
MGP_PahariEiJ_P0065498	zf-CCCH	PF00642.24	2.8e-11	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0065499	-	1484	-	MGP_PahariEiJ_P0065499	150 (aa)	-	-
MGP_PahariEiJ_T0065498	-	4919	XM_021193064	MGP_PahariEiJ_P0065498	1176 (aa)	XP_021048723	UPI000A306DEB

Gene Model

Click here to download MGP_PahariEiJ_G0025723's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0025723's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0025723	Zc3h6	65	49.770	MGP_PahariEiJ_G0021089	Zc3h4	82	32.618

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0025723	Zc3h6	100	76.071	ENSG00000188177	ZC3H6	100	76.071	Homo_sapiens
MGP_PahariEiJ_G0025723	Zc3h6	61	66.667	ENSAPOG00000002681	zc3h6	90	43.400	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0025723	Zc3h6	100	72.964	ENSAMEG00000016194	ZC3H6	100	72.964	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0025723	Zc3h6	61	66.321	ENSACIG00000021843	zc3h6	84	42.247	Amphilophus_citrinellus
MGP_PahariEiJ_G0025723	Zc3h6	61	66.667	ENSAOCG00000004039	zc3h6	90	43.273	Amphiprion_ocellaris
MGP_PahariEiJ_G0025723	Zc3h6	61	66.667	ENSAPEG00000014561	zc3h6	90	42.909	Amphiprion_percula
MGP_PahariEiJ_G0025723	Zc3h6	79	41.236	ENSATEG00000019063	zc3h6	84	45.511	Anabas_testudineus
MGP_PahariEiJ_G0025723	Zc3h6	99	57.225	ENSAPLG00000014287	ZC3H6	99	57.925	Anas_platyrhynchos
MGP_PahariEiJ_G0025723	Zc3h6	100	75.755	ENSANAG00000024229	ZC3H6	100	75.755	Aotus_nancymaae
MGP_PahariEiJ_G0025723	Zc3h6	100	75.923	ENSCJAG00000016479	ZC3H6	100	75.923	Callithrix_jacchus
MGP_PahariEiJ_G0025723	Zc3h6	100	73.025	ENSCAFG00000007160	ZC3H6	100	72.353	Canis_familiaris
MGP_PahariEiJ_G0025723	Zc3h6	100	71.345	ENSCAFG00020017525	ZC3H6	100	70.672	Canis_lupus_dingo
MGP_PahariEiJ_G0025723	Zc3h6	81	69.948	ENSCHIG00000019719	-	97	69.948	Capra_hircus
MGP_PahariEiJ_G0025723	Zc3h6	100	75.903	ENSTSYG00000031857	ZC3H6	100	75.903	Carlito_syrichta
MGP_PahariEiJ_G0025723	Zc3h6	99	71.344	ENSCPOG00000003445	ZC3H6	100	72.109	Cavia_porcellus
MGP_PahariEiJ_G0025723	Zc3h6	100	76.555	ENSCATG00000036595	ZC3H6	100	76.555	Cercocebus_atys
MGP_PahariEiJ_G0025723	Zc3h6	90	74.019	ENSCLAG00000006605	ZC3H6	99	74.299	Chinchilla_lanigera
MGP_PahariEiJ_G0025723	Zc3h6	90	75.398	ENSCSAG00000016793	ZC3H6	99	75.398	Chlorocebus_sabaeus
MGP_PahariEiJ_G0025723	Zc3h6	99	76.421	ENSCANG00000041036	ZC3H6	100	76.421	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0025723	Zc3h6	99	81.927	ENSCGRG00001022022	Zc3h6	99	81.927	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0025723	Zc3h6	99	84.872	ENSCGRG00000016162	Zc3h6	100	84.872	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0025723	Zc3h6	67	55.556	ENSCSEG00000012267	zc3h6	86	50.637	Cynoglossus_semilaevis
MGP_PahariEiJ_G0025723	Zc3h6	99	67.120	ENSDNOG00000044811	ZC3H6	100	67.290	Dasypus_novemcinctus
MGP_PahariEiJ_G0025723	Zc3h6	99	72.774	ENSDORG00000013967	Zc3h6	100	72.434	Dipodomys_ordii
