EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0026254 (Gene tree)
Gene ID: 110317656
Gene Symbol: Zgpat
Alias: -
Full Name: zinc finger CCCH-type and G-patch domain containing
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 20260 bases
Position: chr3:163645510-163665769
Accession: 110317656
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0067757	G-patch	PF01585.23	9.2e-12	1	1
MGP_PahariEiJ_P0067758	G-patch	PF01585.23	9.2e-12	1	1
MGP_PahariEiJ_P0067762	G-patch	PF01585.23	1.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0067762	-	793	-	MGP_PahariEiJ_P0067762	184 (aa)	-	-
MGP_PahariEiJ_T0067761	-	679	-	-	- (aa)	-	-
MGP_PahariEiJ_T0067760	-	4899	-	-	- (aa)	-	-
MGP_PahariEiJ_T0067758	-	2044	XM_021192250	MGP_PahariEiJ_P0067758	513 (aa)	XP_021047909	UPI000A306F12
MGP_PahariEiJ_T0067759	-	3649	-	MGP_PahariEiJ_P0067759	513 (aa)	-	UPI000A306F12
MGP_PahariEiJ_T0067757	-	2268	XM_021192251	MGP_PahariEiJ_P0067757	513 (aa)	XP_021047910	UPI000A306F12

Gene Model

Click here to download MGP_PahariEiJ_G0026254's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0026254's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0026254	Zgpat	100	79.612	ENSG00000197114	ZGPAT	100	79.029	Homo_sapiens
MGP_PahariEiJ_G0026254	Zgpat	100	51.154	ENSAPOG00000001732	zgpat	100	49.536	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0026254	Zgpat	100	78.058	ENSAMEG00000001752	-	100	78.058	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0026254	Zgpat	100	50.095	ENSACIG00000015939	zgpat	100	49.451	Amphilophus_citrinellus
MGP_PahariEiJ_G0026254	Zgpat	100	50.951	ENSAOCG00000014437	zgpat	100	51.412	Amphiprion_ocellaris
MGP_PahariEiJ_G0026254	Zgpat	100	51.141	ENSAPEG00000006555	zgpat	100	51.601	Amphiprion_percula
MGP_PahariEiJ_G0026254	Zgpat	100	50.746	ENSATEG00000003346	zgpat	100	50.746	Anabas_testudineus
MGP_PahariEiJ_G0026254	Zgpat	100	63.671	ENSAPLG00000014707	-	100	63.671	Anas_platyrhynchos
MGP_PahariEiJ_G0026254	Zgpat	91	58.367	ENSACAG00000012278	-	100	58.871	Anolis_carolinensis
MGP_PahariEiJ_G0026254	Zgpat	100	79.922	ENSANAG00000035708	ZGPAT	100	79.532	Aotus_nancymaae
MGP_PahariEiJ_G0026254	Zgpat	100	51.311	ENSACLG00000013778	zgpat	100	50.649	Astatotilapia_calliptera
MGP_PahariEiJ_G0026254	Zgpat	100	48.224	ENSAMXG00000018583	zgpat	100	49.353	Astyanax_mexicanus
MGP_PahariEiJ_G0026254	Zgpat	100	76.998	ENSBTAG00000007498	ZGPAT	100	76.998	Bos_taurus
MGP_PahariEiJ_G0026254	Zgpat	100	78.530	ENSCJAG00000010398	ZGPAT	100	78.530	Callithrix_jacchus
MGP_PahariEiJ_G0026254	Zgpat	99	73.359	ENSCAFG00000013056	ZGPAT	99	73.166	Canis_familiaris
MGP_PahariEiJ_G0026254	Zgpat	100	73.796	ENSCAFG00020001956	-	100	73.218	Canis_lupus_dingo
MGP_PahariEiJ_G0026254	Zgpat	100	76.803	ENSCHIG00000026209	-	100	76.803	Capra_hircus
