EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0026164 (Gene tree)
Gene ID: 110319172
Gene Symbol: Sall4
Alias: 5730441M18Rik|C330011P20Rik|Tex20
Full Name: spalt like transcription factor 4
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 18416 bases
Position: chr3:151050444-151068859
Accession: 110319172
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0067376	zf-C2H2	PF00096.26	2.4e-28	1	6
MGP_PahariEiJ_P0067376	zf-C2H2	PF00096.26	2.4e-28	2	6
MGP_PahariEiJ_P0067376	zf-C2H2	PF00096.26	2.4e-28	3	6
MGP_PahariEiJ_P0067376	zf-C2H2	PF00096.26	2.4e-28	4	6
MGP_PahariEiJ_P0067376	zf-C2H2	PF00096.26	2.4e-28	5	6
MGP_PahariEiJ_P0067376	zf-C2H2	PF00096.26	2.4e-28	6	6
MGP_PahariEiJ_P0067378	zf-C2H2	PF00096.26	1.9e-13	1	2
MGP_PahariEiJ_P0067378	zf-C2H2	PF00096.26	1.9e-13	2	2
MGP_PahariEiJ_P0067375	zf-C2H2	PF00096.26	3.2e-11	1	2
MGP_PahariEiJ_P0067375	zf-C2H2	PF00096.26	3.2e-11	2	2
MGP_PahariEiJ_P0067377	zf-C2H2	PF00096.26	5.3e-08	1	2
MGP_PahariEiJ_P0067377	zf-C2H2	PF00096.26	5.3e-08	2	2
MGP_PahariEiJ_P0067376	zf-met	PF12874.7	3.3e-13	1	1
MGP_PahariEiJ_P0067378	zf-met	PF12874.7	1.3e-09	1	2
MGP_PahariEiJ_P0067378	zf-met	PF12874.7	1.3e-09	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0067378	-	393	-	MGP_PahariEiJ_P0067378	131 (aa)	-	-
MGP_PahariEiJ_T0067379	-	773	-	MGP_PahariEiJ_P0067379	215 (aa)	-	-
MGP_PahariEiJ_T0067375	-	2485	-	MGP_PahariEiJ_P0067375	276 (aa)	-	-
MGP_PahariEiJ_T0067376	-	5063	-	MGP_PahariEiJ_P0067376	1079 (aa)	XP_021050273	UPI000A312EEB
MGP_PahariEiJ_T0067377	-	3731	-	MGP_PahariEiJ_P0067377	635 (aa)	XP_021050275	UPI000A30F9B1
MGP_PahariEiJ_T0067381	-	324	-	-	- (aa)	-	-
MGP_PahariEiJ_T0067380	-	438	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0026164's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0026164's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0026164	Sall4	95	64.706	MGP_PahariEiJ_G0022961	Sall1	95	64.706
MGP_PahariEiJ_G0026164	Sall4	64	53.333	MGP_PahariEiJ_G0019173	Zfp236	77	53.333
MGP_PahariEiJ_G0026164	Sall4	98	84.507	MGP_PahariEiJ_G0019170	Sall3	66	65.385

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0026164	Sall4	100	95.833	ENSG00000101115	SALL4	100	75.200	Homo_sapiens
MGP_PahariEiJ_G0026164	Sall4	100	84.722	ENSAPOG00000002465	sall4	100	41.438	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0026164	Sall4	100	95.833	ENSAMEG00000013250	-	100	71.599	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0026164	Sall4	93	80.556	ENSACIG00000017298	sall4	100	40.136	Amphilophus_citrinellus
