EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0025852 (Gene tree)
Gene ID: 110318093
Gene Symbol: Gzf1
Alias: 8430437G08Rik|Zfp336
Full Name: GDNF inducible zinc finger protein 1
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 12856 bases
Position: chr3:131079558-131092413
Accession: 110318093
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0066061	zf-C2H2	PF00096.26	1.1e-34	1	6
MGP_PahariEiJ_P0066061	zf-C2H2	PF00096.26	1.1e-34	2	6
MGP_PahariEiJ_P0066061	zf-C2H2	PF00096.26	1.1e-34	3	6
MGP_PahariEiJ_P0066061	zf-C2H2	PF00096.26	1.1e-34	4	6
MGP_PahariEiJ_P0066061	zf-C2H2	PF00096.26	1.1e-34	5	6
MGP_PahariEiJ_P0066061	zf-C2H2	PF00096.26	1.1e-34	6	6
MGP_PahariEiJ_P0066061	zf-met	PF12874.7	3.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0066063	-	734	-	-	- (aa)	-	-
MGP_PahariEiJ_T0066062	-	710	-	MGP_PahariEiJ_P0066062	146 (aa)	-	-
MGP_PahariEiJ_T0066061	-	4236	XM_021192839	MGP_PahariEiJ_P0066061	706 (aa)	XP_021048498	UPI000A313AAC

Gene Model

Click here to download MGP_PahariEiJ_G0025852's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0025852's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0025852	Gzf1	51	44.792	MGP_PahariEiJ_G0021003	Zfp628	57	44.330
MGP_PahariEiJ_G0025852	Gzf1	56	42.857	MGP_PahariEiJ_G0020835	Zbtb14	55	42.857
MGP_PahariEiJ_G0025852	Gzf1	83	37.118	MGP_PahariEiJ_G0029075	Zbtb17	78	39.209
MGP_PahariEiJ_G0025852	Gzf1	66	44.103	MGP_PahariEiJ_G0016960	Zbtb49	67	46.479
MGP_PahariEiJ_G0025852	Gzf1	69	36.404	MGP_PahariEiJ_G0015038	Zbtb16	61	38.235
MGP_PahariEiJ_G0025852	Gzf1	64	37.725	MGP_PahariEiJ_G0015696	Zfp651	53	37.725
MGP_PahariEiJ_G0025852	Gzf1	58	42.529	MGP_PahariEiJ_G0021011	-	79	38.500
MGP_PahariEiJ_G0025852	Gzf1	59	44.853	MGP_PahariEiJ_G0017753	Bcl6b	65	44.853
MGP_PahariEiJ_G0025852	Gzf1	55	56.000	MGP_PahariEiJ_G0019173	Zfp236	64	39.855
MGP_PahariEiJ_G0025852	Gzf1	82	32.903	MGP_PahariEiJ_G0027903	Zbtb41	64	33.714

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0025852	Gzf1	100	82.048	ENSG00000125812	GZF1	100	91.667	Homo_sapiens
MGP_PahariEiJ_G0025852	Gzf1	85	49.340	ENSAPOG00000012930	GZF1	94	49.097	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0025852	Gzf1	100	75.174	ENSAMEG00000009853	GZF1	100	75.174	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0025852	Gzf1	89	45.706	ENSACIG00000004753	-	76	46.512	Amphilophus_citrinellus
MGP_PahariEiJ_G0025852	Gzf1	85	49.153	ENSAOCG00000024275	GZF1	93	49.153	Amphiprion_ocellaris
MGP_PahariEiJ_G0025852	Gzf1	86	46.958	ENSAPEG00000017195	GZF1	73	47.253	Amphiprion_percula
MGP_PahariEiJ_G0025852	Gzf1	87	42.212	ENSATEG00000018374	GZF1	88	77.596	Anabas_testudineus
MGP_PahariEiJ_G0025852	Gzf1	100	80.169	ENSANAG00000028240	GZF1	100	79.606	Aotus_nancymaae
MGP_PahariEiJ_G0025852	Gzf1	87	47.087	ENSAMXG00000017178	GZF1	84	46.772	Astyanax_mexicanus
MGP_PahariEiJ_G0025852	Gzf1	100	79.887	ENSCJAG00000000733	GZF1	100	79.184	Callithrix_jacchus
MGP_PahariEiJ_G0025852	Gzf1	100	78.732	ENSCAFG00000005142	GZF1	100	78.732	Canis_familiaris
