EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
MGP_PahariEiJ_G0025838 (Gene tree)
Gene ID
110317607
Gene Symbol
Crnkl1
Alias
1200013P10Rik|5730590A01Rik|crn
Full Name
crooked neck pre-mRNA splicing factor 1
Gene Type
protein_coding
Species
Mus_pahari
Status
putative
Strand
Minus strand
Length
17598 bases
Position
chr3:128414134-128431731
Accession
110317607
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_PahariEiJ_P0066009HATPF02184.161.2e-3912
MGP_PahariEiJ_P0066009HATPF02184.161.2e-3922
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_PahariEiJ_T0066009-3474-MGP_PahariEiJ_P0066009690 (aa)XP_021047806UPI000A314345
MGP_PahariEiJ_T0066010-431--- (aa)--
MGP_PahariEiJ_T0066011-673--- (aa)--
Gene Model
Click here to download MGP_PahariEiJ_G0025838's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0025838's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_PahariEiJ_G0025838Crnkl19994.614ENSG00000101343CRNKL110094.614Homo_sapiens
MGP_PahariEiJ_G0025838Crnkl19984.985ENSAPOG00000009705crnkl19784.889Acanthochromis_polyacanthus
MGP_PahariEiJ_G0025838Crnkl19996.652ENSAMEG00000000270CRNKL18396.652Ailuropoda_melanoleuca
MGP_PahariEiJ_G0025838Crnkl19885.312ENSACIG00000015267crnkl18985.312Amphilophus_citrinellus
MGP_PahariEiJ_G0025838Crnkl19985.131ENSAOCG00000021964crnkl19185.131Amphiprion_ocellaris
MGP_PahariEiJ_G0025838Crnkl19984.862ENSAPEG00000015041crnkl19184.862Amphiprion_percula
MGP_PahariEiJ_G0025838Crnkl19984.157ENSATEG00000001068crnkl18985.000Anabas_testudineus
MGP_PahariEiJ_G0025838Crnkl19988.937ENSAPLG00000013105CRNKL19988.937Anas_platyrhynchos
MGP_PahariEiJ_G0025838Crnkl19991.362ENSACAG00000005284CRNKL19991.362Anolis_carolinensis
MGP_PahariEiJ_G0025838Crnkl19295.411ENSANAG00000024889CRNKL110095.411Aotus_nancymaae
MGP_PahariEiJ_G0025838Crnkl19985.444ENSACLG00000010813crnkl19185.444Astatotilapia_calliptera
MGP_PahariEiJ_G0025838Crnkl19686.747ENSAMXG00000018334crnkl19384.716Astyanax_mexicanus
MGP_PahariEiJ_G0025838Crnkl19994.913ENSBTAG00000008472CRNKL19994.913Bos_taurus
MGP_PahariEiJ_G0025838Crnkl19361.646WBGene00019762M03F8.39360.489Caenorhabditis_elegans
MGP_PahariEiJ_G0025838Crnkl19994.760ENSCJAG00000005393CRNKL110094.760Callithrix_jacchus
MGP_PahariEiJ_G0025838Crnkl19996.361ENSCAFG00000005333CRNKL19496.361Canis_familiaris
MGP_PahariEiJ_G0025838Crnkl19996.361ENSCAFG00020027488CRNKL110096.361Canis_lupus_dingo
MGP_PahariEiJ_G0025838Crnkl19994.186ENSCHIG00000013171CRNKL19994.186Capra_hircus
MGP_PahariEiJ_G0025838Crnkl19995.488ENSTSYG00000004197CRNKL110095.488Carlito_syrichta
MGP_PahariEiJ_G0025838Crnkl19594.839ENSCAPG00000010501CRNKL19994.839Cavia_aperea
MGP_PahariEiJ_G0025838Crnkl19995.197ENSCPOG00000004418CRNKL110095.197Cavia_porcellus
MGP_PahariEiJ_G0025838Crnkl19994.760ENSCCAG00000027037CRNKL110094.760Cebus_capucinus
MGP_PahariEiJ_G0025838Crnkl19994.614ENSCATG00000034247CRNKL110094.614Cercocebus_atys
