EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0026189 (Gene tree)
Gene ID: 110319384
Gene Symbol: -
Alias: -
Full Name: Z-DNA binding protein 1
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 11158 bases
Position: chr3:155500983-155512140
Accession: 110319384
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0067466	z-alpha	PF02295.17	7.4e-13	1	2
MGP_PahariEiJ_P0067466	z-alpha	PF02295.17	7.4e-13	2	2
MGP_PahariEiJ_P0067464	z-alpha	PF02295.17	3.8e-12	1	2
MGP_PahariEiJ_P0067464	z-alpha	PF02295.17	3.8e-12	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0067464	-	1804	-	MGP_PahariEiJ_P0067464	333 (aa)	-	-
MGP_PahariEiJ_T0067465	-	3096	-	-	- (aa)	-	-
MGP_PahariEiJ_T0067466	-	772	XM_021194877	MGP_PahariEiJ_P0067466	187 (aa)	XP_021050536	UPI000A30F586

Gene Model

Click here to download MGP_PahariEiJ_G0026189's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0026189's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0026189	-	85	47.712	ENSG00000124256	ZBP1	90	50.649	Homo_sapiens
MGP_PahariEiJ_G0026189	-	85	45.016	ENSAMEG00000012704	-	78	45.016	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0026189	-	85	47.213	ENSANAG00000038003	ZBP1	90	48.261	Aotus_nancymaae
MGP_PahariEiJ_G0026189	-	85	47.213	ENSCJAG00000019094	ZBP1	70	47.213	Callithrix_jacchus
MGP_PahariEiJ_G0026189	-	80	46.243	ENSCAFG00000023783	ZBP1	53	47.303	Canis_familiaris
MGP_PahariEiJ_G0026189	-	85	45.724	ENSCAFG00020022005	ZBP1	67	45.724	Canis_lupus_dingo
MGP_PahariEiJ_G0026189	-	85	45.395	ENSCHIG00000006747	-	69	45.395	Capra_hircus
MGP_PahariEiJ_G0026189	-	82	47.701	ENSCPOG00000008569	ZBP1	70	44.518	Cavia_porcellus
MGP_PahariEiJ_G0026189	-	85	46.885	ENSCCAG00000009469	ZBP1	70	46.885	Cebus_capucinus
MGP_PahariEiJ_G0026189	-	85	49.020	ENSCATG00000013143	ZBP1	71	49.020	Cercocebus_atys
MGP_PahariEiJ_G0026189	-	85	46.078	ENSCLAG00000012154	ZBP1	70	46.078	Chinchilla_lanigera
MGP_PahariEiJ_G0026189	-	85	48.039	ENSCANG00000035951	ZBP1	70	48.366	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0026189	-	83	71.154	ENSCGRG00001015544	Zbp1	70	67.368	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0026189	-	83	71.154	ENSCGRG00000002294	Zbp1	69	66.783	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0026189	-	80	46.875	ENSDNOG00000002438	-	63	46.875	Dasypus_novemcinctus
MGP_PahariEiJ_G0026189	-	85	43.648	ENSEASG00005023257	ZBP1	71	43.648	Equus_asinus_asinus
MGP_PahariEiJ_G0026189	-	85	43.648	ENSECAG00000017185	ZBP1	71	43.648	Equus_caballus
MGP_PahariEiJ_G0026189	-	86	47.059	ENSEEUG00000002058	-	86	47.059	Erinaceus_europaeus
MGP_PahariEiJ_G0026189	-	78	49.686	ENSFCAG00000000420	-	94	50.926	Felis_catus
MGP_PahariEiJ_G0026189	-	51	34.831	ENSGAGG00000001140	-	67	34.831	Gopherus_agassizii
MGP_PahariEiJ_G0026189	-	85	47.712	ENSGGOG00000011001	ZBP1	70	47.712	Gorilla_gorilla
MGP_PahariEiJ_G0026189	-	85	49.346	ENSMFAG00000030920	ZBP1	71	49.346	Macaca_fascicularis
