EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0025996 (Gene tree)
Gene ID: 110319611
Gene Symbol: Rbm12
Alias: 5730420G12Rik|9430070C08Rik|SWAN
Full Name: RNA binding motif protein 12
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 20355 bases
Position: chr3:138474104-138494458
Accession: 110319611
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0066609	RRM_1	PF00076.22	6e-29	1	3
MGP_PahariEiJ_P0066609	RRM_1	PF00076.22	6e-29	2	3
MGP_PahariEiJ_P0066609	RRM_1	PF00076.22	6e-29	3	3
MGP_PahariEiJ_P0066610	RRM_1	PF00076.22	6e-29	1	3
MGP_PahariEiJ_P0066610	RRM_1	PF00076.22	6e-29	2	3
MGP_PahariEiJ_P0066610	RRM_1	PF00076.22	6e-29	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0066610	-	6704	-	MGP_PahariEiJ_P0066610	1007 (aa)	XP_021050764	UPI000A30CC0A
MGP_PahariEiJ_T0066611	-	1060	-	MGP_PahariEiJ_P0066611	288 (aa)	-	-
MGP_PahariEiJ_T0066612	-	576	-	MGP_PahariEiJ_P0066612	143 (aa)	-	-
MGP_PahariEiJ_T0066613	-	562	-	MGP_PahariEiJ_P0066613	133 (aa)	-	-
MGP_PahariEiJ_T0066609	-	6672	-	MGP_PahariEiJ_P0066609	1007 (aa)	XP_021050764	UPI000A30CC0A

Gene Model

Click here to download MGP_PahariEiJ_G0025996's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0025996's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0025996	Rbm12	100	93.295	ENSG00000244462	RBM12	100	98.601	Homo_sapiens
MGP_PahariEiJ_G0025996	Rbm12	95	95.373	ENSAMEG00000019189	RBM12	75	94.676	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0025996	Rbm12	88	81.860	ENSACAG00000006330	RBM12	98	81.860	Anolis_carolinensis
MGP_PahariEiJ_G0025996	Rbm12	100	93.153	ENSANAG00000032596	RBM12	98	77.811	Aotus_nancymaae
MGP_PahariEiJ_G0025996	Rbm12	100	86.125	ENSBTAG00000044015	RBM12	100	87.413	Bos_taurus
MGP_PahariEiJ_G0025996	Rbm12	88	96.325	ENSCAFG00000008256	RBM12	98	96.325	Canis_familiaris
MGP_PahariEiJ_G0025996	Rbm12	88	96.055	ENSCAFG00020005650	RBM12	75	95.080	Canis_lupus_dingo
MGP_PahariEiJ_G0025996	Rbm12	100	80.811	ENSCHIG00000024592	RBM12	75	93.237	Capra_hircus
MGP_PahariEiJ_G0025996	Rbm12	94	94.126	ENSTSYG00000030563	RBM12	73	94.126	Carlito_syrichta
MGP_PahariEiJ_G0025996	Rbm12	86	88.167	ENSCAPG00000006176	RBM12	96	87.674	Cavia_aperea
MGP_PahariEiJ_G0025996	Rbm12	100	88.055	ENSCPOG00000035170	RBM12	100	87.858	Cavia_porcellus
MGP_PahariEiJ_G0025996	Rbm12	96	90.772	ENSCCAG00000036056	-	98	76.058	Cebus_capucinus
MGP_PahariEiJ_G0025996	Rbm12	86	89.894	ENSCCAG00000035899	-	100	90.164	Cebus_capucinus
MGP_PahariEiJ_G0025996	Rbm12	100	92.867	ENSCATG00000030934	RBM12	98	78.075	Cercocebus_atys
MGP_PahariEiJ_G0025996	Rbm12	100	91.783	ENSCLAG00000017230	RBM12	100	88.779	Chinchilla_lanigera
