EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0026141 (Gene tree)
Gene ID: 110317529
Gene Symbol: Stau1
Alias: 5830401L18Rik
Full Name: staufen double-stranded RNA binding protein 1
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 45452 bases
Position: chr3:149233900-149279351
Accession: 110317529
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0067266	dsrm	PF00035.26	3.7e-26	1	2
MGP_PahariEiJ_P0067266	dsrm	PF00035.26	3.7e-26	2	2
MGP_PahariEiJ_P0067263	dsrm	PF00035.26	4e-26	1	2
MGP_PahariEiJ_P0067263	dsrm	PF00035.26	4e-26	2	2
MGP_PahariEiJ_P0067262	dsrm	PF00035.26	7e-23	1	2
MGP_PahariEiJ_P0067262	dsrm	PF00035.26	7e-23	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0067270	-	341	-	-	- (aa)	-	-
MGP_PahariEiJ_T0067262	-	2970	-	MGP_PahariEiJ_P0067262	495 (aa)	-	-
MGP_PahariEiJ_T0067263	-	2853	XM_021192007	MGP_PahariEiJ_P0067263	487 (aa)	XP_021047666	UPI000A30B195
MGP_PahariEiJ_T0067261	-	3449	-	-	- (aa)	-	-
MGP_PahariEiJ_T0067266	-	1712	-	MGP_PahariEiJ_P0067266	489 (aa)	-	UPI000A30EA3F
MGP_PahariEiJ_T0067267	-	889	-	-	- (aa)	-	-
MGP_PahariEiJ_T0067264	-	783	-	-	- (aa)	-	-
MGP_PahariEiJ_T0067265	-	1513	-	MGP_PahariEiJ_P0067265	436 (aa)	-	-
MGP_PahariEiJ_T0067268	-	803	-	-	- (aa)	-	-
MGP_PahariEiJ_T0067269	-	797	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0026141's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0026141's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0026141	Stau1	51	31.395	MGP_PahariEiJ_G0025139	Prkra	53	31.395
MGP_PahariEiJ_G0026141	Stau1	85	48.046	MGP_PahariEiJ_G0023852	Stau2	84	47.816

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0026141	Stau1	100	91.786	ENSG00000124214	STAU1	99	91.786	Homo_sapiens
MGP_PahariEiJ_G0026141	Stau1	99	69.838	ENSAPOG00000017260	stau1	71	69.838	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0026141	Stau1	99	90.103	ENSAMEG00000013681	STAU1	69	90.103	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0026141	Stau1	99	71.166	ENSACIG00000015918	stau1	71	71.837	Amphilophus_citrinellus
MGP_PahariEiJ_G0026141	Stau1	99	70.850	ENSAOCG00000012224	stau1	71	70.850	Amphiprion_ocellaris
MGP_PahariEiJ_G0026141	Stau1	99	71.053	ENSAPEG00000012308	stau1	71	71.053	Amphiprion_percula
MGP_PahariEiJ_G0026141	Stau1	99	71.079	ENSATEG00000024600	stau1	73	71.224	Anabas_testudineus
MGP_PahariEiJ_G0026141	Stau1	99	83.503	ENSAPLG00000010527	STAU1	69	83.673	Anas_platyrhynchos
MGP_PahariEiJ_G0026141	Stau1	99	83.333	ENSACAG00000015909	STAU1	70	83.333	Anolis_carolinensis
MGP_PahariEiJ_G0026141	Stau1	100	91.313	ENSANAG00000032714	STAU1	99	85.890	Aotus_nancymaae
MGP_PahariEiJ_G0026141	Stau1	99	70.243	ENSACLG00000012270	stau1	71	70.243	Astatotilapia_calliptera
MGP_PahariEiJ_G0026141	Stau1	100	68.902	ENSAMXG00000016812	stau1	84	68.902	Astyanax_mexicanus
MGP_PahariEiJ_G0026141	Stau1	100	89.571	ENSBTAG00000000241	STAU1	85	89.571	Bos_taurus
MGP_PahariEiJ_G0026141	Stau1	100	91.616	ENSCJAG00000016233	STAU1	85	91.616	Callithrix_jacchus
