EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0026310 (Gene tree)
Gene ID: 110320929
Gene Symbol: Ythdf3
Alias: 9130022A11Rik
Full Name: YTH N6-methyladenosine RNA binding protein 3
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 34997 bases
Position: chr4:12270125-12305121
Accession: 110320929
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0067981	YTH	PF04146.15	5e-40	1	1
MGP_PahariEiJ_P0067983	YTH	PF04146.15	5.1e-40	1	1
MGP_PahariEiJ_P0067984	YTH	PF04146.15	5.1e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0067983	-	3184	-	MGP_PahariEiJ_P0067983	588 (aa)	-	UPI000A30F41A
MGP_PahariEiJ_T0067982	-	710	-	-	- (aa)	-	-
MGP_PahariEiJ_T0067981	-	5091	XM_021196992	MGP_PahariEiJ_P0067981	585 (aa)	XP_021052651	UPI000A30BE17
MGP_PahariEiJ_T0067985	-	213	-	MGP_PahariEiJ_P0067985	70 (aa)	-	-
MGP_PahariEiJ_T0067984	-	4917	XM_021196991	MGP_PahariEiJ_P0067984	596 (aa)	XP_021052650	UPI000A309B46

Gene Model

Click here to download MGP_PahariEiJ_G0026310's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0026310's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0026310	Ythdf3	94	64.789	MGP_PahariEiJ_G0028892	Ythdf2	96	64.378

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0026310	Ythdf3	100	98.291	ENSG00000185728	YTHDF3	100	99.099	Homo_sapiens
MGP_PahariEiJ_G0026310	Ythdf3	100	97.265	ENSAMEG00000018113	YTHDF3	100	97.265	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0026310	Ythdf3	99	69.931	ENSATEG00000011478	ythdf3	94	93.514	Anabas_testudineus
MGP_PahariEiJ_G0026310	Ythdf3	98	94.046	ENSAPLG00000011329	YTHDF3	97	92.157	Anas_platyrhynchos
MGP_PahariEiJ_G0026310	Ythdf3	100	92.479	ENSACAG00000016837	YTHDF3	100	91.282	Anolis_carolinensis
MGP_PahariEiJ_G0026310	Ythdf3	100	98.120	ENSANAG00000037920	YTHDF3	100	98.120	Aotus_nancymaae
MGP_PahariEiJ_G0026310	Ythdf3	98	79.392	ENSAMXG00000030366	ythdf3	97	76.701	Astyanax_mexicanus
MGP_PahariEiJ_G0026310	Ythdf3	100	97.619	ENSBTAG00000018557	YTHDF3	100	97.619	Bos_taurus
MGP_PahariEiJ_G0026310	Ythdf3	100	98.120	ENSCJAG00000009217	YTHDF3	100	98.120	Callithrix_jacchus
MGP_PahariEiJ_G0026310	Ythdf3	100	97.959	ENSCAFG00000007215	YTHDF3	100	97.959	Canis_familiaris
MGP_PahariEiJ_G0026310	Ythdf3	100	97.949	ENSCAFG00020015995	YTHDF3	100	97.949	Canis_lupus_dingo
MGP_PahariEiJ_G0026310	Ythdf3	100	97.949	ENSCHIG00000026460	YTHDF3	100	97.949	Capra_hircus
MGP_PahariEiJ_G0026310	Ythdf3	100	97.789	ENSTSYG00000009117	YTHDF3	100	97.789	Carlito_syrichta
MGP_PahariEiJ_G0026310	Ythdf3	99	97.227	ENSCAPG00000014006	YTHDF3	100	97.227	Cavia_aperea
MGP_PahariEiJ_G0026310	Ythdf3	100	97.949	ENSCPOG00000002961	YTHDF3	100	97.949	Cavia_porcellus
MGP_PahariEiJ_G0026310	Ythdf3	100	97.949	ENSCCAG00000022316	YTHDF3	100	97.949	Cebus_capucinus
MGP_PahariEiJ_G0026310	Ythdf3	100	98.291	ENSCATG00000038669	YTHDF3	100	98.291	Cercocebus_atys
