EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0025789 (Gene tree)
Gene ID: 110318260
Gene Symbol: Trmt6
Alias: 3300001M20Rik
Full Name: tRNA methyltransferase 6
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 11066 bases
Position: chr3:115887449-115898514
Accession: 110318260
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0065799	Gcd10p	PF04189.13	2.6e-71	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0065798	-	4139	-	-	- (aa)	-	-
MGP_PahariEiJ_T0065801	-	596	-	-	- (aa)	-	-
MGP_PahariEiJ_T0065797	-	2938	-	-	- (aa)	-	-
MGP_PahariEiJ_T0065800	-	458	-	-	- (aa)	-	-
MGP_PahariEiJ_T0065799	-	2818	XM_021193134	MGP_PahariEiJ_P0065799	497 (aa)	XP_021048793	UPI000A308904
MGP_PahariEiJ_T0065802	-	609	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0025789's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0025789's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0025789	Trmt6	100	86.145	ENSG00000089195	TRMT6	100	86.145	Homo_sapiens
MGP_PahariEiJ_G0025789	Trmt6	96	58.281	ENSAPOG00000008036	trmt6	98	59.167	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0025789	Trmt6	100	86.345	ENSAMEG00000010635	TRMT6	100	86.345	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0025789	Trmt6	95	55.932	ENSACIG00000004608	trmt6	97	55.252	Amphilophus_citrinellus
MGP_PahariEiJ_G0025789	Trmt6	96	57.023	ENSAOCG00000024322	trmt6	98	56.667	Amphiprion_ocellaris
MGP_PahariEiJ_G0025789	Trmt6	96	59.119	ENSAPEG00000017334	trmt6	98	58.750	Amphiprion_percula
MGP_PahariEiJ_G0025789	Trmt6	91	58.425	ENSATEG00000018498	trmt6	97	59.519	Anabas_testudineus
MGP_PahariEiJ_G0025789	Trmt6	92	73.420	ENSAPLG00000007761	TRMT6	99	73.420	Anas_platyrhynchos
MGP_PahariEiJ_G0025789	Trmt6	96	67.223	ENSACAG00000000575	TRMT6	98	67.641	Anolis_carolinensis
MGP_PahariEiJ_G0025789	Trmt6	100	85.944	ENSANAG00000021260	TRMT6	100	85.944	Aotus_nancymaae
MGP_PahariEiJ_G0025789	Trmt6	95	57.143	ENSACLG00000026034	trmt6	95	57.143	Astatotilapia_calliptera
MGP_PahariEiJ_G0025789	Trmt6	96	58.958	ENSAMXG00000017116	trmt6	96	59.336	Astyanax_mexicanus
MGP_PahariEiJ_G0025789	Trmt6	99	86.263	ENSBTAG00000001314	TRMT6	99	86.263	Bos_taurus
MGP_PahariEiJ_G0025789	Trmt6	100	85.743	ENSCJAG00000021296	TRMT6	100	85.743	Callithrix_jacchus
MGP_PahariEiJ_G0025789	Trmt6	98	86.858	ENSCAFG00000005969	TRMT6	98	86.858	Canis_familiaris
MGP_PahariEiJ_G0025789	Trmt6	98	86.858	ENSCAFG00020000777	TRMT6	98	86.858	Canis_lupus_dingo
MGP_PahariEiJ_G0025789	Trmt6	99	85.859	ENSCHIG00000010338	TRMT6	99	85.859	Capra_hircus
MGP_PahariEiJ_G0025789	Trmt6	99	86.437	ENSTSYG00000004286	TRMT6	99	86.437	Carlito_syrichta
MGP_PahariEiJ_G0025789	Trmt6	83	85.507	ENSCAPG00000015467	TRMT6	93	85.507	Cavia_aperea
MGP_PahariEiJ_G0025789	Trmt6	99	84.615	ENSCPOG00000013809	TRMT6	99	84.615	Cavia_porcellus
MGP_PahariEiJ_G0025789	Trmt6	100	85.944	ENSCCAG00000026939	TRMT6	100	85.944	Cebus_capucinus