MGP_PahariEiJ_G0026141	Stau1	100	90.593	ENSCAFG00000011347	STAU1	83	90.593	Canis_familiaris
MGP_PahariEiJ_G0026141	Stau1	100	89.315	ENSCAFG00020017123	STAU1	82	89.315	Canis_lupus_dingo
MGP_PahariEiJ_G0026141	Stau1	100	89.571	ENSCHIG00000001799	-	100	82.485	Capra_hircus
MGP_PahariEiJ_G0026141	Stau1	100	89.366	ENSTSYG00000036179	-	85	89.366	Carlito_syrichta
MGP_PahariEiJ_G0026141	Stau1	100	88.501	ENSCAPG00000017041	STAU1	99	88.501	Cavia_aperea
MGP_PahariEiJ_G0026141	Stau1	100	87.475	ENSCPOG00000005566	STAU1	100	87.475	Cavia_porcellus
MGP_PahariEiJ_G0026141	Stau1	100	91.111	ENSCCAG00000034339	STAU1	85	91.111	Cebus_capucinus
MGP_PahariEiJ_G0026141	Stau1	100	91.616	ENSCATG00000028474	STAU1	99	91.313	Cercocebus_atys
MGP_PahariEiJ_G0026141	Stau1	100	91.515	ENSCLAG00000006516	-	100	91.515	Chinchilla_lanigera
MGP_PahariEiJ_G0026141	Stau1	100	73.931	ENSCLAG00000002784	-	98	73.931	Chinchilla_lanigera
MGP_PahariEiJ_G0026141	Stau1	100	91.411	ENSCSAG00000014986	STAU1	99	91.411	Chlorocebus_sabaeus
MGP_PahariEiJ_G0026141	Stau1	100	90.204	ENSCHOG00000001511	STAU1	85	90.204	Choloepus_hoffmanni
MGP_PahariEiJ_G0026141	Stau1	99	83.333	ENSCPBG00000026741	STAU1	71	83.333	Chrysemys_picta_bellii
MGP_PahariEiJ_G0026141	Stau1	100	91.411	ENSCANG00000039220	STAU1	99	81.855	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0026141	Stau1	100	96.970	ENSCGRG00001013453	Stau1	100	96.970	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0026141	Stau1	100	96.970	ENSCGRG00000007216	Stau1	100	96.970	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0026141	Stau1	99	65.369	ENSCSEG00000000792	stau1	68	66.122	Cynoglossus_semilaevis
MGP_PahariEiJ_G0026141	Stau1	99	68.313	ENSCVAG00000005906	stau1	86	68.994	Cyprinodon_variegatus
MGP_PahariEiJ_G0026141	Stau1	99	69.697	ENSDARG00000044182	stau1	78	69.697	Danio_rerio
MGP_PahariEiJ_G0026141	Stau1	100	90.612	ENSDNOG00000014933	STAU1	83	90.612	Dasypus_novemcinctus
MGP_PahariEiJ_G0026141	Stau1	100	87.526	ENSDORG00000030220	Stau1	100	87.526	Dipodomys_ordii
MGP_PahariEiJ_G0026141	Stau1	85	89.701	ENSETEG00000018235	STAU1	72	89.701	Echinops_telfairi
MGP_PahariEiJ_G0026141	Stau1	100	91.002	ENSEASG00005023343	STAU1	100	87.560	Equus_asinus_asinus
MGP_PahariEiJ_G0026141	Stau1	100	90.798	ENSECAG00000012894	STAU1	85	90.798	Equus_caballus
MGP_PahariEiJ_G0026141	Stau1	81	91.392	ENSEEUG00000014344	STAU1	68	91.392	Erinaceus_europaeus
MGP_PahariEiJ_G0026141	Stau1	99	69.522	ENSELUG00000002529	stau1	77	69.522	Esox_lucius
MGP_PahariEiJ_G0026141	Stau1	100	91.616	ENSFCAG00000001447	STAU1	99	84.458	Felis_catus
MGP_PahariEiJ_G0026141	Stau1	99	82.510	ENSFALG00000012940	STAU1	70	82.510	Ficedula_albicollis
MGP_PahariEiJ_G0026141	Stau1	100	90.505	ENSFDAG00000014119	-	100	90.505	Fukomys_damarensis
MGP_PahariEiJ_G0026141	Stau1	99	68.443	ENSFDAG00000020837	-	98	68.443	Fukomys_damarensis
MGP_PahariEiJ_G0026141	Stau1	99	69.838	ENSFHEG00000013517	stau1	85	70.143	Fundulus_heteroclitus