MGP_PahariEiJ_G0026310	Ythdf3	99	98.094	ENSCLAG00000002515	YTHDF3	100	98.094	Chinchilla_lanigera
MGP_PahariEiJ_G0026310	Ythdf3	100	98.291	ENSCSAG00000014280	YTHDF3	100	98.291	Chlorocebus_sabaeus
MGP_PahariEiJ_G0026310	Ythdf3	99	95.862	ENSCHOG00000010194	YTHDF3	97	97.336	Choloepus_hoffmanni
MGP_PahariEiJ_G0026310	Ythdf3	100	92.150	ENSCPBG00000021405	YTHDF3	100	91.468	Chrysemys_picta_bellii
MGP_PahariEiJ_G0026310	Ythdf3	100	98.291	ENSCANG00000032631	YTHDF3	100	98.291	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0026310	Ythdf3	100	98.810	ENSCGRG00001021204	Ythdf3	100	98.810	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0026310	Ythdf3	100	98.299	ENSCGRG00000005613	-	100	98.299	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0026310	Ythdf3	68	67.342	ENSCGRG00000008289	-	64	73.077	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0026310	Ythdf3	100	79.835	ENSDARG00000057939	ythdf3	100	76.268	Danio_rerio
MGP_PahariEiJ_G0026310	Ythdf3	100	96.774	ENSDNOG00000037156	YTHDF3	100	96.774	Dasypus_novemcinctus
MGP_PahariEiJ_G0026310	Ythdf3	100	97.607	ENSDORG00000014699	Ythdf3	100	97.607	Dipodomys_ordii
MGP_PahariEiJ_G0026310	Ythdf3	97	97.544	ENSETEG00000007144	YTHDF3	100	97.544	Echinops_telfairi
MGP_PahariEiJ_G0026310	Ythdf3	100	98.120	ENSEASG00005016224	YTHDF3	100	98.120	Equus_asinus_asinus
MGP_PahariEiJ_G0026310	Ythdf3	100	98.129	ENSECAG00000011093	YTHDF3	100	98.129	Equus_caballus
MGP_PahariEiJ_G0026310	Ythdf3	100	97.959	ENSFCAG00000025314	YTHDF3	100	97.959	Felis_catus
MGP_PahariEiJ_G0026310	Ythdf3	99	93.599	ENSFALG00000005503	YTHDF3	100	92.135	Ficedula_albicollis
MGP_PahariEiJ_G0026310	Ythdf3	99	97.920	ENSFDAG00000002735	YTHDF3	100	97.920	Fukomys_damarensis
MGP_PahariEiJ_G0026310	Ythdf3	100	94.188	ENSGALG00000039774	YTHDF3	100	92.479	Gallus_gallus
MGP_PahariEiJ_G0026310	Ythdf3	100	91.980	ENSGAGG00000003851	YTHDF3	100	91.297	Gopherus_agassizii
MGP_PahariEiJ_G0026310	Ythdf3	100	98.129	ENSGGOG00000027681	YTHDF3	100	98.315	Gorilla_gorilla
MGP_PahariEiJ_G0026310	Ythdf3	100	97.949	ENSHGLG00000009954	YTHDF3	100	97.949	Heterocephalus_glaber_female
MGP_PahariEiJ_G0026310	Ythdf3	99	97.920	ENSHGLG00100012403	YTHDF3	100	97.920	Heterocephalus_glaber_male
MGP_PahariEiJ_G0026310	Ythdf3	100	77.670	ENSIPUG00000014157	YTHDF1	97	78.475	Ictalurus_punctatus
MGP_PahariEiJ_G0026310	Ythdf3	100	97.789	ENSSTOG00000027792	YTHDF3	100	97.789	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0026310	Ythdf3	99	98.094	ENSJJAG00000017742	Ythdf3	100	98.094	Jaculus_jaculus
MGP_PahariEiJ_G0026310	Ythdf3	100	74.152	ENSKMAG00000008447	ythdf3	97	87.097	Kryptolebias_marmoratus
MGP_PahariEiJ_G0026310	Ythdf3	100	82.972	ENSLACG00000002281	YTHDF3	100	82.972	Latimeria_chalumnae
MGP_PahariEiJ_G0026310	Ythdf3	100	95.638	ENSLAFG00000016052	YTHDF3	100	95.638	Loxodonta_africana