MGP_PahariEiJ_G0025789	Trmt6	100	85.743	ENSCATG00000041111	TRMT6	100	85.743	Cercocebus_atys
MGP_PahariEiJ_G0025789	Trmt6	100	85.141	ENSCLAG00000013978	TRMT6	100	85.141	Chinchilla_lanigera
MGP_PahariEiJ_G0025789	Trmt6	100	85.743	ENSCSAG00000013461	TRMT6	100	85.743	Chlorocebus_sabaeus
MGP_PahariEiJ_G0025789	Trmt6	83	75.749	ENSCHOG00000012537	TRMT6	74	75.749	Choloepus_hoffmanni
MGP_PahariEiJ_G0025789	Trmt6	95	74.477	ENSCPBG00000023406	TRMT6	97	74.477	Chrysemys_picta_bellii
MGP_PahariEiJ_G0025789	Trmt6	90	35.345	ENSCING00000002472	-	96	34.298	Ciona_intestinalis
MGP_PahariEiJ_G0025789	Trmt6	87	39.041	ENSCSAVG00000001680	-	94	38.353	Ciona_savignyi
MGP_PahariEiJ_G0025789	Trmt6	100	85.542	ENSCANG00000002381	TRMT6	100	85.542	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0025789	Trmt6	100	92.354	ENSCGRG00001003385	Trmt6	100	92.354	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0025789	Trmt6	100	92.354	ENSCGRG00000006540	Trmt6	100	92.354	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0025789	Trmt6	96	59.034	ENSCSEG00000002228	trmt6	97	59.158	Cynoglossus_semilaevis
MGP_PahariEiJ_G0025789	Trmt6	96	56.996	ENSCVAG00000000341	trmt6	98	56.996	Cyprinodon_variegatus
MGP_PahariEiJ_G0025789	Trmt6	97	58.299	ENSDARG00000042344	trmt6	97	58.299	Danio_rerio
MGP_PahariEiJ_G0025789	Trmt6	100	80.198	ENSDNOG00000012785	TRMT6	100	80.198	Dasypus_novemcinctus
MGP_PahariEiJ_G0025789	Trmt6	98	86.708	ENSDORG00000006458	Trmt6	99	86.708	Dipodomys_ordii
MGP_PahariEiJ_G0025789	Trmt6	88	31.034	FBgn0031832	CG9596	95	30.155	Drosophila_melanogaster
MGP_PahariEiJ_G0025789	Trmt6	60	91.667	ENSETEG00000003490	-	60	91.667	Echinops_telfairi
MGP_PahariEiJ_G0025789	Trmt6	65	49.691	ENSETEG00000017282	-	94	49.691	Echinops_telfairi
MGP_PahariEiJ_G0025789	Trmt6	97	87.318	ENSEASG00005001411	TRMT6	99	86.992	Equus_asinus_asinus
MGP_PahariEiJ_G0025789	Trmt6	97	86.694	ENSECAG00000023914	TRMT6	99	86.032	Equus_caballus
MGP_PahariEiJ_G0025789	Trmt6	99	83.838	ENSEEUG00000006635	TRMT6	99	83.838	Erinaceus_europaeus
MGP_PahariEiJ_G0025789	Trmt6	95	59.290	ENSELUG00000013378	trmt6	78	61.197	Esox_lucius
MGP_PahariEiJ_G0025789	Trmt6	99	87.018	ENSFCAG00000003102	TRMT6	99	87.018	Felis_catus
MGP_PahariEiJ_G0025789	Trmt6	90	73.673	ENSFALG00000013575	TRMT6	97	73.894	Ficedula_albicollis
MGP_PahariEiJ_G0025789	Trmt6	99	86.667	ENSFDAG00000015117	TRMT6	99	86.667	Fukomys_damarensis
MGP_PahariEiJ_G0025789	Trmt6	95	57.741	ENSFHEG00000019957	trmt6	97	57.741	Fundulus_heteroclitus
MGP_PahariEiJ_G0025789	Trmt6	81	64.567	ENSGMOG00000011059	trmt6	97	64.567	Gadus_morhua
MGP_PahariEiJ_G0025789	Trmt6	95	71.789	ENSGALG00000009169	TRMT6	97	71.789	Gallus_gallus
MGP_PahariEiJ_G0025789	Trmt6	96	56.341	ENSGAFG00000008618	trmt6	97	56.341	Gambusia_affinis
MGP_PahariEiJ_G0025789	Trmt6	95	57.773	ENSGACG00000012471	trmt6	96	57.773	Gasterosteus_aculeatus
MGP_PahariEiJ_G0025789	Trmt6	95	73.125	ENSGAGG00000008464	TRMT6	98	74.286	Gopherus_agassizii