MGP_PahariEiJ_G0026164	Sall4	100	84.722	ENSAOCG00000023678	sall4	100	41.866	Amphiprion_ocellaris
MGP_PahariEiJ_G0026164	Sall4	100	84.722	ENSAPEG00000000751	sall4	100	41.695	Amphiprion_percula
MGP_PahariEiJ_G0026164	Sall4	100	84.722	ENSATEG00000024480	sall4	100	41.553	Anabas_testudineus
MGP_PahariEiJ_G0026164	Sall4	98	87.500	ENSAPLG00000006498	SALL4	100	51.077	Anas_platyrhynchos
MGP_PahariEiJ_G0026164	Sall4	100	87.500	ENSACAG00000012748	SALL4	100	51.715	Anolis_carolinensis
MGP_PahariEiJ_G0026164	Sall4	100	95.833	ENSANAG00000023352	SALL4	100	75.697	Aotus_nancymaae
MGP_PahariEiJ_G0026164	Sall4	100	81.944	ENSACLG00000017851	sall4	100	40.851	Astatotilapia_calliptera
MGP_PahariEiJ_G0026164	Sall4	100	86.111	ENSAMXG00000001254	sall4	99	42.667	Astyanax_mexicanus
MGP_PahariEiJ_G0026164	Sall4	100	91.667	ENSBTAG00000003101	SALL4	100	67.582	Bos_taurus
MGP_PahariEiJ_G0026164	Sall4	100	95.833	ENSCJAG00000000591	SALL4	99	72.779	Callithrix_jacchus
MGP_PahariEiJ_G0026164	Sall4	100	94.444	ENSCAFG00000011738	-	100	71.639	Canis_familiaris
MGP_PahariEiJ_G0026164	Sall4	100	94.444	ENSCAFG00020021870	SALL4	100	71.547	Canis_lupus_dingo
MGP_PahariEiJ_G0026164	Sall4	100	87.500	ENSCHIG00000026270	SALL4	100	67.093	Capra_hircus
MGP_PahariEiJ_G0026164	Sall4	100	97.222	ENSTSYG00000007359	SALL4	100	72.800	Carlito_syrichta
MGP_PahariEiJ_G0026164	Sall4	99	92.958	ENSCAPG00000012135	SALL4	97	70.774	Cavia_aperea
MGP_PahariEiJ_G0026164	Sall4	89	79.268	ENSCPOG00000036300	-	90	79.268	Cavia_porcellus
MGP_PahariEiJ_G0026164	Sall4	99	80.000	ENSCPOG00000038489	-	99	92.857	Cavia_porcellus
MGP_PahariEiJ_G0026164	Sall4	100	94.444	ENSCCAG00000029512	-	100	71.267	Cebus_capucinus
MGP_PahariEiJ_G0026164	Sall4	100	95.833	ENSCATG00000030757	SALL4	100	73.364	Cercocebus_atys
MGP_PahariEiJ_G0026164	Sall4	100	91.667	ENSCLAG00000010479	SALL4	100	71.284	Chinchilla_lanigera
MGP_PahariEiJ_G0026164	Sall4	100	95.833	ENSCSAG00000015269	SALL4	100	73.180	Chlorocebus_sabaeus
MGP_PahariEiJ_G0026164	Sall4	98	87.500	ENSCPBG00000014995	SALL4	100	51.935	Chrysemys_picta_bellii
MGP_PahariEiJ_G0026164	Sall4	100	95.833	ENSCANG00000036463	SALL4	100	72.995	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0026164	Sall4	100	97.222	ENSCGRG00001019569	Sall4	100	80.975	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0026164	Sall4	100	97.222	ENSCGRG00000000462	Sall4	100	88.889	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0026164	Sall4	100	84.722	ENSCSEG00000014604	sall4	100	41.532	Cynoglossus_semilaevis