MGP_PahariEiJ_G0025838Crnkl19996.070ENSCLAG00000013859CRNKL110096.070Chinchilla_lanigera
MGP_PahariEiJ_G0025838Crnkl19994.614ENSCSAG00000011434CRNKL110094.614Chlorocebus_sabaeus
MGP_PahariEiJ_G0025838Crnkl19995.735ENSCHOG00000006371CRNKL18495.779Choloepus_hoffmanni
MGP_PahariEiJ_G0025838Crnkl19992.409ENSCPBG00000023501CRNKL19992.409Chrysemys_picta_bellii
MGP_PahariEiJ_G0025838Crnkl19668.882ENSCING00000002709-9967.251Ciona_intestinalis
MGP_PahariEiJ_G0025838Crnkl19994.760ENSCANG00000038789CRNKL110094.760Colobus_angolensis_palliatus
MGP_PahariEiJ_G0025838Crnkl110097.101ENSCGRG00001000687-10097.101Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0025838Crnkl110097.101ENSCGRG00001001115-10097.101Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0025838Crnkl110097.101ENSCGRG00000007854Crnkl110097.101Cricetulus_griseus_crigri
MGP_PahariEiJ_G0025838Crnkl19884.593ENSCSEG00000005594crnkl18783.552Cynoglossus_semilaevis
MGP_PahariEiJ_G0025838Crnkl19786.637ENSCVAG00000015172crnkl19284.716Cyprinodon_variegatus
MGP_PahariEiJ_G0025838Crnkl19685.347ENSDARG00000007901crnkl19084.064Danio_rerio
MGP_PahariEiJ_G0025838Crnkl19996.199ENSDNOG00000016226CRNKL19596.199Dasypus_novemcinctus
MGP_PahariEiJ_G0025838Crnkl19786.716ENSDORG00000030174-9986.716Dipodomys_ordii
MGP_PahariEiJ_G0025838Crnkl19995.094ENSDORG00000000394-10095.094Dipodomys_ordii
MGP_PahariEiJ_G0025838Crnkl19787.313ENSDORG00000023724-9987.313Dipodomys_ordii
MGP_PahariEiJ_G0025838Crnkl19669.219FBgn0000377crn9569.219Drosophila_melanogaster
MGP_PahariEiJ_G0025838Crnkl19983.115ENSETEG00000003711CRNKL18483.115Echinops_telfairi
MGP_PahariEiJ_G0025838Crnkl19958.396ENSEBUG00000013461crnkl19658.272Eptatretus_burgeri
MGP_PahariEiJ_G0025838Crnkl19996.361ENSEASG00005002072CRNKL110096.361Equus_asinus_asinus
MGP_PahariEiJ_G0025838Crnkl19996.361ENSECAG00000022215CRNKL110096.361Equus_caballus
MGP_PahariEiJ_G0025838Crnkl19993.088ENSEEUG00000000413CRNKL19293.159Erinaceus_europaeus
MGP_PahariEiJ_G0025838Crnkl19784.281ENSELUG00000015424crnkl19782.895Esox_lucius
MGP_PahariEiJ_G0025838Crnkl19996.652ENSFCAG00000000714CRNKL110096.652Felis_catus
MGP_PahariEiJ_G0025838Crnkl19790.476ENSFALG00000004611CRNKL110090.476Ficedula_albicollis
MGP_PahariEiJ_G0025838Crnkl19995.779ENSFDAG00000000604CRNKL110095.779Fukomys_damarensis
MGP_PahariEiJ_G0025838Crnkl19885.438ENSFHEG00000013163crnkl19084.203Fundulus_heteroclitus
MGP_PahariEiJ_G0025838Crnkl19784.880ENSGMOG00000007609crnkl19483.115Gadus_morhua
MGP_PahariEiJ_G0025838Crnkl19991.825ENSGALG00000008429CRNKL19991.825Gallus_gallus
MGP_PahariEiJ_G0025838Crnkl19785.886ENSGAFG00000014249crnkl19084.234Gambusia_affinis
MGP_PahariEiJ_G0025838Crnkl19983.480ENSGACG00000011852crnkl19183.480Gasterosteus_aculeatus
MGP_PahariEiJ_G0025838Crnkl19591.159ENSGAGG00000021233CRNKL110091.159Gopherus_agassizii