MGP_PahariEiJ_G0025789	Trmt6	100	86.345	ENSGGOG00000008597	TRMT6	100	86.345	Gorilla_gorilla
MGP_PahariEiJ_G0025789	Trmt6	95	57.143	ENSHBUG00000016631	trmt6	96	57.143	Haplochromis_burtoni
MGP_PahariEiJ_G0025789	Trmt6	99	85.253	ENSHGLG00000015405	TRMT6	99	85.253	Heterocephalus_glaber_female
MGP_PahariEiJ_G0025789	Trmt6	99	85.253	ENSHGLG00100004120	TRMT6	99	85.253	Heterocephalus_glaber_male
MGP_PahariEiJ_G0025789	Trmt6	96	58.212	ENSHCOG00000000118	trmt6	97	58.212	Hippocampus_comes
MGP_PahariEiJ_G0025789	Trmt6	95	58.958	ENSIPUG00000019365	trmt6	97	59.789	Ictalurus_punctatus
MGP_PahariEiJ_G0025789	Trmt6	100	86.922	ENSSTOG00000006863	TRMT6	100	86.922	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0025789	Trmt6	99	84.818	ENSJJAG00000007315	Trmt6	99	84.818	Jaculus_jaculus
MGP_PahariEiJ_G0025789	Trmt6	95	57.531	ENSKMAG00000001295	trmt6	97	58.774	Kryptolebias_marmoratus
MGP_PahariEiJ_G0025789	Trmt6	96	57.233	ENSLBEG00000025654	trmt6	97	57.203	Labrus_bergylta
MGP_PahariEiJ_G0025789	Trmt6	96	67.573	ENSLACG00000016478	TRMT6	96	67.573	Latimeria_chalumnae
MGP_PahariEiJ_G0025789	Trmt6	96	63.883	ENSLOCG00000016451	trmt6	97	63.883	Lepisosteus_oculatus
MGP_PahariEiJ_G0025789	Trmt6	99	84.909	ENSLAFG00000032216	TRMT6	99	84.909	Loxodonta_africana
MGP_PahariEiJ_G0025789	Trmt6	100	85.944	ENSMFAG00000044360	TRMT6	100	85.944	Macaca_fascicularis
MGP_PahariEiJ_G0025789	Trmt6	100	85.944	ENSMMUG00000013728	TRMT6	100	85.944	Macaca_mulatta
MGP_PahariEiJ_G0025789	Trmt6	100	85.743	ENSMNEG00000041831	TRMT6	100	85.743	Macaca_nemestrina
MGP_PahariEiJ_G0025789	Trmt6	100	85.944	ENSMLEG00000040762	TRMT6	100	85.944	Mandrillus_leucophaeus
MGP_PahariEiJ_G0025789	Trmt6	96	57.287	ENSMAMG00000012101	trmt6	98	59.667	Mastacembelus_armatus
MGP_PahariEiJ_G0025789	Trmt6	95	57.143	ENSMZEG00005010771	trmt6	95	57.143	Maylandia_zebra
MGP_PahariEiJ_G0025789	Trmt6	95	71.789	ENSMGAG00000007678	TRMT6	96	71.789	Meleagris_gallopavo
MGP_PahariEiJ_G0025789	Trmt6	100	92.555	ENSMAUG00000008719	Trmt6	100	92.555	Mesocricetus_auratus
MGP_PahariEiJ_G0025789	Trmt6	96	86.875	ENSMICG00000011626	TRMT6	99	86.032	Microcebus_murinus
MGP_PahariEiJ_G0025789	Trmt6	100	92.757	ENSMOCG00000022320	Trmt6	100	92.757	Microtus_ochrogaster
MGP_PahariEiJ_G0025789	Trmt6	96	54.717	ENSMMOG00000004412	trmt6	97	54.717	Mola_mola
MGP_PahariEiJ_G0025789	Trmt6	99	74.593	ENSMODG00000003784	TRMT6	98	74.593	Monodelphis_domestica
MGP_PahariEiJ_G0025789	Trmt6	96	54.280	ENSMALG00000018140	trmt6	96	54.280	Monopterus_albus
MGP_PahariEiJ_G0025789	Trmt6	100	96.177	MGP_CAROLIEiJ_G0024344	Trmt6	100	96.177	Mus_caroli
MGP_PahariEiJ_G0025789	Trmt6	100	96.781	ENSMUSG00000037376	Trmt6	100	96.781	Mus_musculus
MGP_PahariEiJ_G0025789	Trmt6	100	96.177	MGP_SPRETEiJ_G0025264	Trmt6	100	96.177	Mus_spretus
MGP_PahariEiJ_G0025789	Trmt6	87	86.897	ENSMPUG00000006317	TRMT6	93	86.897	Mustela_putorius_furo
