EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0026495 (Gene tree)
Gene ID: 110319940
Gene Symbol: Gfm1
Alias: D3Wsu133e
Full Name: G elongation factor mitochondrial 1
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 48978 bases
Position: chr4:59628803-59677780
Accession: 110319940
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0068895	GTP_EFTU	PF00009.27	3.7e-63	1	1
MGP_PahariEiJ_P0068895	GTP_EFTU_D2	PF03144.25	9.2e-17	1	1
MGP_PahariEiJ_P0068895	EFG_IV	PF03764.18	3e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0068898	-	914	-	-	- (aa)	-	-
MGP_PahariEiJ_T0068895	-	4053	-	MGP_PahariEiJ_P0068895	751 (aa)	XP_021051352	UPI000A309940
MGP_PahariEiJ_T0068896	-	1964	-	-	- (aa)	-	-
MGP_PahariEiJ_T0068897	-	1605	-	MGP_PahariEiJ_P0068897	534 (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0026495's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0026495's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0026495	Gfm1	70	32.536	MGP_PahariEiJ_G0017055	Guf1	68	32.692
MGP_PahariEiJ_G0026495	Gfm1	92	37.452	MGP_PahariEiJ_G0015889	Gfm2	91	34.884
MGP_PahariEiJ_G0026495	Gfm1	71	38.926	MGP_PahariEiJ_G0031035	Eef2	70	38.926

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0026495	Gfm1	98	91.304	ENSG00000168827	GFM1	100	98.333	Homo_sapiens
MGP_PahariEiJ_G0026495	Gfm1	100	78.652	ENSAPOG00000016489	gfm1	99	76.890	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0026495	Gfm1	98	91.881	ENSAMEG00000013542	GFM1	100	91.512	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0026495	Gfm1	96	75.862	ENSACIG00000014465	gfm1	94	75.862	Amphilophus_citrinellus
MGP_PahariEiJ_G0026495	Gfm1	100	78.277	ENSAOCG00000006023	gfm1	99	77.882	Amphiprion_ocellaris
MGP_PahariEiJ_G0026495	Gfm1	100	78.277	ENSAPEG00000024499	gfm1	98	80.478	Amphiprion_percula
MGP_PahariEiJ_G0026495	Gfm1	100	78.277	ENSATEG00000013789	gfm1	100	77.896	Anabas_testudineus
MGP_PahariEiJ_G0026495	Gfm1	95	84.262	ENSAPLG00000005022	GFM1	99	84.262	Anas_platyrhynchos
MGP_PahariEiJ_G0026495	Gfm1	95	85.265	ENSACAG00000006829	GFM1	98	82.920	Anolis_carolinensis
MGP_PahariEiJ_G0026495	Gfm1	100	90.981	ENSANAG00000035983	GFM1	100	90.981	Aotus_nancymaae
MGP_PahariEiJ_G0026495	Gfm1	97	81.517	ENSACLG00000016586	gfm1	99	80.330	Astatotilapia_calliptera
MGP_PahariEiJ_G0026495	Gfm1	100	78.961	ENSAMXG00000013435	gfm1	98	79.946	Astyanax_mexicanus
MGP_PahariEiJ_G0026495	Gfm1	100	93.227	ENSBTAG00000027795	GFM1	100	93.227	Bos_taurus
MGP_PahariEiJ_G0026495	Gfm1	92	62.475	WBGene00009246	gfm-1	95	56.742	Caenorhabditis_elegans
MGP_PahariEiJ_G0026495	Gfm1	100	91.114	ENSCJAG00000000363	GFM1	100	91.114	Callithrix_jacchus
MGP_PahariEiJ_G0026495	Gfm1	98	92.673	ENSCAFG00000009006	GFM1	100	93.935	Canis_familiaris
MGP_PahariEiJ_G0026495	Gfm1	98	92.828	ENSCAFG00020005878	GFM1	99	93.646	Canis_lupus_dingo
MGP_PahariEiJ_G0026495	Gfm1	100	93.360	ENSCHIG00000015220	GFM1	100	93.360	Capra_hircus