MGP_PahariEiJ_G0026141	Stau1	99	59.687	ENSGMOG00000016850	stau1	71	59.687	Gadus_morhua
MGP_PahariEiJ_G0026141	Stau1	99	84.362	ENSGALG00000004736	STAU1	70	84.362	Gallus_gallus
MGP_PahariEiJ_G0026141	Stau1	99	69.980	ENSGAFG00000010437	stau1	71	69.980	Gambusia_affinis
MGP_PahariEiJ_G0026141	Stau1	99	70.101	ENSGACG00000001352	stau1	72	70.101	Gasterosteus_aculeatus
MGP_PahariEiJ_G0026141	Stau1	99	83.333	ENSGAGG00000009825	STAU1	70	83.333	Gopherus_agassizii
MGP_PahariEiJ_G0026141	Stau1	100	91.111	ENSGGOG00000025351	STAU1	100	92.329	Gorilla_gorilla
MGP_PahariEiJ_G0026141	Stau1	99	70.445	ENSHBUG00000023668	stau1	71	70.445	Haplochromis_burtoni
MGP_PahariEiJ_G0026141	Stau1	100	91.616	ENSHGLG00000008730	STAU1	100	91.616	Heterocephalus_glaber_female
MGP_PahariEiJ_G0026141	Stau1	100	91.616	ENSHGLG00100000098	STAU1	100	91.616	Heterocephalus_glaber_male
MGP_PahariEiJ_G0026141	Stau1	99	68.635	ENSHCOG00000018461	stau1	70	68.635	Hippocampus_comes
MGP_PahariEiJ_G0026141	Stau1	94	69.330	ENSIPUG00000023725	stau1	70	69.330	Ictalurus_punctatus
MGP_PahariEiJ_G0026141	Stau1	100	91.820	ENSSTOG00000003634	STAU1	100	91.820	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0026141	Stau1	100	91.002	ENSJJAG00000020032	Stau1	100	91.002	Jaculus_jaculus
MGP_PahariEiJ_G0026141	Stau1	99	68.443	ENSKMAG00000007135	stau1	71	69.121	Kryptolebias_marmoratus
MGP_PahariEiJ_G0026141	Stau1	99	68.136	ENSLBEG00000020172	stau1	71	68.136	Labrus_bergylta
MGP_PahariEiJ_G0026141	Stau1	99	78.323	ENSLACG00000016157	STAU1	70	77.062	Latimeria_chalumnae
MGP_PahariEiJ_G0026141	Stau1	99	74.694	ENSLOCG00000003134	stau1	71	74.694	Lepisosteus_oculatus
MGP_PahariEiJ_G0026141	Stau1	100	89.162	ENSLAFG00000003238	STAU1	96	89.162	Loxodonta_africana
MGP_PahariEiJ_G0026141	Stau1	100	91.616	ENSMFAG00000040931	STAU1	100	94.853	Macaca_fascicularis
MGP_PahariEiJ_G0026141	Stau1	100	91.313	ENSMMUG00000002302	STAU1	100	94.853	Macaca_mulatta
MGP_PahariEiJ_G0026141	Stau1	100	91.616	ENSMNEG00000033821	STAU1	99	91.313	Macaca_nemestrina
MGP_PahariEiJ_G0026141	Stau1	100	91.616	ENSMLEG00000031383	STAU1	85	91.616	Mandrillus_leucophaeus
MGP_PahariEiJ_G0026141	Stau1	99	71.487	ENSMAMG00000017586	stau1	74	71.633	Mastacembelus_armatus
MGP_PahariEiJ_G0026141	Stau1	99	70.243	ENSMZEG00005015605	stau1	71	70.243	Maylandia_zebra
MGP_PahariEiJ_G0026141	Stau1	99	83.707	ENSMGAG00000004719	STAU1	69	83.878	Meleagris_gallopavo
MGP_PahariEiJ_G0026141	Stau1	100	96.364	ENSMAUG00000013846	Stau1	100	96.364	Mesocricetus_auratus
MGP_PahariEiJ_G0026141	Stau1	100	90.101	ENSMICG00000001995	STAU1	85	90.101	Microcebus_murinus
MGP_PahariEiJ_G0026141	Stau1	100	97.172	ENSMOCG00000018743	Stau1	100	97.172	Microtus_ochrogaster
MGP_PahariEiJ_G0026141	Stau1	100	69.262	ENSMMOG00000015455	stau1	98	69.530	Mola_mola
MGP_PahariEiJ_G0026141	Stau1	100	87.526	ENSMODG00000016276	STAU1	73	87.526	Monodelphis_domestica
MGP_PahariEiJ_G0026141	Stau1	99	70.850	ENSMALG00000000045	stau1	71	70.850	Monopterus_albus