MGP_PahariEiJ_G0025789	Trmt6	97	86.279	ENSMLUG00000006491	TRMT6	100	85.341	Myotis_lucifugus
MGP_PahariEiJ_G0025789	Trmt6	100	86.172	ENSNGAG00000015251	Trmt6	100	86.172	Nannospalax_galili
MGP_PahariEiJ_G0025789	Trmt6	95	54.430	ENSNBRG00000020261	trmt6	96	54.430	Neolamprologus_brichardi
MGP_PahariEiJ_G0025789	Trmt6	100	85.944	ENSNLEG00000013957	TRMT6	100	85.944	Nomascus_leucogenys
MGP_PahariEiJ_G0025789	Trmt6	84	77.088	ENSMEUG00000009179	TRMT6	99	77.088	Notamacropus_eugenii
MGP_PahariEiJ_G0025789	Trmt6	96	83.784	ENSOPRG00000008564	TRMT6	98	83.784	Ochotona_princeps
MGP_PahariEiJ_G0025789	Trmt6	100	85.341	ENSODEG00000005657	TRMT6	100	85.341	Octodon_degus
MGP_PahariEiJ_G0025789	Trmt6	95	57.983	ENSONIG00000000968	trmt6	96	57.983	Oreochromis_niloticus
MGP_PahariEiJ_G0025789	Trmt6	91	77.363	ENSOANG00000008403	-	99	77.363	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0025789	Trmt6	99	85.830	ENSOCUG00000014669	TRMT6	99	85.830	Oryctolagus_cuniculus
MGP_PahariEiJ_G0025789	Trmt6	95	55.741	ENSORLG00000009862	trmt6	97	55.741	Oryzias_latipes
MGP_PahariEiJ_G0025789	Trmt6	95	55.532	ENSORLG00020001466	trmt6	97	55.532	Oryzias_latipes_hni
MGP_PahariEiJ_G0025789	Trmt6	95	55.833	ENSORLG00015015552	trmt6	97	55.950	Oryzias_latipes_hsok
MGP_PahariEiJ_G0025789	Trmt6	96	54.792	ENSOMEG00000019874	trmt6	97	54.792	Oryzias_melastigma
MGP_PahariEiJ_G0025789	Trmt6	97	85.270	ENSOGAG00000012950	TRMT6	98	84.584	Otolemur_garnettii
MGP_PahariEiJ_G0025789	Trmt6	99	86.061	ENSOARG00000017993	TRMT6	99	86.061	Ovis_aries
MGP_PahariEiJ_G0025789	Trmt6	100	85.571	ENSPPAG00000036809	TRMT6	100	85.571	Pan_paniscus
MGP_PahariEiJ_G0025789	Trmt6	99	87.221	ENSPPRG00000000424	TRMT6	99	87.221	Panthera_pardus
MGP_PahariEiJ_G0025789	Trmt6	99	87.221	ENSPTIG00000010629	TRMT6	99	87.221	Panthera_tigris_altaica
MGP_PahariEiJ_G0025789	Trmt6	100	86.145	ENSPTRG00000013231	TRMT6	100	86.145	Pan_troglodytes
MGP_PahariEiJ_G0025789	Trmt6	100	85.944	ENSPANG00000009284	TRMT6	100	85.944	Papio_anubis
MGP_PahariEiJ_G0025789	Trmt6	96	60.879	ENSPKIG00000003441	trmt6	97	60.879	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0025789	Trmt6	95	72.973	ENSPSIG00000017048	TRMT6	97	72.973	Pelodiscus_sinensis
MGP_PahariEiJ_G0025789	Trmt6	86	58.879	ENSPMGG00000021074	trmt6	96	58.515	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0025789	Trmt6	97	92.723	ENSPEMG00000023268	Trmt6	100	91.784	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0025789	Trmt6	100	74.704	ENSPCIG00000001546	TRMT6	99	74.704	Phascolarctos_cinereus
MGP_PahariEiJ_G0025789	Trmt6	96	56.790	ENSPFOG00000003037	trmt6	97	56.790	Poecilia_formosa
MGP_PahariEiJ_G0025789	Trmt6	96	57.054	ENSPLAG00000005143	trmt6	97	57.054	Poecilia_latipinna
MGP_PahariEiJ_G0025789	Trmt6	96	57.469	ENSPMEG00000014875	trmt6	97	57.469	Poecilia_mexicana
MGP_PahariEiJ_G0025789	Trmt6	96	53.571	ENSPREG00000016227	trmt6	96	53.992	Poecilia_reticulata
MGP_PahariEiJ_G0025789	Trmt6	100	86.345	ENSPPYG00000010691	TRMT6	100	86.345	Pongo_abelii