MGP_PahariEiJ_G0026495	Gfm1	100	91.766	ENSTSYG00000002013	GFM1	100	91.766	Carlito_syrichta
MGP_PahariEiJ_G0026495	Gfm1	98	80.054	ENSCAPG00000005699	GFM1	99	80.054	Cavia_aperea
MGP_PahariEiJ_G0026495	Gfm1	100	91.247	ENSCPOG00000001194	GFM1	100	91.247	Cavia_porcellus
MGP_PahariEiJ_G0026495	Gfm1	100	90.849	ENSCCAG00000025561	GFM1	100	90.849	Cebus_capucinus
MGP_PahariEiJ_G0026495	Gfm1	100	90.716	ENSCATG00000037622	GFM1	100	90.716	Cercocebus_atys
MGP_PahariEiJ_G0026495	Gfm1	98	91.396	ENSCLAG00000002503	GFM1	99	90.897	Chinchilla_lanigera
MGP_PahariEiJ_G0026495	Gfm1	100	90.849	ENSCSAG00000012162	GFM1	100	90.849	Chlorocebus_sabaeus
MGP_PahariEiJ_G0026495	Gfm1	100	83.024	ENSCHOG00000004867	GFM1	100	83.024	Choloepus_hoffmanni
MGP_PahariEiJ_G0026495	Gfm1	100	82.690	ENSCPBG00000018367	GFM1	99	82.690	Chrysemys_picta_bellii
MGP_PahariEiJ_G0026495	Gfm1	95	59.474	ENSCING00000011960	-	94	59.474	Ciona_intestinalis
MGP_PahariEiJ_G0026495	Gfm1	94	61.341	ENSCSAVG00000008514	-	99	60.194	Ciona_savignyi
MGP_PahariEiJ_G0026495	Gfm1	98	91.576	ENSCANG00000031714	GFM1	100	90.849	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0026495	Gfm1	100	95.073	ENSCGRG00001022095	GFM1	100	95.073	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0026495	Gfm1	100	95.073	ENSCGRG00000012043	GFM1	100	95.073	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0026495	Gfm1	95	76.151	ENSCSEG00000017088	gfm1	98	76.151	Cynoglossus_semilaevis
MGP_PahariEiJ_G0026495	Gfm1	100	79.213	ENSCVAG00000004126	gfm1	99	81.127	Cyprinodon_variegatus
MGP_PahariEiJ_G0026495	Gfm1	100	77.230	ENSDARG00000063624	gfm1	100	77.230	Danio_rerio
MGP_PahariEiJ_G0026495	Gfm1	54	89.242	ENSDNOG00000016385	-	100	89.242	Dasypus_novemcinctus
MGP_PahariEiJ_G0026495	Gfm1	100	89.362	ENSDORG00000014165	Gfm1	100	89.362	Dipodomys_ordii
MGP_PahariEiJ_G0026495	Gfm1	95	69.625	FBgn0263133	mEFG1	95	67.419	Drosophila_melanogaster
MGP_PahariEiJ_G0026495	Gfm1	98	81.511	ENSETEG00000019197	GFM1	100	81.217	Echinops_telfairi
MGP_PahariEiJ_G0026495	Gfm1	90	67.160	ENSEBUG00000012794	gfm1	100	67.160	Eptatretus_burgeri
MGP_PahariEiJ_G0026495	Gfm1	94	72.781	ENSEEUG00000000429	GFM1	99	68.646	Erinaceus_europaeus
MGP_PahariEiJ_G0026495	Gfm1	100	77.097	ENSELUG00000014728	gfm1	100	77.097	Esox_lucius
MGP_PahariEiJ_G0026495	Gfm1	98	93.099	ENSFCAG00000013291	GFM1	100	92.838	Felis_catus
MGP_PahariEiJ_G0026495	Gfm1	90	84.000	ENSFALG00000007619	GFM1	100	84.000	Ficedula_albicollis
MGP_PahariEiJ_G0026495	Gfm1	100	90.318	ENSFDAG00000016559	GFM1	100	90.318	Fukomys_damarensis
MGP_PahariEiJ_G0026495	Gfm1	100	78.961	ENSFHEG00000006091	gfm1	100	78.961	Fundulus_heteroclitus
MGP_PahariEiJ_G0026495	Gfm1	95	78.502	ENSGMOG00000010161	gfm1	99	78.502	Gadus_morhua
MGP_PahariEiJ_G0026495	Gfm1	98	82.153	ENSGALG00000009634	GFM1	99	82.153	Gallus_gallus
MGP_PahariEiJ_G0026495	Gfm1	100	79.588	ENSGAFG00000012527	gfm1	100	78.961	Gambusia_affinis
MGP_PahariEiJ_G0026495	Gfm1	100	77.291	ENSGACG00000009864	gfm1	100	77.291	Gasterosteus_aculeatus