MGP_PahariEiJ_G0025996	Rbm12	100	92.867	ENSCANG00000030552	RBM12	98	78.075	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0025996	Rbm12	100	95.134	ENSCGRG00001021144	Rbm12	100	94.439	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0025996	Rbm12	100	95.134	ENSCGRG00000012719	Rbm12	100	94.439	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0025996	Rbm12	100	83.036	ENSDORG00000000606	-	100	82.242	Dipodomys_ordii
MGP_PahariEiJ_G0025996	Rbm12	100	88.515	ENSDORG00000028509	-	100	88.515	Dipodomys_ordii
MGP_PahariEiJ_G0025996	Rbm12	100	84.440	ENSECAG00000021997	RBM12	75	94.245	Equus_caballus
MGP_PahariEiJ_G0025996	Rbm12	59	95.699	ENSEEUG00000008858	-	56	95.699	Erinaceus_europaeus
MGP_PahariEiJ_G0025996	Rbm12	100	92.918	ENSFDAG00000014663	RBM12	100	77.800	Fukomys_damarensis
MGP_PahariEiJ_G0025996	Rbm12	96	78.776	ENSGALG00000030253	RBM12	100	85.714	Gallus_gallus
MGP_PahariEiJ_G0025996	Rbm12	100	93.010	ENSGGOG00000028500	RBM12	98	78.175	Gorilla_gorilla
MGP_PahariEiJ_G0025996	Rbm12	100	94.051	ENSHGLG00000013208	RBM12	100	88.206	Heterocephalus_glaber_female
MGP_PahariEiJ_G0025996	Rbm12	83	96.395	ENSHGLG00100019158	RBM12	90	96.395	Heterocephalus_glaber_male
MGP_PahariEiJ_G0025996	Rbm12	100	90.707	ENSSTOG00000019739	RBM12	100	85.700	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0025996	Rbm12	98	76.618	ENSJJAG00000009879	-	55	87.245	Jaculus_jaculus
MGP_PahariEiJ_G0025996	Rbm12	97	93.642	ENSLAFG00000010341	RBM12	100	77.691	Loxodonta_africana
MGP_PahariEiJ_G0025996	Rbm12	100	92.867	ENSMFAG00000032583	RBM12	98	78.075	Macaca_fascicularis
MGP_PahariEiJ_G0025996	Rbm12	100	93.010	ENSMMUG00000020960	CPNE1	100	78.175	Macaca_mulatta
MGP_PahariEiJ_G0025996	Rbm12	100	93.010	ENSMNEG00000045365	RBM12	98	78.175	Macaca_nemestrina
MGP_PahariEiJ_G0025996	Rbm12	100	93.010	ENSMLEG00000032492	RBM12	98	78.175	Mandrillus_leucophaeus
MGP_PahariEiJ_G0025996	Rbm12	96	79.048	ENSMGAG00000001502	RBM12	100	86.022	Meleagris_gallopavo
MGP_PahariEiJ_G0025996	Rbm12	100	95.829	ENSMAUG00000012800	Rbm12	100	95.829	Mesocricetus_auratus
MGP_PahariEiJ_G0025996	Rbm12	90	94.992	ENSMICG00000032761	-	98	93.488	Microcebus_murinus
MGP_PahariEiJ_G0025996	Rbm12	97	81.439	ENSMICG00000029540	-	95	87.097	Microcebus_murinus
MGP_PahariEiJ_G0025996	Rbm12	100	95.432	ENSMOCG00000012950	Rbm12	100	94.935	Microtus_ochrogaster
MGP_PahariEiJ_G0025996	Rbm12	97	83.190	ENSMODG00000001591	RBM12	98	89.939	Monodelphis_domestica
MGP_PahariEiJ_G0025996	Rbm12	100	98.123	MGP_CAROLIEiJ_G0024551	Rbm12	100	98.123	Mus_caroli
MGP_PahariEiJ_G0025996	Rbm12	100	96.723	ENSMUSG00000089824	Rbm12	100	96.723	Mus_musculus
MGP_PahariEiJ_G0025996	Rbm12	100	97.716	MGP_SPRETEiJ_G0025473	Rbm12	100	97.716	Mus_spretus
MGP_PahariEiJ_G0025996	Rbm12	97	93.931	ENSMPUG00000017789	-	75	93.669	Mustela_putorius_furo