MGP_PahariEiJ_G0025852	Gzf1	55	82.727	ENSCAFG00020027463	-	100	82.727	Canis_lupus_dingo
MGP_PahariEiJ_G0025852	Gzf1	100	76.117	ENSTSYG00000028054	GZF1	100	74.931	Carlito_syrichta
MGP_PahariEiJ_G0025852	Gzf1	100	74.616	ENSCAPG00000002173	GZF1	100	74.477	Cavia_aperea
MGP_PahariEiJ_G0025852	Gzf1	100	74.477	ENSCPOG00000010790	GZF1	100	74.338	Cavia_porcellus
MGP_PahariEiJ_G0025852	Gzf1	100	79.887	ENSCCAG00000035601	GZF1	100	79.466	Cebus_capucinus
MGP_PahariEiJ_G0025852	Gzf1	100	81.793	ENSCATG00000039279	GZF1	100	81.793	Cercocebus_atys
MGP_PahariEiJ_G0025852	Gzf1	100	73.943	ENSCLAG00000014714	GZF1	100	73.261	Chinchilla_lanigera
MGP_PahariEiJ_G0025852	Gzf1	100	81.767	ENSCSAG00000011054	GZF1	100	81.767	Chlorocebus_sabaeus
MGP_PahariEiJ_G0025852	Gzf1	100	71.827	ENSCPBG00000023415	GZF1	100	71.548	Chrysemys_picta_bellii
MGP_PahariEiJ_G0025852	Gzf1	100	81.742	ENSCANG00000041260	GZF1	100	81.882	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0025852	Gzf1	100	88.119	ENSCGRG00001003944	Gzf1	100	87.836	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0025852	Gzf1	100	88.119	ENSCGRG00000012721	Gzf1	100	87.836	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0025852	Gzf1	80	75.304	ENSDNOG00000014290	GZF1	100	77.043	Dasypus_novemcinctus
MGP_PahariEiJ_G0025852	Gzf1	100	80.532	ENSDORG00000011855	Gzf1	100	81.793	Dipodomys_ordii
MGP_PahariEiJ_G0025852	Gzf1	64	75.093	ENSEBUG00000004858	GZF1	59	75.093	Eptatretus_burgeri
MGP_PahariEiJ_G0025852	Gzf1	55	86.364	ENSECAG00000040045	-	100	86.364	Equus_caballus
MGP_PahariEiJ_G0025852	Gzf1	83	46.852	ENSELUG00000013581	GZF1	86	47.874	Esox_lucius
MGP_PahariEiJ_G0025852	Gzf1	100	79.050	ENSFCAG00000006484	GZF1	100	79.050	Felis_catus
MGP_PahariEiJ_G0025852	Gzf1	93	75.624	ENSFDAG00000019468	GZF1	96	75.037	Fukomys_damarensis
MGP_PahariEiJ_G0025852	Gzf1	62	67.302	ENSFHEG00000020498	GZF1	54	67.197	Fundulus_heteroclitus
MGP_PahariEiJ_G0025852	Gzf1	87	47.658	ENSGMOG00000011017	GZF1	100	46.720	Gadus_morhua
MGP_PahariEiJ_G0025852	Gzf1	100	72.524	ENSGALG00000053640	GZF1	100	72.245	Gallus_gallus
MGP_PahariEiJ_G0025852	Gzf1	87	47.627	ENSGACG00000012415	GZF1	99	70.408	Gasterosteus_aculeatus
MGP_PahariEiJ_G0025852	Gzf1	100	81.933	ENSGGOG00000023248	GZF1	100	81.907	Gorilla_gorilla
MGP_PahariEiJ_G0025852	Gzf1	100	74.592	ENSHGLG00000008891	GZF1	100	74.659	Heterocephalus_glaber_female
MGP_PahariEiJ_G0025852	Gzf1	100	74.627	ENSHGLG00100015117	GZF1	100	74.659	Heterocephalus_glaber_male
MGP_PahariEiJ_G0025852	Gzf1	99	41.168	ENSHCOG00000004326	GZF1	57	52.605	Hippocampus_comes
MGP_PahariEiJ_G0025852	Gzf1	100	81.653	ENSSTOG00000009820	GZF1	100	81.653	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0025852	Gzf1	100	83.826	ENSJJAG00000008172	Gzf1	100	83.776	Jaculus_jaculus
MGP_PahariEiJ_G0025852	Gzf1	50	71.579	ENSKMAG00000001453	-	59	71.579	Kryptolebias_marmoratus
MGP_PahariEiJ_G0025852	Gzf1	100	80.282	ENSLAFG00000002458	GZF1	100	81.549	Loxodonta_africana