MGP_PahariEiJ_G0026495	Gfm1	51	68.364	ENSGAGG00000002769	-	90	90.355	Gopherus_agassizii
MGP_PahariEiJ_G0026495	Gfm1	98	91.576	ENSGGOG00000003085	GFM1	100	90.849	Gorilla_gorilla
MGP_PahariEiJ_G0026495	Gfm1	97	81.517	ENSHBUG00000002120	gfm1	97	81.517	Haplochromis_burtoni
MGP_PahariEiJ_G0026495	Gfm1	98	91.475	ENSHGLG00000016855	GFM1	100	90.584	Heterocephalus_glaber_female
MGP_PahariEiJ_G0026495	Gfm1	98	91.475	ENSHGLG00100013049	GFM1	100	90.584	Heterocephalus_glaber_male
MGP_PahariEiJ_G0026495	Gfm1	100	77.528	ENSHCOG00000007638	gfm1	97	81.056	Hippocampus_comes
MGP_PahariEiJ_G0026495	Gfm1	97	79.862	ENSIPUG00000005873	gfm1	100	78.029	Ictalurus_punctatus
MGP_PahariEiJ_G0026495	Gfm1	100	89.628	ENSSTOG00000010150	GFM1	100	89.628	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0026495	Gfm1	100	91.345	ENSJJAG00000016447	Gfm1	100	91.345	Jaculus_jaculus
MGP_PahariEiJ_G0026495	Gfm1	100	77.630	ENSKMAG00000020768	gfm1	100	77.630	Kryptolebias_marmoratus
MGP_PahariEiJ_G0026495	Gfm1	99	78.612	ENSLBEG00000021315	gfm1	100	80.742	Labrus_bergylta
MGP_PahariEiJ_G0026495	Gfm1	100	79.228	ENSLACG00000012295	GFM1	100	79.228	Latimeria_chalumnae
MGP_PahariEiJ_G0026495	Gfm1	96	76.138	ENSLOCG00000003778	gfm1	99	76.138	Lepisosteus_oculatus
MGP_PahariEiJ_G0026495	Gfm1	99	88.594	ENSLAFG00000010945	GFM1	100	88.690	Loxodonta_africana
MGP_PahariEiJ_G0026495	Gfm1	100	90.981	ENSMFAG00000035731	GFM1	100	90.981	Macaca_fascicularis
MGP_PahariEiJ_G0026495	Gfm1	100	91.114	ENSMMUG00000004961	GFM1	100	91.114	Macaca_mulatta
MGP_PahariEiJ_G0026495	Gfm1	100	91.061	ENSMNEG00000033245	GFM1	100	90.849	Macaca_nemestrina
MGP_PahariEiJ_G0026495	Gfm1	96	89.931	ENSMLEG00000030908	GFM1	99	89.879	Mandrillus_leucophaeus
MGP_PahariEiJ_G0026495	Gfm1	97	80.828	ENSMAMG00000011760	gfm1	97	80.828	Mastacembelus_armatus
MGP_PahariEiJ_G0026495	Gfm1	97	81.517	ENSMZEG00005016639	gfm1	97	81.517	Maylandia_zebra
MGP_PahariEiJ_G0026495	Gfm1	95	83.403	ENSMGAG00000010641	GFM1	96	83.403	Meleagris_gallopavo
MGP_PahariEiJ_G0026495	Gfm1	100	94.541	ENSMAUG00000000611	Gfm1	100	94.541	Mesocricetus_auratus
MGP_PahariEiJ_G0026495	Gfm1	98	92.527	ENSMICG00000049086	GFM1	100	91.645	Microcebus_murinus
MGP_PahariEiJ_G0026495	Gfm1	100	94.807	ENSMOCG00000000465	Gfm1	100	94.807	Microtus_ochrogaster
MGP_PahariEiJ_G0026495	Gfm1	95	80.335	ENSMMOG00000012538	gfm1	97	80.335	Mola_mola
MGP_PahariEiJ_G0026495	Gfm1	100	85.486	ENSMODG00000015673	GFM1	100	85.486	Monodelphis_domestica
MGP_PahariEiJ_G0026495	Gfm1	95	81.180	ENSMALG00000012508	gfm1	95	81.180	Monopterus_albus
MGP_PahariEiJ_G0026495	Gfm1	100	98.502	MGP_CAROLIEiJ_G0025052	Gfm1	100	98.502	Mus_caroli
MGP_PahariEiJ_G0026495	Gfm1	100	98.402	ENSMUSG00000027774	Gfm1	100	98.402	Mus_musculus
MGP_PahariEiJ_G0026495	Gfm1	100	98.689	MGP_SPRETEiJ_G0025994	Gfm1	100	98.689	Mus_spretus
MGP_PahariEiJ_G0026495	Gfm1	100	91.512	ENSMPUG00000002859	GFM1	100	91.512	Mustela_putorius_furo