MGP_PahariEiJ_G0025838Crnkl19994.614ENSGGOG00000014176CRNKL110094.614Gorilla_gorilla
MGP_PahariEiJ_G0025838Crnkl19985.298ENSHBUG00000005246crnkl19185.298Haplochromis_burtoni
MGP_PahariEiJ_G0025838Crnkl19995.633ENSHGLG00000010856CRNKL110095.633Heterocephalus_glaber_female
MGP_PahariEiJ_G0025838Crnkl19995.633ENSHGLG00100011521CRNKL110095.633Heterocephalus_glaber_male
MGP_PahariEiJ_G0025838Crnkl19783.508ENSHCOG00000006420crnkl19981.659Hippocampus_comes
MGP_PahariEiJ_G0025838Crnkl19486.903ENSIPUG00000006751crnkl19385.075Ictalurus_punctatus
MGP_PahariEiJ_G0025838Crnkl19674.586ENSIPUG00000006836-9973.817Ictalurus_punctatus
MGP_PahariEiJ_G0025838Crnkl19267.975ENSIPUG00000000315-10069.182Ictalurus_punctatus
MGP_PahariEiJ_G0025838Crnkl19996.798ENSSTOG00000014747CRNKL110096.798Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0025838Crnkl19994.737ENSJJAG00000016926Crnkl110094.737Jaculus_jaculus
MGP_PahariEiJ_G0025838Crnkl19984.548ENSKMAG00000003620crnkl18784.548Kryptolebias_marmoratus
MGP_PahariEiJ_G0025838Crnkl19769.391ENSLBEG00000003543crnkl19271.637Labrus_bergylta
MGP_PahariEiJ_G0025838Crnkl19986.823ENSLACG00000001129CRNKL19986.823Latimeria_chalumnae
MGP_PahariEiJ_G0025838Crnkl19687.500ENSLOCG00000016889crnkl19586.111Lepisosteus_oculatus
MGP_PahariEiJ_G0025838Crnkl19995.203ENSLAFG00000004512CRNKL110095.930Loxodonta_africana
MGP_PahariEiJ_G0025838Crnkl19994.614ENSMFAG00000039893CRNKL110094.614Macaca_fascicularis
MGP_PahariEiJ_G0025838Crnkl19994.614ENSMMUG00000007709CRNKL110094.614Macaca_mulatta
MGP_PahariEiJ_G0025838Crnkl19994.614ENSMNEG00000037490CRNKL110094.614Macaca_nemestrina
MGP_PahariEiJ_G0025838Crnkl19994.614ENSMLEG00000034885CRNKL110094.614Mandrillus_leucophaeus
MGP_PahariEiJ_G0025838Crnkl19984.571ENSMAMG00000008757crnkl19184.571Mastacembelus_armatus
MGP_PahariEiJ_G0025838Crnkl19985.444ENSMZEG00005022345crnkl19185.444Maylandia_zebra
MGP_PahariEiJ_G0025838Crnkl19991.108ENSMGAG00000003452CRNKL19491.108Meleagris_gallopavo
MGP_PahariEiJ_G0025838Crnkl110096.957ENSMAUG00000020764Crnkl110096.957Mesocricetus_auratus
MGP_PahariEiJ_G0025838Crnkl19995.924ENSMICG00000006048CRNKL110095.924Microcebus_murinus
MGP_PahariEiJ_G0025838Crnkl110089.031ENSMOCG00000000681-10089.031Microtus_ochrogaster
MGP_PahariEiJ_G0025838Crnkl19669.219ENSMOCG00000004179-9868.162Microtus_ochrogaster
MGP_PahariEiJ_G0025838Crnkl19184.311ENSMMOG00000017601crnkl19784.311Mola_mola
MGP_PahariEiJ_G0025838Crnkl19990.086ENSMODG00000005961-9990.086Monodelphis_domestica
MGP_PahariEiJ_G0025838Crnkl110084.783ENSMODG00000010857-10084.783Monodelphis_domestica
MGP_PahariEiJ_G0025838Crnkl19961.326ENSMALG00000011211crnkl19061.939Monopterus_albus
MGP_PahariEiJ_G0025838Crnkl110097.826MGP_CAROLIEiJ_G0024394Crnkl110097.826Mus_caroli
MGP_PahariEiJ_G0025838Crnkl110097.971ENSMUSG00000001767Crnkl110097.971Mus_musculus
MGP_PahariEiJ_G0025838Crnkl110097.826MGP_SPRETEiJ_G0025312Crnkl110097.826Mus_spretus