MGP_PahariEiJ_G0025723	Zc3h6	83	73.562	ENSEASG00005006493	ZC3H6	99	73.562	Equus_asinus_asinus
MGP_PahariEiJ_G0025723	Zc3h6	100	74.727	ENSECAG00000023620	ZC3H6	100	74.727	Equus_caballus
MGP_PahariEiJ_G0025723	Zc3h6	82	67.045	ENSEEUG00000013883	-	83	66.667	Erinaceus_europaeus
MGP_PahariEiJ_G0025723	Zc3h6	100	73.866	ENSFCAG00000008089	ZC3H6	100	73.866	Felis_catus
MGP_PahariEiJ_G0025723	Zc3h6	99	57.095	ENSFALG00000011589	ZC3H6	99	57.465	Ficedula_albicollis
MGP_PahariEiJ_G0025723	Zc3h6	99	74.873	ENSFDAG00000002521	ZC3H6	99	75.042	Fukomys_damarensis
MGP_PahariEiJ_G0025723	Zc3h6	99	57.190	ENSGALG00000008269	ZC3H6	98	58.216	Gallus_gallus
MGP_PahariEiJ_G0025723	Zc3h6	61	60.622	ENSGAFG00000006771	zc3h6	77	60.000	Gambusia_affinis
MGP_PahariEiJ_G0025723	Zc3h6	61	64.583	ENSGACG00000005343	zc3h6	92	43.148	Gasterosteus_aculeatus
MGP_PahariEiJ_G0025723	Zc3h6	99	58.794	ENSGAGG00000010857	ZC3H6	99	58.878	Gopherus_agassizii
MGP_PahariEiJ_G0025723	Zc3h6	100	76.322	ENSGGOG00000001665	ZC3H6	100	76.322	Gorilla_gorilla
MGP_PahariEiJ_G0025723	Zc3h6	99	74.555	ENSHGLG00000011882	ZC3H6	96	74.979	Heterocephalus_glaber_female
MGP_PahariEiJ_G0025723	Zc3h6	99	72.959	ENSHGLG00100002559	ZC3H6	100	73.129	Heterocephalus_glaber_male
MGP_PahariEiJ_G0025723	Zc3h6	82	42.553	ENSHCOG00000012519	zc3h6	87	45.299	Hippocampus_comes
MGP_PahariEiJ_G0025723	Zc3h6	90	73.664	ENSSTOG00000008120	-	99	73.946	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0025723	Zc3h6	100	76.178	ENSJJAG00000013206	Zc3h6	100	76.599	Jaculus_jaculus
MGP_PahariEiJ_G0025723	Zc3h6	61	64.583	ENSKMAG00000016252	zc3h6	85	46.072	Kryptolebias_marmoratus
MGP_PahariEiJ_G0025723	Zc3h6	58	64.249	ENSLBEG00000003054	zc3h6	84	41.280	Labrus_bergylta
MGP_PahariEiJ_G0025723	Zc3h6	99	46.383	ENSLACG00000012014	ZC3H6	100	47.064	Latimeria_chalumnae
MGP_PahariEiJ_G0025723	Zc3h6	100	43.102	ENSLOCG00000016548	zc3h6	98	43.407	Lepisosteus_oculatus
MGP_PahariEiJ_G0025723	Zc3h6	93	69.455	ENSLAFG00000001151	ZC3H6	98	69.091	Loxodonta_africana
MGP_PahariEiJ_G0025723	Zc3h6	100	76.723	ENSMFAG00000036963	ZC3H6	100	76.723	Macaca_fascicularis
MGP_PahariEiJ_G0025723	Zc3h6	100	76.639	ENSMMUG00000016430	ZC3H6	100	76.639	Macaca_mulatta
MGP_PahariEiJ_G0025723	Zc3h6	100	76.471	ENSMNEG00000031225	ZC3H6	100	76.471	Macaca_nemestrina
MGP_PahariEiJ_G0025723	Zc3h6	100	76.639	ENSMLEG00000038821	ZC3H6	100	76.639	Mandrillus_leucophaeus
MGP_PahariEiJ_G0025723	Zc3h6	67	56.061	ENSMAMG00000021546	zc3h6	98	38.231	Mastacembelus_armatus
MGP_PahariEiJ_G0025723	Zc3h6	99	57.190	ENSMGAG00000003025	ZC3H6	99	58.134	Meleagris_gallopavo
MGP_PahariEiJ_G0025723	Zc3h6	100	84.335	ENSMAUG00000017009	Zc3h6	100	84.335	Mesocricetus_auratus
MGP_PahariEiJ_G0025723	Zc3h6	100	76.322	ENSMICG00000036353	ZC3H6	100	76.322	Microcebus_murinus
MGP_PahariEiJ_G0025723	Zc3h6	100	83.616	ENSMOCG00000002054	Zc3h6	100	83.616	Microtus_ochrogaster