MGP_PahariEiJ_G0025852	Gzf1	100	81.793	ENSMFAG00000042408	GZF1	100	81.793	Macaca_fascicularis
MGP_PahariEiJ_G0025852	Gzf1	100	81.793	ENSMMUG00000022387	GZF1	100	81.793	Macaca_mulatta
MGP_PahariEiJ_G0025852	Gzf1	100	81.907	ENSMNEG00000033117	GZF1	100	81.907	Macaca_nemestrina
MGP_PahariEiJ_G0025852	Gzf1	100	81.907	ENSMLEG00000036831	GZF1	100	81.907	Mandrillus_leucophaeus
MGP_PahariEiJ_G0025852	Gzf1	99	44.414	ENSMAMG00000011931	-	87	44.260	Mastacembelus_armatus
MGP_PahariEiJ_G0025852	Gzf1	53	77.431	ENSMGAG00000003137	GZF1	100	77.431	Meleagris_gallopavo
MGP_PahariEiJ_G0025852	Gzf1	87	90.404	ENSMAUG00000019656	Gzf1	100	90.741	Mesocricetus_auratus
MGP_PahariEiJ_G0025852	Gzf1	100	81.039	ENSMICG00000046070	GZF1	100	81.320	Microcebus_murinus
MGP_PahariEiJ_G0025852	Gzf1	100	88.136	ENSMOCG00000017816	Gzf1	100	87.994	Microtus_ochrogaster
MGP_PahariEiJ_G0025852	Gzf1	87	48.203	ENSMMOG00000004395	-	75	47.403	Mola_mola
MGP_PahariEiJ_G0025852	Gzf1	100	73.919	ENSMODG00000006238	GZF1	100	81.154	Monodelphis_domestica
MGP_PahariEiJ_G0025852	Gzf1	100	97.743	MGP_CAROLIEiJ_G0024409	Gzf1	100	97.743	Mus_caroli
MGP_PahariEiJ_G0025852	Gzf1	100	97.878	ENSMUSG00000027439	Gzf1	100	97.878	Mus_musculus
MGP_PahariEiJ_G0025852	Gzf1	100	98.020	MGP_SPRETEiJ_G0025327	Gzf1	100	98.020	Mus_spretus
MGP_PahariEiJ_G0025852	Gzf1	100	78.522	ENSMPUG00000001160	GZF1	89	78.212	Mustela_putorius_furo
MGP_PahariEiJ_G0025852	Gzf1	98	76.748	ENSMLUG00000002194	GZF1	100	76.605	Myotis_lucifugus
MGP_PahariEiJ_G0025852	Gzf1	100	86.460	ENSNGAG00000024012	Gzf1	100	86.178	Nannospalax_galili
MGP_PahariEiJ_G0025852	Gzf1	85	41.991	ENSNBRG00000019987	GZF1	98	44.481	Neolamprologus_brichardi
MGP_PahariEiJ_G0025852	Gzf1	100	81.461	ENSNLEG00000011565	GZF1	100	81.461	Nomascus_leucogenys
MGP_PahariEiJ_G0025852	Gzf1	100	73.757	ENSOPRG00000004697	GZF1	100	74.931	Ochotona_princeps
MGP_PahariEiJ_G0025852	Gzf1	100	71.308	ENSODEG00000013020	GZF1	100	71.871	Octodon_degus
MGP_PahariEiJ_G0025852	Gzf1	87	47.981	ENSONIG00000000989	GZF1	100	47.981	Oreochromis_niloticus
MGP_PahariEiJ_G0025852	Gzf1	100	77.496	ENSOCUG00000025214	GZF1	100	78.622	Oryctolagus_cuniculus
MGP_PahariEiJ_G0025852	Gzf1	100	80.028	ENSOGAG00000028389	GZF1	100	80.309	Otolemur_garnettii
MGP_PahariEiJ_G0025852	Gzf1	100	81.882	ENSPPAG00000028487	GZF1	100	81.716	Pan_paniscus
MGP_PahariEiJ_G0025852	Gzf1	100	79.050	ENSPPRG00000010040	GZF1	100	79.050	Panthera_pardus
MGP_PahariEiJ_G0025852	Gzf1	100	79.190	ENSPTIG00000019328	GZF1	100	79.190	Panthera_tigris_altaica
MGP_PahariEiJ_G0025852	Gzf1	100	81.627	ENSPTRG00000013320	GZF1	100	81.601	Pan_troglodytes
MGP_PahariEiJ_G0025852	Gzf1	100	81.767	ENSPANG00000017419	GZF1	100	81.767	Papio_anubis
MGP_PahariEiJ_G0025852	Gzf1	89	50.153	ENSPKIG00000003781	GZF1	79	49.617	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0025852	Gzf1	100	71.770	ENSPSIG00000014455	GZF1	100	71.827	Pelodiscus_sinensis