MGP_PahariEiJ_G0026141	Stau1	100	99.192	MGP_CAROLIEiJ_G0024699	Stau1	100	99.192	Mus_caroli
MGP_PahariEiJ_G0026141	Stau1	100	98.788	ENSMUSG00000039536	Stau1	100	98.788	Mus_musculus
MGP_PahariEiJ_G0026141	Stau1	100	98.384	MGP_SPRETEiJ_G0025619	Stau1	100	98.384	Mus_spretus
MGP_PahariEiJ_G0026141	Stau1	99	91.134	ENSMPUG00000017581	STAU1	72	91.322	Mustela_putorius_furo
MGP_PahariEiJ_G0026141	Stau1	100	89.775	ENSMLUG00000008407	STAU1	83	89.775	Myotis_lucifugus
MGP_PahariEiJ_G0026141	Stau1	100	93.333	ENSNGAG00000007108	Stau1	100	93.333	Nannospalax_galili
MGP_PahariEiJ_G0026141	Stau1	99	70.445	ENSNBRG00000017596	stau1	71	70.445	Neolamprologus_brichardi
MGP_PahariEiJ_G0026141	Stau1	100	91.002	ENSNLEG00000006955	STAU1	99	90.707	Nomascus_leucogenys
MGP_PahariEiJ_G0026141	Stau1	94	87.879	ENSMEUG00000003263	STAU1	80	87.879	Notamacropus_eugenii
MGP_PahariEiJ_G0026141	Stau1	100	89.388	ENSOPRG00000014569	STAU1	86	89.388	Ochotona_princeps
MGP_PahariEiJ_G0026141	Stau1	100	91.786	ENSODEG00000006523	STAU1	99	91.786	Octodon_degus
MGP_PahariEiJ_G0026141	Stau1	99	70.648	ENSONIG00000004152	stau1	68	70.648	Oreochromis_niloticus
MGP_PahariEiJ_G0026141	Stau1	99	82.724	ENSOANG00000006394	STAU1	70	82.724	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0026141	Stau1	100	89.366	ENSOCUG00000006214	STAU1	85	89.366	Oryctolagus_cuniculus
MGP_PahariEiJ_G0026141	Stau1	99	68.902	ENSOMEG00000002388	stau1	71	68.902	Oryzias_melastigma
MGP_PahariEiJ_G0026141	Stau1	100	91.411	ENSOGAG00000002127	STAU1	83	91.411	Otolemur_garnettii
MGP_PahariEiJ_G0026141	Stau1	100	62.777	ENSOGAG00000028222	-	98	62.777	Otolemur_garnettii
MGP_PahariEiJ_G0026141	Stau1	100	89.571	ENSOARG00000012204	STAU1	83	89.571	Ovis_aries
MGP_PahariEiJ_G0026141	Stau1	100	91.111	ENSPPAG00000032023	STAU1	100	92.329	Pan_paniscus
MGP_PahariEiJ_G0026141	Stau1	100	91.616	ENSPPRG00000003436	STAU1	99	91.616	Panthera_pardus
MGP_PahariEiJ_G0026141	Stau1	100	91.616	ENSPTIG00000011768	STAU1	99	90.323	Panthera_tigris_altaica
MGP_PahariEiJ_G0026141	Stau1	100	91.111	ENSPTRG00000023130	STAU1	100	92.329	Pan_troglodytes
MGP_PahariEiJ_G0026141	Stau1	100	91.411	ENSPANG00000020560	STAU1	99	85.861	Papio_anubis
MGP_PahariEiJ_G0026141	Stau1	99	71.457	ENSPKIG00000024588	stau1	71	71.457	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0026141	Stau1	99	83.128	ENSPSIG00000010731	STAU1	70	83.128	Pelodiscus_sinensis
MGP_PahariEiJ_G0026141	Stau1	99	70.183	ENSPMGG00000018553	stau1	98	67.623	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0026141	Stau1	100	96.768	ENSPEMG00000022045	Stau1	100	96.768	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0026141	Stau1	100	87.526	ENSPCIG00000023269	STAU1	99	82.413	Phascolarctos_cinereus
MGP_PahariEiJ_G0026141	Stau1	99	70.040	ENSPFOG00000017253	stau1	71	70.040	Poecilia_formosa
MGP_PahariEiJ_G0026141	Stau1	71	62.420	ENSPLAG00000014829	stau1	77	66.013	Poecilia_latipinna
MGP_PahariEiJ_G0026141	Stau1	93	69.048	ENSPMEG00000007495	stau1	67	69.048	Poecilia_mexicana