MGP_PahariEiJ_G0025723	Zc3h6	99	61.069	ENSMODG00000006612	ZC3H6	100	61.069	Monodelphis_domestica
MGP_PahariEiJ_G0025723	Zc3h6	61	64.975	ENSMALG00000002048	zc3h6	98	39.100	Monopterus_albus
MGP_PahariEiJ_G0025723	Zc3h6	100	93.458	MGP_CAROLIEiJ_G0024278	Zc3h6	100	93.458	Mus_caroli
MGP_PahariEiJ_G0025723	Zc3h6	100	94.647	ENSMUSG00000042851	Zc3h6	100	94.647	Mus_musculus
MGP_PahariEiJ_G0025723	Zc3h6	100	94.647	MGP_SPRETEiJ_G0025198	Zc3h6	100	94.647	Mus_spretus
MGP_PahariEiJ_G0025723	Zc3h6	90	71.215	ENSMPUG00000009624	ZC3H6	99	71.682	Mustela_putorius_furo
MGP_PahariEiJ_G0025723	Zc3h6	99	69.664	ENSMLUG00000004896	ZC3H6	99	70.084	Myotis_lucifugus
MGP_PahariEiJ_G0025723	Zc3h6	94	75.693	ENSNGAG00000013596	Zc3h6	99	75.964	Nannospalax_galili
MGP_PahariEiJ_G0025723	Zc3h6	59	66.667	ENSNBRG00000015382	zc3h6	84	42.472	Neolamprologus_brichardi
MGP_PahariEiJ_G0025723	Zc3h6	99	75.550	ENSNLEG00000033657	ZC3H6	99	75.550	Nomascus_leucogenys
MGP_PahariEiJ_G0025723	Zc3h6	100	70.648	ENSOPRG00000012717	ZC3H6	100	70.732	Ochotona_princeps
MGP_PahariEiJ_G0025723	Zc3h6	94	72.752	ENSODEG00000009099	ZC3H6	99	73.190	Octodon_degus
MGP_PahariEiJ_G0025723	Zc3h6	61	66.154	ENSONIG00000009880	zc3h6	90	41.889	Oreochromis_niloticus
MGP_PahariEiJ_G0025723	Zc3h6	99	62.848	ENSOANG00000012054	-	96	63.269	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0025723	Zc3h6	95	73.251	ENSOCUG00000011125	ZC3H6	99	73.109	Oryctolagus_cuniculus
MGP_PahariEiJ_G0025723	Zc3h6	61	67.188	ENSORLG00000011179	zc3h6	86	44.468	Oryzias_latipes
MGP_PahariEiJ_G0025723	Zc3h6	61	67.188	ENSORLG00020017202	zc3h6	86	44.468	Oryzias_latipes_hni
MGP_PahariEiJ_G0025723	Zc3h6	61	67.708	ENSORLG00015001664	zc3h6	86	44.350	Oryzias_latipes_hsok
MGP_PahariEiJ_G0025723	Zc3h6	82	45.824	ENSOMEG00000001296	zc3h6	86	47.679	Oryzias_melastigma
MGP_PahariEiJ_G0025723	Zc3h6	99	75.275	ENSOGAG00000002556	ZC3H6	100	75.275	Otolemur_garnettii
MGP_PahariEiJ_G0025723	Zc3h6	100	71.141	ENSOARG00000014503	ZC3H6	100	71.141	Ovis_aries
MGP_PahariEiJ_G0025723	Zc3h6	99	76.017	ENSPPAG00000030495	ZC3H6	100	76.017	Pan_paniscus
MGP_PahariEiJ_G0025723	Zc3h6	100	73.866	ENSPPRG00000005673	ZC3H6	100	73.866	Panthera_pardus
MGP_PahariEiJ_G0025723	Zc3h6	99	72.489	ENSPTIG00000015800	ZC3H6	99	72.489	Panthera_tigris_altaica
MGP_PahariEiJ_G0025723	Zc3h6	100	76.238	ENSPTRG00000012363	ZC3H6	100	76.238	Pan_troglodytes
MGP_PahariEiJ_G0025723	Zc3h6	100	76.387	ENSPANG00000025224	ZC3H6	100	76.387	Papio_anubis
MGP_PahariEiJ_G0025723	Zc3h6	62	68.750	ENSPKIG00000007353	zc3h6	97	68.750	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0025723	Zc3h6	99	58.180	ENSPSIG00000002520	ZC3H6	100	59.141	Pelodiscus_sinensis
MGP_PahariEiJ_G0025723	Zc3h6	99	82.881	ENSPEMG00000000918	Zc3h6	100	82.881	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0025723	Zc3h6	90	62.685	ENSPCIG00000029741	ZC3H6	99	62.743	Phascolarctos_cinereus