MGP_PahariEiJ_G0025852	Gzf1	61	53.409	ENSPMGG00000003778	-	66	54.733	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0025852	Gzf1	100	89.816	ENSPEMG00000011285	Gzf1	100	89.816	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0025852	Gzf1	100	74.059	ENSPCIG00000013803	GZF1	100	73.640	Phascolarctos_cinereus
MGP_PahariEiJ_G0025852	Gzf1	87	47.961	ENSPFOG00000002393	GZF1	100	47.308	Poecilia_formosa
MGP_PahariEiJ_G0025852	Gzf1	87	45.946	ENSPLAG00000005232	GZF1	93	45.628	Poecilia_latipinna
MGP_PahariEiJ_G0025852	Gzf1	89	41.206	ENSPMEG00000020017	-	70	41.206	Poecilia_mexicana
MGP_PahariEiJ_G0025852	Gzf1	89	41.121	ENSPREG00000016398	GZF1	72	42.631	Poecilia_reticulata
MGP_PahariEiJ_G0025852	Gzf1	100	81.128	ENSPPYG00000010766	GZF1	100	63.329	Pongo_abelii
MGP_PahariEiJ_G0025852	Gzf1	82	81.678	ENSPCAG00000007544	GZF1	100	80.993	Procavia_capensis
MGP_PahariEiJ_G0025852	Gzf1	100	81.716	ENSPCOG00000024180	GZF1	100	81.997	Propithecus_coquereli
MGP_PahariEiJ_G0025852	Gzf1	100	78.451	ENSPVAG00000014056	GZF1	100	79.577	Pteropus_vampyrus
MGP_PahariEiJ_G0025852	Gzf1	100	96.328	ENSRNOG00000004735	Gzf1	100	96.328	Rattus_norvegicus
MGP_PahariEiJ_G0025852	Gzf1	100	81.844	ENSRBIG00000028715	GZF1	100	81.844	Rhinopithecus_bieti
MGP_PahariEiJ_G0025852	Gzf1	100	82.073	ENSRROG00000030533	GZF1	100	82.073	Rhinopithecus_roxellana
MGP_PahariEiJ_G0025852	Gzf1	100	79.747	ENSSBOG00000018893	GZF1	100	79.044	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0025852	Gzf1	100	73.840	ENSSHAG00000009367	GZF1	100	73.743	Sarcophilus_harrisii
MGP_PahariEiJ_G0025852	Gzf1	89	48.886	ENSSFOG00015008631	gzf1	75	48.209	Scleropages_formosus
MGP_PahariEiJ_G0025852	Gzf1	88	46.837	ENSSDUG00000008186	GZF1	74	46.942	Seriola_dumerili
MGP_PahariEiJ_G0025852	Gzf1	88	47.201	ENSSLDG00000002382	GZF1	74	47.158	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0025852	Gzf1	81	86.352	ENSSARG00000010285	GZF1	79	86.352	Sorex_araneus
MGP_PahariEiJ_G0025852	Gzf1	99	63.735	ENSSPUG00000004147	GZF1	100	66.621	Sphenodon_punctatus
MGP_PahariEiJ_G0025852	Gzf1	85	45.931	ENSSPAG00000011759	GZF1	75	45.985	Stegastes_partitus
MGP_PahariEiJ_G0025852	Gzf1	85	74.104	ENSSSCG00000007117	GZF1	100	73.779	Sus_scrofa
MGP_PahariEiJ_G0025852	Gzf1	53	83.217	ENSTGUG00000007503	GZF1	98	83.217	Taeniopygia_guttata
MGP_PahariEiJ_G0025852	Gzf1	61	68.317	ENSTRUG00000006128	-	56	60.000	Takifugu_rubripes
MGP_PahariEiJ_G0025852	Gzf1	87	45.787	ENSTNIG00000010722	GZF1	73	67.559	Tetraodon_nigroviridis
MGP_PahariEiJ_G0025852	Gzf1	100	75.278	ENSTTRG00000011345	GZF1	100	75.278	Tursiops_truncatus
MGP_PahariEiJ_G0025852	Gzf1	55	83.182	ENSUAMG00000021858	-	100	83.182	Ursus_americanus
MGP_PahariEiJ_G0025852	Gzf1	100	78.522	ENSUMAG00000004065	GZF1	100	78.352	Ursus_maritimus
MGP_PahariEiJ_G0025852	Gzf1	100	78.873	ENSVVUG00000012086	GZF1	100	78.873	Vulpes_vulpes
MGP_PahariEiJ_G0025852	Gzf1	99	58.782	ENSXETG00000004510	gzf1	99	58.782	Xenopus_tropicalis
MGP_PahariEiJ_G0025852	Gzf1	89	46.687	ENSXMAG00000023249	GZF1	75	45.370	Xiphophorus_maculatus