MGP_PahariEiJ_G0026254	Zgpat	96	76.104	ENSTSYG00000000795	ZGPAT	97	75.703	Carlito_syrichta
MGP_PahariEiJ_G0026254	Zgpat	84	80.645	ENSCAPG00000009466	-	100	70.126	Cavia_aperea
MGP_PahariEiJ_G0026254	Zgpat	100	80.934	ENSCPOG00000014427	ZGPAT	100	80.934	Cavia_porcellus
MGP_PahariEiJ_G0026254	Zgpat	100	79.727	ENSCCAG00000035441	ZGPAT	100	79.337	Cebus_capucinus
MGP_PahariEiJ_G0026254	Zgpat	100	79.572	ENSCATG00000034076	ZGPAT	100	79.183	Cercocebus_atys
MGP_PahariEiJ_G0026254	Zgpat	100	83.658	ENSCLAG00000004087	ZGPAT	100	83.463	Chinchilla_lanigera
MGP_PahariEiJ_G0026254	Zgpat	100	77.154	ENSCSAG00000016628	ZGPAT	100	76.592	Chlorocebus_sabaeus
MGP_PahariEiJ_G0026254	Zgpat	73	65.185	ENSCHOG00000013646	-	84	60.766	Choloepus_hoffmanni
MGP_PahariEiJ_G0026254	Zgpat	100	61.869	ENSCPBG00000014736	-	99	62.127	Chrysemys_picta_bellii
MGP_PahariEiJ_G0026254	Zgpat	100	80.350	ENSCANG00000041082	ZGPAT	100	79.767	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0026254	Zgpat	100	91.618	ENSCGRG00001011442	Zgpat	100	91.033	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0026254	Zgpat	100	82.651	ENSCGRG00000014321	Zgpat	100	82.066	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0026254	Zgpat	100	49.254	ENSCSEG00000002301	zgpat	100	49.440	Cynoglossus_semilaevis
MGP_PahariEiJ_G0026254	Zgpat	100	48.885	ENSCVAG00000007255	zgpat	100	48.457	Cyprinodon_variegatus
MGP_PahariEiJ_G0026254	Zgpat	100	48.743	ENSDARG00000027403	zgpat	100	48.295	Danio_rerio
MGP_PahariEiJ_G0026254	Zgpat	100	75.534	ENSDNOG00000025874	-	100	75.728	Dasypus_novemcinctus
MGP_PahariEiJ_G0026254	Zgpat	96	80.612	ENSDORG00000001360	Zgpat	100	79.592	Dipodomys_ordii
MGP_PahariEiJ_G0026254	Zgpat	93	39.286	ENSEBUG00000009006	ZGPAT	99	38.346	Eptatretus_burgeri
MGP_PahariEiJ_G0026254	Zgpat	100	65.185	ENSEASG00005023159	-	100	68.381	Equus_asinus_asinus
MGP_PahariEiJ_G0026254	Zgpat	100	67.486	ENSECAG00000019674	-	100	70.817	Equus_caballus
MGP_PahariEiJ_G0026254	Zgpat	100	48.794	ENSELUG00000003733	zgpat	100	48.794	Esox_lucius
MGP_PahariEiJ_G0026254	Zgpat	100	77.043	ENSFCAG00000001173	-	100	78.016	Felis_catus
MGP_PahariEiJ_G0026254	Zgpat	100	63.100	ENSFALG00000005924	-	100	63.469	Ficedula_albicollis
MGP_PahariEiJ_G0026254	Zgpat	100	80.154	ENSFDAG00000002974	ZGPAT	100	80.545	Fukomys_damarensis
MGP_PahariEiJ_G0026254	Zgpat	100	50.940	ENSFHEG00000009966	zgpat	100	51.128	Fundulus_heteroclitus
MGP_PahariEiJ_G0026254	Zgpat	100	61.510	ENSGALG00000006092	-	100	61.510	Gallus_gallus
MGP_PahariEiJ_G0026254	Zgpat	100	48.598	ENSGAFG00000020149	zgpat	100	49.440	Gambusia_affinis
MGP_PahariEiJ_G0026254	Zgpat	100	48.776	ENSGACG00000004662	zgpat	100	47.802	Gasterosteus_aculeatus
MGP_PahariEiJ_G0026254	Zgpat	100	60.482	ENSGAGG00000019510	-	99	61.993	Gopherus_agassizii