MGP_PahariEiJ_G0025996	Rbm12	100	93.581	ENSMLUG00000011217	RBM12	98	78.458	Myotis_lucifugus
MGP_PahariEiJ_G0025996	Rbm12	100	93.744	ENSNGAG00000015846	Rbm12	100	93.049	Nannospalax_galili
MGP_PahariEiJ_G0025996	Rbm12	100	93.295	ENSNLEG00000010268	RBM12	98	78.373	Nomascus_leucogenys
MGP_PahariEiJ_G0025996	Rbm12	95	83.621	ENSMEUG00000007621	RBM12	74	87.204	Notamacropus_eugenii
MGP_PahariEiJ_G0025996	Rbm12	100	89.945	ENSOPRG00000005687	RBM12	100	84.737	Ochotona_princeps
MGP_PahariEiJ_G0025996	Rbm12	100	85.117	ENSODEG00000013870	RBM12	100	85.214	Octodon_degus
MGP_PahariEiJ_G0025996	Rbm12	100	93.295	ENSPPAG00000040719	RBM12	98	78.373	Pan_paniscus
MGP_PahariEiJ_G0025996	Rbm12	100	93.295	ENSPTRG00000013446	RBM12	98	78.373	Pan_troglodytes
MGP_PahariEiJ_G0025996	Rbm12	100	93.295	ENSPTRG00000040708	-	98	78.373	Pan_troglodytes
MGP_PahariEiJ_G0025996	Rbm12	100	93.010	ENSPANG00000020003	CPNE1	98	78.175	Papio_anubis
MGP_PahariEiJ_G0025996	Rbm12	81	85.231	ENSPSIG00000007369	RBM12	98	85.231	Pelodiscus_sinensis
MGP_PahariEiJ_G0025996	Rbm12	100	96.922	ENSPEMG00000017769	Rbm12	100	96.922	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0025996	Rbm12	55	82.609	ENSPFOG00000023551	rbm12	89	78.873	Poecilia_formosa
MGP_PahariEiJ_G0025996	Rbm12	100	93.153	ENSPPYG00000010960	RBM12	100	78.196	Pongo_abelii
MGP_PahariEiJ_G0025996	Rbm12	95	92.341	ENSPCAG00000008653	RBM12	76	89.736	Procavia_capensis
MGP_PahariEiJ_G0025996	Rbm12	98	93.966	ENSPCOG00000023724	RBM12	73	93.957	Propithecus_coquereli
MGP_PahariEiJ_G0025996	Rbm12	84	93.723	ENSPVAG00000014937	RBM12	75	93.957	Pteropus_vampyrus
MGP_PahariEiJ_G0025996	Rbm12	70	97.159	ENSRNOG00000049913	LOC100910990	100	93.120	Rattus_norvegicus
MGP_PahariEiJ_G0025996	Rbm12	70	97.159	ENSRNOG00000019723	Rbm12	100	93.120	Rattus_norvegicus
MGP_PahariEiJ_G0025996	Rbm12	100	92.867	ENSRBIG00000042965	RBM12	98	78.075	Rhinopithecus_bieti
MGP_PahariEiJ_G0025996	Rbm12	100	92.867	ENSRROG00000037485	RBM12	98	78.075	Rhinopithecus_roxellana
MGP_PahariEiJ_G0025996	Rbm12	100	93.010	ENSSBOG00000027633	RBM12	98	77.712	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0025996	Rbm12	95	83.654	ENSSHAG00000018585	RBM12	100	89.939	Sarcophilus_harrisii
MGP_PahariEiJ_G0025996	Rbm12	100	93.017	ENSSSCG00000036156	RBM12	100	86.720	Sus_scrofa
MGP_PahariEiJ_G0025996	Rbm12	90	86.000	ENSTGUG00000003002	RBM12	100	85.518	Taeniopygia_guttata
MGP_PahariEiJ_G0025996	Rbm12	100	93.438	ENSTTRG00000017035	RBM12	75	93.669	Tursiops_truncatus
MGP_PahariEiJ_G0025996	Rbm12	98	94.948	ENSUAMG00000010430	RBM12	75	93.983	Ursus_americanus
MGP_PahariEiJ_G0025996	Rbm12	89	100.000	ENSVPAG00000003812	RBM12	91	100.000	Vicugna_pacos
MGP_PahariEiJ_G0025996	Rbm12	88	63.861	ENSXETG00000033541	RBM12	72	62.768	Xenopus_tropicalis