MGP_PahariEiJ_G0025838Crnkl19996.507ENSMPUG00000001226CRNKL110096.507Mustela_putorius_furo
MGP_PahariEiJ_G0025838Crnkl19995.742ENSMLUG00000016513CRNKL18995.785Myotis_lucifugus
MGP_PahariEiJ_G0025838Crnkl19994.286ENSNGAG00000023097Crnkl110094.286Nannospalax_galili
MGP_PahariEiJ_G0025838Crnkl19985.590ENSNBRG00000007867crnkl19185.590Neolamprologus_brichardi
MGP_PahariEiJ_G0025838Crnkl19991.121ENSNLEG00000009862CRNKL110091.121Nomascus_leucogenys
MGP_PahariEiJ_G0025838Crnkl19793.284ENSMEUG00000012167-10093.284Notamacropus_eugenii
MGP_PahariEiJ_G0025838Crnkl19984.738ENSMEUG00000002361-9984.738Notamacropus_eugenii
MGP_PahariEiJ_G0025838Crnkl18667.761ENSOPRG00000009242-6167.761Ochotona_princeps
MGP_PahariEiJ_G0025838Crnkl19995.633ENSODEG00000012175CRNKL110095.633Octodon_degus
MGP_PahariEiJ_G0025838Crnkl19985.590ENSONIG00000018728crnkl19185.590Oreochromis_niloticus
MGP_PahariEiJ_G0025838Crnkl19996.647ENSOCUG00000015484CRNKL18396.647Oryctolagus_cuniculus
MGP_PahariEiJ_G0025838Crnkl19784.384ENSORLG00000017240crnkl19678.530Oryzias_latipes
MGP_PahariEiJ_G0025838Crnkl19784.535ENSORLG00020001742crnkl18984.535Oryzias_latipes_hni
MGP_PahariEiJ_G0025838Crnkl19784.535ENSORLG00015019564crnkl18984.535Oryzias_latipes_hsok
MGP_PahariEiJ_G0025838Crnkl19983.504ENSOMEG00000019895crnkl19183.504Oryzias_melastigma
MGP_PahariEiJ_G0025838Crnkl19994.905ENSOGAG00000011544CRNKL110094.905Otolemur_garnettii
MGP_PahariEiJ_G0025838Crnkl19995.154ENSOARG00000002150CRNKL19095.203Ovis_aries
MGP_PahariEiJ_G0025838Crnkl19993.382ENSPPAG00000027847CRNKL18393.450Pan_paniscus
MGP_PahariEiJ_G0025838Crnkl19996.652ENSPPRG00000001955CRNKL110096.652Panthera_pardus
MGP_PahariEiJ_G0025838Crnkl19996.652ENSPTIG00000007393CRNKL110096.652Panthera_tigris_altaica
MGP_PahariEiJ_G0025838Crnkl19994.469ENSPTRG00000030609CRNKL110094.469Pan_troglodytes
MGP_PahariEiJ_G0025838Crnkl19994.614ENSPANG00000017420CRNKL110094.614Papio_anubis
MGP_PahariEiJ_G0025838Crnkl19682.406ENSPKIG00000017093crnkl18981.672Paramormyrops_kingsleyae
MGP_PahariEiJ_G0025838Crnkl19991.069ENSPSIG00000012705CRNKL19991.069Pelodiscus_sinensis
MGP_PahariEiJ_G0025838Crnkl19879.179ENSPMGG00000006263crnkl19678.792Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0025838Crnkl110097.101ENSPEMG00000000073-9997.101Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0025838Crnkl19981.304ENSPMAG00000002250crnkl19981.304Petromyzon_marinus
MGP_PahariEiJ_G0025838Crnkl19992.431ENSPCIG00000025825CRNKL19692.431Phascolarctos_cinereus
MGP_PahariEiJ_G0025838Crnkl19785.736ENSPFOG00000005102crnkl19383.768Poecilia_formosa
MGP_PahariEiJ_G0025838Crnkl19785.736ENSPLAG00000007288crnkl19083.647Poecilia_latipinna
MGP_PahariEiJ_G0025838Crnkl19785.886ENSPMEG00000008865crnkl19483.913Poecilia_mexicana
MGP_PahariEiJ_G0025838Crnkl19785.435ENSPREG00000012615crnkl19283.406Poecilia_reticulata