MGP_PahariEiJ_G0026164	Sall4	100	83.333	ENSCVAG00000010815	sall4	100	41.191	Cyprinodon_variegatus
MGP_PahariEiJ_G0026164	Sall4	100	84.722	ENSDARG00000044485	sall4	99	42.468	Danio_rerio
MGP_PahariEiJ_G0026164	Sall4	100	94.444	ENSDNOG00000040633	SALL4	100	70.929	Dasypus_novemcinctus
MGP_PahariEiJ_G0026164	Sall4	100	90.278	ENSDORG00000012841	Sall4	100	87.640	Dipodomys_ordii
MGP_PahariEiJ_G0026164	Sall4	66	92.857	ENSETEG00000012475	-	64	74.000	Echinops_telfairi
MGP_PahariEiJ_G0026164	Sall4	56	58.824	ENSEBUG00000015425	-	59	69.091	Eptatretus_burgeri
MGP_PahariEiJ_G0026164	Sall4	100	95.833	ENSECAG00000018533	SALL4	100	72.652	Equus_caballus
MGP_PahariEiJ_G0026164	Sall4	100	95.833	ENSEEUG00000003649	SALL4	99	68.975	Erinaceus_europaeus
MGP_PahariEiJ_G0026164	Sall4	100	84.722	ENSELUG00000005696	sall4	100	41.839	Esox_lucius
MGP_PahariEiJ_G0026164	Sall4	100	94.444	ENSFCAG00000002822	SALL4	100	70.496	Felis_catus
MGP_PahariEiJ_G0026164	Sall4	98	90.141	ENSFALG00000013149	SALL4	100	51.460	Ficedula_albicollis
MGP_PahariEiJ_G0026164	Sall4	100	93.056	ENSFDAG00000017812	SALL4	100	70.138	Fukomys_damarensis
MGP_PahariEiJ_G0026164	Sall4	100	86.111	ENSFHEG00000014187	sall4	100	41.852	Fundulus_heteroclitus
MGP_PahariEiJ_G0026164	Sall4	100	84.722	ENSGMOG00000003822	sall4	100	41.910	Gadus_morhua
MGP_PahariEiJ_G0026164	Sall4	98	87.500	ENSGALG00000041365	SALL4	100	51.031	Gallus_gallus
MGP_PahariEiJ_G0026164	Sall4	100	86.111	ENSGAFG00000019925	sall4	100	41.312	Gambusia_affinis
MGP_PahariEiJ_G0026164	Sall4	92	84.722	ENSGACG00000011124	sall4	100	40.306	Gasterosteus_aculeatus
MGP_PahariEiJ_G0026164	Sall4	98	87.500	ENSGAGG00000002297	SALL4	100	51.763	Gopherus_agassizii
MGP_PahariEiJ_G0026164	Sall4	100	95.833	ENSGGOG00000001832	SALL4	100	72.627	Gorilla_gorilla
MGP_PahariEiJ_G0026164	Sall4	100	81.944	ENSHBUG00000007327	sall4	100	40.867	Haplochromis_burtoni
MGP_PahariEiJ_G0026164	Sall4	100	94.444	ENSHGLG00000009043	SALL4	96	71.017	Heterocephalus_glaber_female
MGP_PahariEiJ_G0026164	Sall4	100	94.444	ENSHGLG00100002722	SALL4	96	71.113	Heterocephalus_glaber_male
MGP_PahariEiJ_G0026164	Sall4	100	84.722	ENSHCOG00000008519	sall4	100	41.010	Hippocampus_comes
MGP_PahariEiJ_G0026164	Sall4	100	86.111	ENSIPUG00000019170	sall4	99	41.892	Ictalurus_punctatus
MGP_PahariEiJ_G0026164	Sall4	100	83.969	ENSSTOG00000025002	SALL4	100	94.366	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0026164	Sall4	98	98.611	ENSJJAG00000020688	Sall4	98	98.592	Jaculus_jaculus
MGP_PahariEiJ_G0026164	Sall4	100	84.722	ENSKMAG00000002501	sall4	100	41.582	Kryptolebias_marmoratus