MGP_PahariEiJ_G0025723	Zc3h6	61	64.583	ENSPFOG00000015748	zc3h6	86	46.452	Poecilia_formosa
MGP_PahariEiJ_G0025723	Zc3h6	61	64.583	ENSPLAG00000002469	zc3h6	86	46.452	Poecilia_latipinna
MGP_PahariEiJ_G0025723	Zc3h6	61	64.583	ENSPMEG00000020802	zc3h6	83	64.550	Poecilia_mexicana
MGP_PahariEiJ_G0025723	Zc3h6	66	62.376	ENSPREG00000023126	zc3h6	85	48.829	Poecilia_reticulata
MGP_PahariEiJ_G0025723	Zc3h6	78	67.819	ENSPCAG00000015468	ZC3H6	77	67.171	Procavia_capensis
MGP_PahariEiJ_G0025723	Zc3h6	100	76.154	ENSPCOG00000016627	ZC3H6	100	75.651	Propithecus_coquereli
MGP_PahariEiJ_G0025723	Zc3h6	69	89.109	ENSPVAG00000013728	ZC3H6	70	89.109	Pteropus_vampyrus
MGP_PahariEiJ_G0025723	Zc3h6	61	66.667	ENSPNYG00000018130	zc3h6	85	42.247	Pundamilia_nyererei
MGP_PahariEiJ_G0025723	Zc3h6	79	42.240	ENSPNAG00000009331	zc3h6	98	39.602	Pygocentrus_nattereri
MGP_PahariEiJ_G0025723	Zc3h6	100	90.855	ENSRNOG00000026277	Zc3h6	100	90.432	Rattus_norvegicus
MGP_PahariEiJ_G0025723	Zc3h6	100	75.923	ENSSBOG00000033489	ZC3H6	100	75.923	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0025723	Zc3h6	83	63.015	ENSSHAG00000016634	ZC3H6	100	63.015	Sarcophilus_harrisii
MGP_PahariEiJ_G0025723	Zc3h6	100	38.797	ENSSFOG00015004488	zc3h6	98	39.606	Scleropages_formosus
MGP_PahariEiJ_G0025723	Zc3h6	61	64.921	ENSSMAG00000008411	zc3h6	98	38.414	Scophthalmus_maximus
MGP_PahariEiJ_G0025723	Zc3h6	61	66.667	ENSSDUG00000006105	zc3h6	91	43.728	Seriola_dumerili
MGP_PahariEiJ_G0025723	Zc3h6	61	66.667	ENSSLDG00000021813	zc3h6	91	43.728	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0025723	Zc3h6	99	68.136	ENSSARG00000001035	ZC3H6	100	68.136	Sorex_araneus
MGP_PahariEiJ_G0025723	Zc3h6	61	60.630	ENSSPUG00000013031	-	79	31.631	Sphenodon_punctatus
MGP_PahariEiJ_G0025723	Zc3h6	100	74.790	ENSSSCG00000008096	ZC3H6	100	74.790	Sus_scrofa
MGP_PahariEiJ_G0025723	Zc3h6	99	56.302	ENSTGUG00000007468	ZC3H6	100	57.249	Taeniopygia_guttata
MGP_PahariEiJ_G0025723	Zc3h6	64	57.940	ENSTNIG00000016608	zc3h6	83	51.379	Tetraodon_nigroviridis
MGP_PahariEiJ_G0025723	Zc3h6	85	72.464	ENSTBEG00000016232	ZC3H6	91	72.464	Tupaia_belangeri
MGP_PahariEiJ_G0025723	Zc3h6	81	69.591	ENSTTRG00000013154	ZC3H6	82	69.591	Tursiops_truncatus
MGP_PahariEiJ_G0025723	Zc3h6	90	71.682	ENSUAMG00000002401	ZC3H6	99	71.776	Ursus_americanus
MGP_PahariEiJ_G0025723	Zc3h6	90	71.682	ENSUMAG00000008663	ZC3H6	99	72.874	Ursus_maritimus
MGP_PahariEiJ_G0025723	Zc3h6	99	72.989	ENSVPAG00000005912	ZC3H6	100	73.074	Vicugna_pacos
MGP_PahariEiJ_G0025723	Zc3h6	90	71.936	ENSVVUG00000028662	ZC3H6	99	72.030	Vulpes_vulpes
MGP_PahariEiJ_G0025723	Zc3h6	75	56.186	ENSXETG00000013762	zc3h6	86	57.143	Xenopus_tropicalis
MGP_PahariEiJ_G0025723	Zc3h6	55	62.376	ENSXCOG00000011662	zc3h6	76	52.222	Xiphophorus_couchianus
MGP_PahariEiJ_G0025723	Zc3h6	61	64.583	ENSXMAG00000020822	zc3h6	86	44.467	Xiphophorus_maculatus