MGP_PahariEiJ_G0026189	-	85	49.346	ENSMMUG00000022588	ZBP1	71	49.346	Macaca_mulatta
MGP_PahariEiJ_G0026189	-	85	49.346	ENSMNEG00000043957	ZBP1	71	49.346	Macaca_nemestrina
MGP_PahariEiJ_G0026189	-	85	51.220	ENSMLEG00000031509	ZBP1	68	51.220	Mandrillus_leucophaeus
MGP_PahariEiJ_G0026189	-	97	65.000	ENSMAUG00000001095	Zbp1	81	65.000	Mesocricetus_auratus
MGP_PahariEiJ_G0026189	-	98	39.237	ENSMICG00000046613	ZBP1	84	39.510	Microcebus_murinus
MGP_PahariEiJ_G0026189	-	81	68.212	ENSMOCG00000019061	Zbp1	68	64.211	Microtus_ochrogaster
MGP_PahariEiJ_G0026189	-	100	90.374	MGP_CAROLIEiJ_G0024748	Zbp1	100	90.374	Mus_caroli
MGP_PahariEiJ_G0026189	-	100	88.770	ENSMUSG00000027514	Zbp1	100	88.770	Mus_musculus
MGP_PahariEiJ_G0026189	-	100	88.770	MGP_SPRETEiJ_G0025668	Zbp1	100	88.770	Mus_spretus
MGP_PahariEiJ_G0026189	-	83	45.302	ENSMPUG00000006670	-	65	45.302	Mustela_putorius_furo
MGP_PahariEiJ_G0026189	-	75	41.718	ENSMLUG00000017020	-	51	42.534	Myotis_lucifugus
MGP_PahariEiJ_G0026189	-	95	54.599	ENSNGAG00000023407	Zbp1	81	54.599	Nannospalax_galili
MGP_PahariEiJ_G0026189	-	85	47.386	ENSNLEG00000007069	ZBP1	70	47.386	Nomascus_leucogenys
MGP_PahariEiJ_G0026189	-	81	48.276	ENSOGAG00000014671	ZBP1	74	43.831	Otolemur_garnettii
MGP_PahariEiJ_G0026189	-	85	45.066	ENSOARG00000017418	-	67	45.066	Ovis_aries
MGP_PahariEiJ_G0026189	-	85	47.712	ENSPPAG00000037949	ZBP1	70	47.712	Pan_paniscus
MGP_PahariEiJ_G0026189	-	78	47.826	ENSPPRG00000011275	-	95	49.115	Panthera_pardus
MGP_PahariEiJ_G0026189	-	78	47.904	ENSPTIG00000011495	-	95	49.138	Panthera_tigris_altaica
MGP_PahariEiJ_G0026189	-	85	47.712	ENSPTRG00000013665	ZBP1	74	47.712	Pan_troglodytes
MGP_PahariEiJ_G0026189	-	85	49.346	ENSPANG00000023211	ZBP1	71	49.346	Papio_anubis
MGP_PahariEiJ_G0026189	-	89	59.649	ENSPEMG00000016060	Zbp1	98	59.649	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0026189	-	85	47.386	ENSPPYG00000011165	ZBP1	70	47.386	Pongo_abelii
MGP_PahariEiJ_G0026189	-	96	40.171	ENSPCOG00000027415	ZBP1	82	40.171	Propithecus_coquereli
MGP_PahariEiJ_G0026189	-	80	45.562	ENSPVAG00000014691	-	78	46.959	Pteropus_vampyrus
MGP_PahariEiJ_G0026189	-	81	75.325	ENSRNOG00000006314	Zbp1	70	72.474	Rattus_norvegicus
MGP_PahariEiJ_G0026189	-	85	46.405	ENSRBIG00000044740	ZBP1	70	46.405	Rhinopithecus_bieti
MGP_PahariEiJ_G0026189	-	85	46.405	ENSRROG00000038526	ZBP1	70	46.405	Rhinopithecus_roxellana
MGP_PahariEiJ_G0026189	-	85	48.525	ENSSBOG00000032730	ZBP1	95	50.435	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0026189	-	88	46.203	ENSTBEG00000006578	ZBP1	85	46.203	Tupaia_belangeri
MGP_PahariEiJ_G0026189	-	85	44.737	ENSTTRG00000000687	-	83	44.737	Tursiops_truncatus
MGP_PahariEiJ_G0026189	-	81	54.194	ENSUAMG00000019777	ZBP1	64	49.310	Ursus_americanus
MGP_PahariEiJ_G0026189	-	85	45.161	ENSUMAG00000002600	ZBP1	67	45.161	Ursus_maritimus
MGP_PahariEiJ_G0026189	-	85	44.079	ENSVVUG00000017189	-	63	47.331	Vulpes_vulpes