MGP_PahariEiJ_G0026164	Sall4	50	62.687	ENSLBEG00000002594	-	62	58.228	Labrus_bergylta
MGP_PahariEiJ_G0026164	Sall4	100	84.722	ENSLBEG00000019951	sall4	100	41.952	Labrus_bergylta
MGP_PahariEiJ_G0026164	Sall4	99	57.025	ENSLACG00000013898	SALL4	100	58.889	Latimeria_chalumnae
MGP_PahariEiJ_G0026164	Sall4	100	84.722	ENSLOCG00000002427	sall4	100	44.670	Lepisosteus_oculatus
MGP_PahariEiJ_G0026164	Sall4	100	97.222	ENSLAFG00000004309	SALL4	100	72.022	Loxodonta_africana
MGP_PahariEiJ_G0026164	Sall4	100	95.833	ENSMFAG00000027169	SALL4	100	73.364	Macaca_fascicularis
MGP_PahariEiJ_G0026164	Sall4	100	95.833	ENSMMUG00000003870	SALL4	100	75.600	Macaca_mulatta
MGP_PahariEiJ_G0026164	Sall4	100	95.833	ENSMNEG00000035995	SALL4	100	73.449	Macaca_nemestrina
MGP_PahariEiJ_G0026164	Sall4	100	95.833	ENSMLEG00000030467	SALL4	100	73.180	Mandrillus_leucophaeus
MGP_PahariEiJ_G0026164	Sall4	100	84.722	ENSMAMG00000005223	sall4	100	42.052	Mastacembelus_armatus
MGP_PahariEiJ_G0026164	Sall4	100	81.944	ENSMZEG00005023418	sall4	100	40.851	Maylandia_zebra
MGP_PahariEiJ_G0026164	Sall4	98	87.500	ENSMGAG00000009344	SALL4	99	65.385	Meleagris_gallopavo
MGP_PahariEiJ_G0026164	Sall4	100	91.667	ENSMAUG00000015814	Sall4	100	84.733	Mesocricetus_auratus
MGP_PahariEiJ_G0026164	Sall4	100	97.222	ENSMICG00000000027	SALL4	100	73.130	Microcebus_murinus
MGP_PahariEiJ_G0026164	Sall4	100	95.890	ENSMOCG00000018245	Sall4	100	95.890	Microtus_ochrogaster
MGP_PahariEiJ_G0026164	Sall4	100	84.722	ENSMMOG00000014929	sall4	100	40.697	Mola_mola
MGP_PahariEiJ_G0026164	Sall4	100	86.111	ENSMODG00000016387	SALL4	97	55.203	Monodelphis_domestica
MGP_PahariEiJ_G0026164	Sall4	100	86.111	ENSMALG00000018709	sall4	100	41.993	Monopterus_albus
MGP_PahariEiJ_G0026164	Sall4	100	98.611	MGP_CAROLIEiJ_G0024723	Sall4	100	98.611	Mus_caroli
MGP_PahariEiJ_G0026164	Sall4	100	98.611	ENSMUSG00000027547	Sall4	100	98.611	Mus_musculus
MGP_PahariEiJ_G0026164	Sall4	100	98.611	MGP_SPRETEiJ_G0025643	Sall4	100	98.611	Mus_spretus
MGP_PahariEiJ_G0026164	Sall4	98	94.444	ENSMPUG00000017543	SALL4	96	71.009	Mustela_putorius_furo
MGP_PahariEiJ_G0026164	Sall4	98	91.667	ENSMLUG00000007060	-	100	70.345	Myotis_lucifugus
MGP_PahariEiJ_G0026164	Sall4	94	71.212	ENSMLUG00000028073	-	99	50.694	Myotis_lucifugus
MGP_PahariEiJ_G0026164	Sall4	98	88.889	ENSMLUG00000008405	-	100	63.519	Myotis_lucifugus
MGP_PahariEiJ_G0026164	Sall4	100	94.444	ENSNGAG00000017833	Sall4	100	75.646	Nannospalax_galili
MGP_PahariEiJ_G0026164	Sall4	97	81.944	ENSNBRG00000001829	sall4	100	40.763	Neolamprologus_brichardi