MGP_PahariEiJ_G0025789	Trmt6	99	83.707	ENSPCAG00000012098	TRMT6	99	83.707	Procavia_capensis
MGP_PahariEiJ_G0025789	Trmt6	97	86.307	ENSPCOG00000020723	TRMT6	99	85.657	Propithecus_coquereli
MGP_PahariEiJ_G0025789	Trmt6	99	81.653	ENSPVAG00000007539	TRMT6	99	81.653	Pteropus_vampyrus
MGP_PahariEiJ_G0025789	Trmt6	95	56.660	ENSPNYG00000000918	trmt6	97	56.660	Pundamilia_nyererei
MGP_PahariEiJ_G0025789	Trmt6	96	59.259	ENSPNAG00000019279	trmt6	96	59.259	Pygocentrus_nattereri
MGP_PahariEiJ_G0025789	Trmt6	100	93.763	ENSRNOG00000021270	Trmt6	100	93.763	Rattus_norvegicus
MGP_PahariEiJ_G0025789	Trmt6	100	85.141	ENSRBIG00000031132	TRMT6	100	85.141	Rhinopithecus_bieti
MGP_PahariEiJ_G0025789	Trmt6	100	85.944	ENSRROG00000045329	TRMT6	100	85.944	Rhinopithecus_roxellana
MGP_PahariEiJ_G0025789	Trmt6	100	85.743	ENSSBOG00000033602	-	100	85.743	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0025789	Trmt6	85	85.523	ENSSBOG00000019803	-	99	85.523	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0025789	Trmt6	99	75.304	ENSSHAG00000010754	TRMT6	96	75.304	Sarcophilus_harrisii
MGP_PahariEiJ_G0025789	Trmt6	96	62.680	ENSSFOG00015008429	trmt6	97	62.680	Scleropages_formosus
MGP_PahariEiJ_G0025789	Trmt6	96	57.557	ENSSMAG00000005352	trmt6	97	57.971	Scophthalmus_maximus
MGP_PahariEiJ_G0025789	Trmt6	96	59.167	ENSSDUG00000008294	trmt6	97	59.583	Seriola_dumerili
MGP_PahariEiJ_G0025789	Trmt6	96	59.583	ENSSLDG00000002180	trmt6	97	60.208	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0025789	Trmt6	97	80.457	ENSSARG00000005487	TRMT6	100	79.116	Sorex_araneus
MGP_PahariEiJ_G0025789	Trmt6	96	58.910	ENSSPAG00000011628	trmt6	97	59.119	Stegastes_partitus
MGP_PahariEiJ_G0025789	Trmt6	99	84.879	ENSSSCG00000007046	TRMT6	71	84.879	Sus_scrofa
MGP_PahariEiJ_G0025789	Trmt6	95	72.211	ENSTGUG00000002195	TRMT6	97	73.684	Taeniopygia_guttata
MGP_PahariEiJ_G0025789	Trmt6	95	55.789	ENSTRUG00000007153	trmt6	97	56.211	Takifugu_rubripes
MGP_PahariEiJ_G0025789	Trmt6	95	57.438	ENSTNIG00000010726	TRMT6	96	57.438	Tetraodon_nigroviridis
MGP_PahariEiJ_G0025789	Trmt6	76	87.742	ENSTBEG00000016317	TRMT6	76	87.742	Tupaia_belangeri
MGP_PahariEiJ_G0025789	Trmt6	100	85.743	ENSTTRG00000012889	TRMT6	100	85.743	Tursiops_truncatus
MGP_PahariEiJ_G0025789	Trmt6	100	86.145	ENSUAMG00000008674	TRMT6	100	86.145	Ursus_americanus
MGP_PahariEiJ_G0025789	Trmt6	100	86.145	ENSUMAG00000004999	TRMT6	100	86.145	Ursus_maritimus
MGP_PahariEiJ_G0025789	Trmt6	100	85.089	ENSVPAG00000002371	TRMT6	100	85.089	Vicugna_pacos
MGP_PahariEiJ_G0025789	Trmt6	100	85.944	ENSVVUG00000023370	TRMT6	100	85.944	Vulpes_vulpes
MGP_PahariEiJ_G0025789	Trmt6	96	65.975	ENSXETG00000004501	trmt6	98	65.975	Xenopus_tropicalis
MGP_PahariEiJ_G0025789	Trmt6	96	52.101	ENSXCOG00000007761	trmt6	97	52.731	Xiphophorus_couchianus
MGP_PahariEiJ_G0025789	Trmt6	96	57.083	ENSXMAG00000008592	trmt6	97	57.083	Xiphophorus_maculatus