MGP_PahariEiJ_G0026310	Ythdf3	100	98.291	ENSMFAG00000043451	YTHDF3	100	98.315	Macaca_fascicularis
MGP_PahariEiJ_G0026310	Ythdf3	100	98.291	ENSMMUG00000006729	YTHDF3	100	98.315	Macaca_mulatta
MGP_PahariEiJ_G0026310	Ythdf3	100	98.291	ENSMNEG00000031200	YTHDF3	100	98.315	Macaca_nemestrina
MGP_PahariEiJ_G0026310	Ythdf3	100	98.291	ENSMLEG00000036763	YTHDF3	100	98.291	Mandrillus_leucophaeus
MGP_PahariEiJ_G0026310	Ythdf3	100	93.333	ENSMGAG00000011168	YTHDF3	100	91.624	Meleagris_gallopavo
MGP_PahariEiJ_G0026310	Ythdf3	66	94.344	ENSMAUG00000012560	Ythdf3	97	93.386	Mesocricetus_auratus
MGP_PahariEiJ_G0026310	Ythdf3	100	98.469	ENSMICG00000036869	-	100	98.469	Microcebus_murinus
MGP_PahariEiJ_G0026310	Ythdf3	68	77.468	ENSMICG00000009379	-	100	75.443	Microcebus_murinus
MGP_PahariEiJ_G0026310	Ythdf3	100	97.959	ENSMOCG00000011947	Ythdf3	100	97.959	Microtus_ochrogaster
MGP_PahariEiJ_G0026310	Ythdf3	96	67.553	ENSMMOG00000003402	ythdf3	92	89.894	Mola_mola
MGP_PahariEiJ_G0026310	Ythdf3	100	96.416	ENSMODG00000008255	YTHDF3	100	96.416	Monodelphis_domestica
MGP_PahariEiJ_G0026310	Ythdf3	100	99.329	MGP_CAROLIEiJ_G0024863	Ythdf3	100	99.329	Mus_caroli
MGP_PahariEiJ_G0026310	Ythdf3	100	99.329	ENSMUSG00000047213	Ythdf3	100	99.329	Mus_musculus
MGP_PahariEiJ_G0026310	Ythdf3	100	99.161	MGP_SPRETEiJ_G0025794	Ythdf3	100	99.161	Mus_spretus
MGP_PahariEiJ_G0026310	Ythdf3	100	97.949	ENSMPUG00000009857	YTHDF3	100	97.949	Mustela_putorius_furo
MGP_PahariEiJ_G0026310	Ythdf3	99	97.590	ENSMLUG00000006541	YTHDF3	99	97.590	Myotis_lucifugus
MGP_PahariEiJ_G0026310	Ythdf3	92	97.761	ENSNGAG00000018434	Ythdf3	96	97.761	Nannospalax_galili
MGP_PahariEiJ_G0026310	Ythdf3	87	86.522	ENSNBRG00000023433	ythdf3	89	87.156	Neolamprologus_brichardi
MGP_PahariEiJ_G0026310	Ythdf3	100	98.120	ENSNLEG00000003872	YTHDF3	100	98.120	Nomascus_leucogenys
MGP_PahariEiJ_G0026310	Ythdf3	99	95.869	ENSMEUG00000011285	YTHDF3	100	95.869	Notamacropus_eugenii
MGP_PahariEiJ_G0026310	Ythdf3	99	97.054	ENSODEG00000002033	YTHDF3	100	97.054	Octodon_degus
MGP_PahariEiJ_G0026310	Ythdf3	99	92.599	ENSOANG00000005053	YTHDF3	100	90.534	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0026310	Ythdf3	100	96.644	ENSOCUG00000008723	YTHDF3	100	96.644	Oryctolagus_cuniculus
MGP_PahariEiJ_G0026310	Ythdf3	99	75.815	ENSOMEG00000008212	ythdf3	99	75.472	Oryzias_melastigma
MGP_PahariEiJ_G0026310	Ythdf3	99	97.432	ENSOGAG00000002302	YTHDF3	99	97.432	Otolemur_garnettii
MGP_PahariEiJ_G0026310	Ythdf3	98	97.565	ENSOARG00000016882	YTHDF3	98	97.565	Ovis_aries
MGP_PahariEiJ_G0026310	Ythdf3	100	97.949	ENSPPAG00000043483	YTHDF3	100	97.949	Pan_paniscus
MGP_PahariEiJ_G0026310	Ythdf3	100	97.959	ENSPPRG00000004665	YTHDF3	100	97.959	Panthera_pardus
MGP_PahariEiJ_G0026310	Ythdf3	100	97.959	ENSPTIG00000021537	YTHDF3	100	97.959	Panthera_tigris_altaica
MGP_PahariEiJ_G0026310	Ythdf3	100	98.120	ENSPTRG00000049135	YTHDF3	100	98.120	Pan_troglodytes