MGP_PahariEiJ_G0026164	Sall4	100	95.833	ENSNLEG00000007013	SALL4	100	73.088	Nomascus_leucogenys
MGP_PahariEiJ_G0026164	Sall4	100	86.111	ENSMEUG00000005793	-	99	61.538	Notamacropus_eugenii
MGP_PahariEiJ_G0026164	Sall4	100	95.833	ENSOPRG00000011640	SALL4	100	69.936	Ochotona_princeps
MGP_PahariEiJ_G0026164	Sall4	100	81.944	ENSONIG00000016557	sall4	100	41.156	Oreochromis_niloticus
MGP_PahariEiJ_G0026164	Sall4	100	88.889	ENSOANG00000008667	SALL4	97	55.788	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0026164	Sall4	99	94.366	ENSOCUG00000011797	SALL4	100	70.869	Oryctolagus_cuniculus
MGP_PahariEiJ_G0026164	Sall4	99	86.111	ENSORLG00000016130	sall4	61	59.615	Oryzias_latipes
MGP_PahariEiJ_G0026164	Sall4	99	86.111	ENSORLG00020007339	sall4	61	59.615	Oryzias_latipes_hni
MGP_PahariEiJ_G0026164	Sall4	99	86.111	ENSORLG00015002265	sall4	61	59.615	Oryzias_latipes_hsok
MGP_PahariEiJ_G0026164	Sall4	99	86.111	ENSOMEG00000017344	sall4	100	41.314	Oryzias_melastigma
MGP_PahariEiJ_G0026164	Sall4	100	95.833	ENSOGAG00000013799	SALL4	99	71.920	Otolemur_garnettii
MGP_PahariEiJ_G0026164	Sall4	100	84.722	ENSOARG00000014570	SALL4	100	62.960	Ovis_aries
MGP_PahariEiJ_G0026164	Sall4	100	95.833	ENSPPAG00000038064	SALL4	100	72.903	Pan_paniscus
MGP_PahariEiJ_G0026164	Sall4	100	95.833	ENSPPRG00000008677	SALL4	100	70.129	Panthera_pardus
MGP_PahariEiJ_G0026164	Sall4	100	95.833	ENSPTRG00000013631	SALL4	100	72.811	Pan_troglodytes
MGP_PahariEiJ_G0026164	Sall4	100	95.833	ENSPANG00000021792	SALL4	100	73.449	Papio_anubis
MGP_PahariEiJ_G0026164	Sall4	93	87.324	ENSPKIG00000007074	sall4	100	43.126	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0026164	Sall4	98	87.500	ENSPSIG00000009066	SALL4	100	51.029	Pelodiscus_sinensis
MGP_PahariEiJ_G0026164	Sall4	100	83.333	ENSPMGG00000022551	sall4	100	40.969	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0026164	Sall4	100	98.611	ENSPEMG00000022706	Sall4	100	98.611	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0026164	Sall4	100	87.500	ENSPCIG00000022838	SALL4	97	53.581	Phascolarctos_cinereus
MGP_PahariEiJ_G0026164	Sall4	100	86.111	ENSPFOG00000001442	sall4	100	40.967	Poecilia_formosa
MGP_PahariEiJ_G0026164	Sall4	100	86.111	ENSPLAG00000008760	sall4	100	40.882	Poecilia_latipinna
MGP_PahariEiJ_G0026164	Sall4	100	86.111	ENSPMEG00000008497	sall4	100	40.847	Poecilia_mexicana
MGP_PahariEiJ_G0026164	Sall4	99	85.915	ENSPREG00000021140	sall4	100	41.511	Poecilia_reticulata
MGP_PahariEiJ_G0026164	Sall4	100	94.444	ENSPPYG00000011138	SALL4	100	72.535	Pongo_abelii