MGP_PahariEiJ_G0026141	Stau1	99	69.433	ENSPREG00000003477	stau1	71	69.433	Poecilia_reticulata
MGP_PahariEiJ_G0026141	Stau1	100	91.002	ENSPPYG00000011111	STAU1	85	91.002	Pongo_abelii
MGP_PahariEiJ_G0026141	Stau1	93	81.140	ENSPCAG00000002459	STAU1	84	81.140	Procavia_capensis
MGP_PahariEiJ_G0026141	Stau1	100	90.389	ENSPCOG00000027746	STAU1	99	90.303	Propithecus_coquereli
MGP_PahariEiJ_G0026141	Stau1	84	93.069	ENSPVAG00000015019	STAU1	71	93.069	Pteropus_vampyrus
MGP_PahariEiJ_G0026141	Stau1	99	70.445	ENSPNYG00000014436	stau1	71	70.445	Pundamilia_nyererei
MGP_PahariEiJ_G0026141	Stau1	99	69.028	ENSPNAG00000011323	stau1	76	69.028	Pygocentrus_nattereri
MGP_PahariEiJ_G0026141	Stau1	100	98.990	ENSRNOG00000007781	Stau1	100	98.990	Rattus_norvegicus
MGP_PahariEiJ_G0026141	Stau1	100	91.313	ENSRBIG00000037345	STAU1	99	91.313	Rhinopithecus_bieti
MGP_PahariEiJ_G0026141	Stau1	100	91.616	ENSRROG00000039008	STAU1	99	91.224	Rhinopithecus_roxellana
MGP_PahariEiJ_G0026141	Stau1	100	91.411	ENSSBOG00000034448	STAU1	99	87.321	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0026141	Stau1	100	87.526	ENSSHAG00000009492	STAU1	83	87.526	Sarcophilus_harrisii
MGP_PahariEiJ_G0026141	Stau1	99	73.673	ENSSFOG00015021497	stau1	85	70.588	Scleropages_formosus
MGP_PahariEiJ_G0026141	Stau1	99	71.053	ENSSMAG00000017410	stau1	71	71.053	Scophthalmus_maximus
MGP_PahariEiJ_G0026141	Stau1	99	71.660	ENSSDUG00000019439	stau1	71	71.660	Seriola_dumerili
MGP_PahariEiJ_G0026141	Stau1	99	71.660	ENSSLDG00000025040	stau1	71	71.660	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0026141	Stau1	99	82.317	ENSSPUG00000017983	STAU1	73	82.449	Sphenodon_punctatus
MGP_PahariEiJ_G0026141	Stau1	99	71.053	ENSSPAG00000019275	stau1	71	71.053	Stegastes_partitus
MGP_PahariEiJ_G0026141	Stau1	100	90.389	ENSSSCG00000027444	STAU1	99	90.389	Sus_scrofa
MGP_PahariEiJ_G0026141	Stau1	99	83.333	ENSTGUG00000008784	STAU1	69	83.503	Taeniopygia_guttata
MGP_PahariEiJ_G0026141	Stau1	99	70.961	ENSTRUG00000005837	stau1	70	71.633	Takifugu_rubripes
MGP_PahariEiJ_G0026141	Stau1	99	69.433	ENSTNIG00000014732	stau1	73	69.433	Tetraodon_nigroviridis
MGP_PahariEiJ_G0026141	Stau1	100	76.939	ENSTBEG00000009404	STAU1	85	76.939	Tupaia_belangeri
MGP_PahariEiJ_G0026141	Stau1	94	86.797	ENSTTRG00000004285	STAU1	80	86.797	Tursiops_truncatus
MGP_PahariEiJ_G0026141	Stau1	100	88.911	ENSUAMG00000025449	STAU1	99	88.911	Ursus_americanus
MGP_PahariEiJ_G0026141	Stau1	96	84.941	ENSUMAG00000024475	STAU1	98	84.941	Ursus_maritimus
MGP_PahariEiJ_G0026141	Stau1	100	89.980	ENSVPAG00000001313	STAU1	85	89.980	Vicugna_pacos
MGP_PahariEiJ_G0026141	Stau1	100	89.516	ENSVVUG00000022325	STAU1	73	89.516	Vulpes_vulpes
MGP_PahariEiJ_G0026141	Stau1	99	76.749	ENSXETG00000001783	stau1	70	76.955	Xenopus_tropicalis
MGP_PahariEiJ_G0026141	Stau1	62	64.234	ENSXCOG00000008804	stau1	72	66.312	Xiphophorus_couchianus
MGP_PahariEiJ_G0026141	Stau1	99	69.980	ENSXMAG00000016175	stau1	71	69.980	Xiphophorus_maculatus