MGP_PahariEiJ_G0026254	Zgpat	100	76.262	ENSGGOG00000004801	ZGPAT	100	75.701	Gorilla_gorilla
MGP_PahariEiJ_G0026254	Zgpat	100	51.311	ENSHBUG00000010362	zgpat	100	50.649	Haplochromis_burtoni
MGP_PahariEiJ_G0026254	Zgpat	100	80.381	ENSHGLG00000014870	ZGPAT	100	80.000	Heterocephalus_glaber_female
MGP_PahariEiJ_G0026254	Zgpat	100	82.879	ENSHGLG00100003927	ZGPAT	100	82.490	Heterocephalus_glaber_male
MGP_PahariEiJ_G0026254	Zgpat	100	50.382	ENSHCOG00000004674	zgpat	100	51.412	Hippocampus_comes
MGP_PahariEiJ_G0026254	Zgpat	100	49.716	ENSIPUG00000012890	zgpat	100	48.519	Ictalurus_punctatus
MGP_PahariEiJ_G0026254	Zgpat	95	77.505	ENSSTOG00000011986	ZGPAT	100	76.892	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0026254	Zgpat	100	76.023	ENSJJAG00000008007	-	100	75.049	Jaculus_jaculus
MGP_PahariEiJ_G0026254	Zgpat	100	84.405	ENSJJAG00000018714	-	100	83.431	Jaculus_jaculus
MGP_PahariEiJ_G0026254	Zgpat	100	48.609	ENSKMAG00000006523	zgpat	100	50.185	Kryptolebias_marmoratus
MGP_PahariEiJ_G0026254	Zgpat	100	48.868	ENSLBEG00000016259	zgpat	100	50.654	Labrus_bergylta
MGP_PahariEiJ_G0026254	Zgpat	100	56.827	ENSLACG00000002661	zgpat	100	57.248	Latimeria_chalumnae
MGP_PahariEiJ_G0026254	Zgpat	100	55.639	ENSLOCG00000001659	zgpat	100	55.639	Lepisosteus_oculatus
MGP_PahariEiJ_G0026254	Zgpat	100	79.961	ENSMFAG00000001467	ZGPAT	100	79.377	Macaca_fascicularis
MGP_PahariEiJ_G0026254	Zgpat	100	79.767	ENSMMUG00000000171	ZGPAT	100	79.183	Macaca_mulatta
MGP_PahariEiJ_G0026254	Zgpat	100	79.767	ENSMNEG00000019568	ZGPAT	100	79.183	Macaca_nemestrina
MGP_PahariEiJ_G0026254	Zgpat	100	79.961	ENSMLEG00000035416	ZGPAT	100	79.377	Mandrillus_leucophaeus
MGP_PahariEiJ_G0026254	Zgpat	100	49.254	ENSMAMG00000008266	zgpat	100	49.536	Mastacembelus_armatus
MGP_PahariEiJ_G0026254	Zgpat	100	51.316	ENSMZEG00005021620	zgpat	100	50.652	Maylandia_zebra
MGP_PahariEiJ_G0026254	Zgpat	100	59.892	ENSMGAG00000006823	-	100	59.820	Meleagris_gallopavo
MGP_PahariEiJ_G0026254	Zgpat	100	90.838	ENSMAUG00000017248	Zgpat	100	90.253	Mesocricetus_auratus
MGP_PahariEiJ_G0026254	Zgpat	100	81.128	ENSMICG00000033269	ZGPAT	100	80.934	Microcebus_murinus
MGP_PahariEiJ_G0026254	Zgpat	100	91.033	ENSMOCG00000001324	Zgpat	100	90.448	Microtus_ochrogaster
MGP_PahariEiJ_G0026254	Zgpat	100	50.185	ENSMMOG00000014951	zgpat	100	50.923	Mola_mola
MGP_PahariEiJ_G0026254	Zgpat	92	64.826	ENSMODG00000017016	-	88	65.217	Monodelphis_domestica
MGP_PahariEiJ_G0026254	Zgpat	100	47.368	ENSMALG00000006584	zgpat	100	48.496	Monopterus_albus
MGP_PahariEiJ_G0026254	Zgpat	100	97.826	MGP_CAROLIEiJ_G0024806	Zgpat	100	97.826	Mus_caroli
MGP_PahariEiJ_G0026254	Zgpat	100	97.826	ENSMUSG00000027582	Zgpat	100	97.661	Mus_musculus
MGP_PahariEiJ_G0026254	Zgpat	100	97.283	MGP_SPRETEiJ_G0025732	Zgpat	100	97.283	Mus_spretus