MGP_PahariEiJ_G0026164	Sall4	100	94.444	ENSPCAG00000004726	SALL4	99	66.851	Procavia_capensis
MGP_PahariEiJ_G0026164	Sall4	100	95.833	ENSPCOG00000016321	SALL4	100	72.811	Propithecus_coquereli
MGP_PahariEiJ_G0026164	Sall4	98	90.278	ENSPVAG00000002075	SALL4	94	70.829	Pteropus_vampyrus
MGP_PahariEiJ_G0026164	Sall4	100	81.944	ENSPNYG00000021738	sall4	100	40.716	Pundamilia_nyererei
MGP_PahariEiJ_G0026164	Sall4	100	87.500	ENSPNAG00000020929	sall4	99	41.922	Pygocentrus_nattereri
MGP_PahariEiJ_G0026164	Sall4	100	98.611	ENSRNOG00000050035	Sall4	100	87.251	Rattus_norvegicus
MGP_PahariEiJ_G0026164	Sall4	100	95.833	ENSRBIG00000039876	SALL4	100	73.042	Rhinopithecus_bieti
MGP_PahariEiJ_G0026164	Sall4	100	95.833	ENSRROG00000036585	SALL4	100	72.903	Rhinopithecus_roxellana
MGP_PahariEiJ_G0026164	Sall4	100	95.833	ENSSBOG00000030011	SALL4	100	72.350	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0026164	Sall4	100	86.111	ENSSHAG00000018013	SALL4	88	62.019	Sarcophilus_harrisii
MGP_PahariEiJ_G0026164	Sall4	93	84.722	ENSSFOG00015021075	sall4	100	43.255	Scleropages_formosus
MGP_PahariEiJ_G0026164	Sall4	100	84.722	ENSSMAG00000019218	sall4	99	41.709	Scophthalmus_maximus
MGP_PahariEiJ_G0026164	Sall4	100	84.722	ENSSDUG00000004657	sall4	100	41.052	Seriola_dumerili
MGP_PahariEiJ_G0026164	Sall4	100	84.722	ENSSLDG00000004973	sall4	100	41.575	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0026164	Sall4	100	84.722	ENSSPAG00000001978	sall4	100	41.709	Stegastes_partitus
MGP_PahariEiJ_G0026164	Sall4	98	94.444	ENSSSCG00000007479	SALL4	100	71.232	Sus_scrofa
MGP_PahariEiJ_G0026164	Sall4	87	55.939	ENSTGUG00000018244	-	99	50.993	Taeniopygia_guttata
MGP_PahariEiJ_G0026164	Sall4	100	84.722	ENSTRUG00000007410	sall4	100	42.367	Takifugu_rubripes
MGP_PahariEiJ_G0026164	Sall4	100	84.722	ENSTNIG00000012460	sall4	100	41.688	Tetraodon_nigroviridis
MGP_PahariEiJ_G0026164	Sall4	50	62.687	ENSTNIG00000013008	-	54	55.357	Tetraodon_nigroviridis
MGP_PahariEiJ_G0026164	Sall4	100	95.833	ENSTTRG00000007753	SALL4	99	68.624	Tursiops_truncatus
MGP_PahariEiJ_G0026164	Sall4	100	95.833	ENSUAMG00000010113	SALL4	100	71.599	Ursus_americanus
MGP_PahariEiJ_G0026164	Sall4	100	95.833	ENSUMAG00000024274	SALL4	99	71.238	Ursus_maritimus
MGP_PahariEiJ_G0026164	Sall4	98	85.915	ENSXETG00000012326	sall4	100	45.415	Xenopus_tropicalis
MGP_PahariEiJ_G0026164	Sall4	100	86.111	ENSXCOG00000015467	sall4	100	39.180	Xiphophorus_couchianus
MGP_PahariEiJ_G0026164	Sall4	100	86.111	ENSXMAG00000012692	sall4	100	39.529	Xiphophorus_maculatus