MGP_PahariEiJ_G0026310	Ythdf3	100	98.291	ENSPANG00000008030	YTHDF3	100	98.291	Papio_anubis
MGP_PahariEiJ_G0026310	Ythdf3	99	80.345	ENSPKIG00000008298	ythdf3	96	80.496	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0026310	Ythdf3	100	93.857	ENSPSIG00000015861	YTHDF3	100	93.345	Pelodiscus_sinensis
MGP_PahariEiJ_G0026310	Ythdf3	100	99.150	ENSPEMG00000020975	Ythdf3	100	99.150	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0026310	Ythdf3	100	96.587	ENSPCIG00000017629	YTHDF3	100	96.587	Phascolarctos_cinereus
MGP_PahariEiJ_G0026310	Ythdf3	91	98.936	ENSPPYG00000018626	YTHDF3	100	96.852	Pongo_abelii
MGP_PahariEiJ_G0026310	Ythdf3	99	96.897	ENSPCAG00000016282	YTHDF3	100	96.897	Procavia_capensis
MGP_PahariEiJ_G0026310	Ythdf3	100	98.469	ENSPCOG00000004856	YTHDF3	100	98.469	Propithecus_coquereli
MGP_PahariEiJ_G0026310	Ythdf3	85	99.468	ENSPVAG00000002740	YTHDF3	86	99.468	Pteropus_vampyrus
MGP_PahariEiJ_G0026310	Ythdf3	87	86.522	ENSPNYG00000002949	ythdf3	96	87.156	Pundamilia_nyererei
MGP_PahariEiJ_G0026310	Ythdf3	100	99.145	ENSRNOG00000010084	Ythdf3	100	99.145	Rattus_norvegicus
MGP_PahariEiJ_G0026310	Ythdf3	100	98.120	ENSRBIG00000036465	YTHDF3	100	98.120	Rhinopithecus_bieti
MGP_PahariEiJ_G0026310	Ythdf3	100	97.949	ENSRROG00000035231	YTHDF3	100	97.949	Rhinopithecus_roxellana
MGP_PahariEiJ_G0026310	Ythdf3	100	98.120	ENSSBOG00000035287	YTHDF3	100	98.120	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0026310	Ythdf3	100	96.082	ENSSHAG00000009482	YTHDF3	100	96.082	Sarcophilus_harrisii
MGP_PahariEiJ_G0026310	Ythdf3	96	72.906	ENSSFOG00015015445	ythdf3	96	74.865	Scleropages_formosus
MGP_PahariEiJ_G0026310	Ythdf3	97	97.895	ENSSARG00000007626	YTHDF3	99	97.895	Sorex_araneus
MGP_PahariEiJ_G0026310	Ythdf3	99	92.241	ENSSPUG00000009390	YTHDF3	98	91.549	Sphenodon_punctatus
MGP_PahariEiJ_G0026310	Ythdf3	91	98.127	ENSSSCG00000033144	YTHDF3	100	98.127	Sus_scrofa
MGP_PahariEiJ_G0026310	Ythdf3	98	93.717	ENSTGUG00000011243	YTHDF3	98	91.979	Taeniopygia_guttata
MGP_PahariEiJ_G0026310	Ythdf3	80	97.156	ENSTBEG00000005747	YTHDF3	81	97.156	Tupaia_belangeri
MGP_PahariEiJ_G0026310	Ythdf3	99	88.793	ENSTTRG00000014564	YTHDF3	98	88.556	Tursiops_truncatus
MGP_PahariEiJ_G0026310	Ythdf3	100	98.129	ENSUAMG00000012624	YTHDF3	100	98.129	Ursus_americanus
MGP_PahariEiJ_G0026310	Ythdf3	100	98.129	ENSUMAG00000014104	YTHDF3	100	98.129	Ursus_maritimus
MGP_PahariEiJ_G0026310	Ythdf3	99	85.198	ENSVPAG00000008104	YTHDF3	98	84.007	Vicugna_pacos
MGP_PahariEiJ_G0026310	Ythdf3	100	97.959	ENSVVUG00000018384	YTHDF3	100	97.959	Vulpes_vulpes
MGP_PahariEiJ_G0026310	Ythdf3	100	87.692	ENSXETG00000021659	ythdf3	100	88.034	Xenopus_tropicalis
MGP_PahariEiJ_G0026310	Ythdf3	99	74.419	ENSXCOG00000009687	ythdf3	99	76.289	Xiphophorus_couchianus
MGP_PahariEiJ_G0026310	Ythdf3	100	75.935	ENSXMAG00000009698	ythdf3	99	76.632	Xiphophorus_maculatus