MGP_PahariEiJ_G0025838Crnkl19994.559ENSPPYG00000010747CRNKL18194.614Pongo_abelii
MGP_PahariEiJ_G0025838Crnkl19990.000ENSPCAG00000003296CRNKL18590.102Procavia_capensis
MGP_PahariEiJ_G0025838Crnkl19994.559ENSPCOG00000017608CRNKL18394.614Propithecus_coquereli
MGP_PahariEiJ_G0025838Crnkl19995.882ENSPVAG00000006207CRNKL18395.924Pteropus_vampyrus
MGP_PahariEiJ_G0025838Crnkl19985.298ENSPNYG00000001977crnkl19185.298Pundamilia_nyererei
MGP_PahariEiJ_G0025838Crnkl19787.612ENSPNAG00000001507crnkl19882.849Pygocentrus_nattereri
MGP_PahariEiJ_G0025838Crnkl110097.971ENSRNOG00000010587Crnkl110097.971Rattus_norvegicus
MGP_PahariEiJ_G0025838Crnkl110097.536ENSRNOG00000040045Crnkl110097.536Rattus_norvegicus
MGP_PahariEiJ_G0025838Crnkl19994.469ENSRBIG00000031770CRNKL110094.469Rhinopithecus_bieti
MGP_PahariEiJ_G0025838Crnkl19994.323ENSRROG00000040450CRNKL110094.323Rhinopithecus_roxellana
MGP_PahariEiJ_G0025838Crnkl19437.155YLR117CCLF19937.246Saccharomyces_cerevisiae
MGP_PahariEiJ_G0025838Crnkl19994.760ENSSBOG00000029672CRNKL110094.760Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0025838Crnkl19573.293ENSSHAG00000011199CRNKL19973.293Sarcophilus_harrisii
MGP_PahariEiJ_G0025838Crnkl19686.254ENSSFOG00015000946crnkl18984.649Scleropages_formosus
MGP_PahariEiJ_G0025838Crnkl19785.052ENSSMAG00000007933crnkl18785.052Scophthalmus_maximus
MGP_PahariEiJ_G0025838Crnkl19978.166ENSSDUG00000012625crnkl18778.940Seriola_dumerili
MGP_PahariEiJ_G0025838Crnkl19984.694ENSSLDG00000021413crnkl18984.694Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0025838Crnkl19995.779ENSSARG00000006443CRNKL18295.779Sorex_araneus
MGP_PahariEiJ_G0025838Crnkl19991.362ENSSPUG00000005254CRNKL19991.362Sphenodon_punctatus
MGP_PahariEiJ_G0025838Crnkl19984.615ENSSPAG00000016150crnkl18984.615Stegastes_partitus
MGP_PahariEiJ_G0025838Crnkl19996.221ENSSSCG00000038587CRNKL19996.221Sus_scrofa
MGP_PahariEiJ_G0025838Crnkl19990.671ENSTGUG00000007645CRNKL19890.671Taeniopygia_guttata
MGP_PahariEiJ_G0025838Crnkl19779.940ENSTRUG00000015417crnkl19079.087Takifugu_rubripes
MGP_PahariEiJ_G0025838Crnkl19784.558ENSTNIG00000010710crnkl19983.236Tetraodon_nigroviridis
MGP_PahariEiJ_G0025838Crnkl19194.400ENSTBEG00000001304CRNKL18294.462Tupaia_belangeri
MGP_PahariEiJ_G0025838Crnkl19191.840ENSTTRG00000000484CRNKL18191.930Tursiops_truncatus
MGP_PahariEiJ_G0025838Crnkl19996.652ENSUAMG00000018586CRNKL110096.652Ursus_americanus
MGP_PahariEiJ_G0025838Crnkl19996.652ENSUMAG00000024957CRNKL110096.652Ursus_maritimus
MGP_PahariEiJ_G0025838Crnkl19996.361ENSVVUG00000012559CRNKL18296.361Vulpes_vulpes
MGP_PahariEiJ_G0025838Crnkl19989.083ENSXETG00000009698crnkl19989.083Xenopus_tropicalis
MGP_PahariEiJ_G0025838Crnkl19785.007ENSXCOG00000000824crnkl19183.309Xiphophorus_couchianus
MGP_PahariEiJ_G0025838Crnkl19785.886ENSXMAG00000006896crnkl19184.164Xiphophorus_maculatus

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