MGP_PahariEiJ_G0026254	Zgpat	100	74.115	ENSMLUG00000005264	-	100	74.115	Myotis_lucifugus
MGP_PahariEiJ_G0026254	Zgpat	79	86.897	ENSNGAG00000014626	-	100	87.234	Nannospalax_galili
MGP_PahariEiJ_G0026254	Zgpat	100	49.906	ENSNBRG00000021521	zgpat	100	48.885	Neolamprologus_brichardi
MGP_PahariEiJ_G0026254	Zgpat	100	76.415	ENSNLEG00000010146	ZGPAT	100	76.038	Nomascus_leucogenys
MGP_PahariEiJ_G0026254	Zgpat	86	56.512	ENSMEUG00000011946	-	100	56.637	Notamacropus_eugenii
MGP_PahariEiJ_G0026254	Zgpat	83	71.053	ENSOPRG00000002115	-	100	73.994	Ochotona_princeps
MGP_PahariEiJ_G0026254	Zgpat	100	81.323	ENSODEG00000006562	ZGPAT	100	80.545	Octodon_degus
MGP_PahariEiJ_G0026254	Zgpat	100	51.124	ENSONIG00000009365	zgpat	100	51.667	Oreochromis_niloticus
MGP_PahariEiJ_G0026254	Zgpat	100	66.419	ENSOANG00000004932	-	100	68.182	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0026254	Zgpat	84	73.377	ENSOCUG00000008687	-	100	74.260	Oryctolagus_cuniculus
MGP_PahariEiJ_G0026254	Zgpat	100	50.276	ENSORLG00000000880	zgpat	100	52.444	Oryzias_latipes
MGP_PahariEiJ_G0026254	Zgpat	100	52.068	ENSORLG00020004339	zgpat	100	53.008	Oryzias_latipes_hni
MGP_PahariEiJ_G0026254	Zgpat	100	51.692	ENSORLG00015018532	zgpat	100	53.008	Oryzias_latipes_hsok
MGP_PahariEiJ_G0026254	Zgpat	100	52.874	ENSOMEG00000014655	zgpat	100	52.874	Oryzias_melastigma
MGP_PahariEiJ_G0026254	Zgpat	100	77.413	ENSOGAG00000034509	ZGPAT	100	77.413	Otolemur_garnettii
MGP_PahariEiJ_G0026254	Zgpat	100	70.956	ENSOARG00000010128	ZGPAT	100	70.956	Ovis_aries
MGP_PahariEiJ_G0026254	Zgpat	100	78.101	ENSPPAG00000027831	ZGPAT	100	77.519	Pan_paniscus
MGP_PahariEiJ_G0026254	Zgpat	100	78.210	ENSPPRG00000024151	-	100	78.210	Panthera_pardus
MGP_PahariEiJ_G0026254	Zgpat	100	78.210	ENSPTIG00000020325	-	100	78.210	Panthera_tigris_altaica
MGP_PahariEiJ_G0026254	Zgpat	100	78.295	ENSPTRG00000013750	ZGPAT	100	77.713	Pan_troglodytes
MGP_PahariEiJ_G0026254	Zgpat	100	77.213	ENSPANG00000005904	ZGPAT	100	76.648	Papio_anubis
MGP_PahariEiJ_G0026254	Zgpat	100	50.926	ENSPKIG00000012056	zgpat	100	51.296	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0026254	Zgpat	100	62.127	ENSPSIG00000015801	-	100	62.313	Pelodiscus_sinensis
MGP_PahariEiJ_G0026254	Zgpat	100	48.780	ENSPMGG00000014856	zgpat	100	48.968	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0026254	Zgpat	100	90.253	ENSPEMG00000015676	Zgpat	100	89.669	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0026254	Zgpat	100	65.028	ENSPCIG00000017922	-	100	65.267	Phascolarctos_cinereus
MGP_PahariEiJ_G0026254	Zgpat	100	50.851	ENSPFOG00000010326	zgpat	100	51.583	Poecilia_formosa
MGP_PahariEiJ_G0026254	Zgpat	100	51.032	ENSPLAG00000002135	zgpat	100	51.985	Poecilia_latipinna
MGP_PahariEiJ_G0026254	Zgpat	100	50.562	ENSPMEG00000019064	zgpat	100	51.583	Poecilia_mexicana
MGP_PahariEiJ_G0026254	Zgpat	100	50.281	ENSPREG00000010919	zgpat	100	50.752	Poecilia_reticulata
MGP_PahariEiJ_G0026254	Zgpat	100	78.641	ENSPPYG00000011246	ZGPAT	100	78.058	Pongo_abelii
MGP_PahariEiJ_G0026254	Zgpat	70	68.493	ENSPCAG00000001883	-	99	68.493	Procavia_capensis
MGP_PahariEiJ_G0026254	Zgpat	100	80.464	ENSPCOG00000012369	ZGPAT	100	80.464	Propithecus_coquereli
MGP_PahariEiJ_G0026254	Zgpat	100	69.246	ENSPVAG00000013489	-	100	69.052	Pteropus_vampyrus
MGP_PahariEiJ_G0026254	Zgpat	100	51.321	ENSPNYG00000013216	zgpat	100	51.028	Pundamilia_nyererei
MGP_PahariEiJ_G0026254	Zgpat	100	49.614	ENSPNAG00000012769	zgpat	100	48.405	Pygocentrus_nattereri
MGP_PahariEiJ_G0026254	Zgpat	100	93.372	ENSRNOG00000014235	Zgpat	100	92.788	Rattus_norvegicus
MGP_PahariEiJ_G0026254	Zgpat	100	80.117	ENSRBIG00000034134	ZGPAT	100	79.532	Rhinopithecus_bieti
MGP_PahariEiJ_G0026254	Zgpat	100	80.350	ENSRROG00000039084	ZGPAT	100	79.767	Rhinopithecus_roxellana
MGP_PahariEiJ_G0026254	Zgpat	100	78.947	ENSSBOG00000028752	ZGPAT	100	78.947	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0026254	Zgpat	100	64.839	ENSSHAG00000017828	-	100	65.275	Sarcophilus_harrisii
MGP_PahariEiJ_G0026254	Zgpat	100	49.635	ENSSFOG00015000739	zgpat	100	49.449	Scleropages_formosus
MGP_PahariEiJ_G0026254	Zgpat	100	46.904	ENSSMAG00000006646	zgpat	100	47.858	Scophthalmus_maximus
MGP_PahariEiJ_G0026254	Zgpat	100	49.725	ENSSDUG00000014684	zgpat	100	50.092	Seriola_dumerili
MGP_PahariEiJ_G0026254	Zgpat	100	49.267	ENSSLDG00000019446	zgpat	100	50.182	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0026254	Zgpat	100	61.624	ENSSPUG00000018516	-	100	61.496	Sphenodon_punctatus
MGP_PahariEiJ_G0026254	Zgpat	100	50.844	ENSSPAG00000022473	zgpat	100	52.336	Stegastes_partitus
MGP_PahariEiJ_G0026254	Zgpat	100	77.821	ENSSSCG00000036595	-	100	78.016	Sus_scrofa
MGP_PahariEiJ_G0026254	Zgpat	100	66.095	ENSTGUG00000007115	-	100	66.286	Taeniopygia_guttata
MGP_PahariEiJ_G0026254	Zgpat	100	51.119	ENSTRUG00000010488	zgpat	100	51.119	Takifugu_rubripes
MGP_PahariEiJ_G0026254	Zgpat	100	51.248	ENSTNIG00000004165	zgpat	100	51.908	Tetraodon_nigroviridis
MGP_PahariEiJ_G0026254	Zgpat	71	80.874	ENSTTRG00000012223	-	71	80.055	Tursiops_truncatus
MGP_PahariEiJ_G0026254	Zgpat	100	78.599	ENSUAMG00000009298	-	100	78.599	Ursus_americanus
MGP_PahariEiJ_G0026254	Zgpat	100	77.821	ENSUMAG00000022033	-	100	77.432	Ursus_maritimus
MGP_PahariEiJ_G0026254	Zgpat	100	72.816	ENSVVUG00000015014	-	100	72.179	Vulpes_vulpes
MGP_PahariEiJ_G0026254	Zgpat	84	53.459	ENSXETG00000026151	zgpat	100	53.398	Xenopus_tropicalis
MGP_PahariEiJ_G0026254	Zgpat	100	51.215	ENSXMAG00000004759	zgpat	100	51.789	Xiphophorus_maculatus