MGP_PahariEiJ_G0026495	Gfm1	100	92.308	ENSMLUG00000000452	GFM1	100	92.308	Myotis_lucifugus
MGP_PahariEiJ_G0026495	Gfm1	100	93.209	ENSNGAG00000012375	Gfm1	100	93.209	Nannospalax_galili
MGP_PahariEiJ_G0026495	Gfm1	96	81.354	ENSNBRG00000004631	gfm1	99	81.354	Neolamprologus_brichardi
MGP_PahariEiJ_G0026495	Gfm1	98	91.712	ENSNLEG00000004176	GFM1	100	90.981	Nomascus_leucogenys
MGP_PahariEiJ_G0026495	Gfm1	94	79.167	ENSMEUG00000007784	GFM1	99	78.739	Notamacropus_eugenii
MGP_PahariEiJ_G0026495	Gfm1	100	89.096	ENSOPRG00000009860	GFM1	100	89.096	Ochotona_princeps
MGP_PahariEiJ_G0026495	Gfm1	98	91.954	ENSODEG00000004316	GFM1	100	91.114	Octodon_degus
MGP_PahariEiJ_G0026495	Gfm1	97	81.517	ENSONIG00000003772	gfm1	97	81.517	Oreochromis_niloticus
MGP_PahariEiJ_G0026495	Gfm1	98	93.487	ENSOCUG00000013561	GFM1	100	92.706	Oryctolagus_cuniculus
MGP_PahariEiJ_G0026495	Gfm1	92	83.673	ENSORLG00000006487	gfm1	100	81.497	Oryzias_latipes
MGP_PahariEiJ_G0026495	Gfm1	97	80.414	ENSORLG00020003362	gfm1	97	80.414	Oryzias_latipes_hni
MGP_PahariEiJ_G0026495	Gfm1	97	80.000	ENSORLG00015005829	gfm1	97	80.000	Oryzias_latipes_hsok
MGP_PahariEiJ_G0026495	Gfm1	97	81.103	ENSOMEG00000012894	gfm1	97	81.103	Oryzias_melastigma
MGP_PahariEiJ_G0026495	Gfm1	100	91.061	ENSOGAG00000008298	GFM1	100	90.981	Otolemur_garnettii
MGP_PahariEiJ_G0026495	Gfm1	96	93.398	ENSOARG00000002409	GFM1	100	93.398	Ovis_aries
MGP_PahariEiJ_G0026495	Gfm1	98	91.576	ENSPPAG00000033881	GFM1	100	90.849	Pan_paniscus
MGP_PahariEiJ_G0026495	Gfm1	98	92.963	ENSPPRG00000009281	GFM1	100	92.706	Panthera_pardus
MGP_PahariEiJ_G0026495	Gfm1	98	92.828	ENSPTIG00000012416	GFM1	100	92.573	Panthera_tigris_altaica
MGP_PahariEiJ_G0026495	Gfm1	98	91.576	ENSPTRG00000015570	GFM1	100	90.849	Pan_troglodytes
MGP_PahariEiJ_G0026495	Gfm1	100	90.875	ENSPANG00000016512	GFM1	100	90.849	Papio_anubis
MGP_PahariEiJ_G0026495	Gfm1	100	78.961	ENSPKIG00000004876	gfm1	100	78.961	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0026495	Gfm1	100	81.491	ENSPSIG00000012567	GFM1	99	81.491	Pelodiscus_sinensis
MGP_PahariEiJ_G0026495	Gfm1	95	78.720	ENSPMGG00000014068	gfm1	99	78.720	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0026495	Gfm1	100	95.206	ENSPEMG00000008942	Gfm1	100	95.206	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0026495	Gfm1	99	85.206	ENSPCIG00000020195	GFM1	98	85.335	Phascolarctos_cinereus
MGP_PahariEiJ_G0026495	Gfm1	100	79.963	ENSPFOG00000011022	gfm1	100	79.760	Poecilia_formosa
MGP_PahariEiJ_G0026495	Gfm1	100	79.775	ENSPLAG00000019585	gfm1	100	79.301	Poecilia_latipinna
MGP_PahariEiJ_G0026495	Gfm1	100	79.775	ENSPMEG00000012376	gfm1	100	79.627	Poecilia_mexicana
MGP_PahariEiJ_G0026495	Gfm1	100	79.401	ENSPREG00000001332	gfm1	95	79.361	Poecilia_reticulata
MGP_PahariEiJ_G0026495	Gfm1	98	91.848	ENSPPYG00000014244	GFM1	100	91.114	Pongo_abelii
MGP_PahariEiJ_G0026495	Gfm1	93	88.193	ENSPCAG00000008934	GFM1	100	88.193	Procavia_capensis
MGP_PahariEiJ_G0026495	Gfm1	98	92.663	ENSPCOG00000022259	GFM1	100	91.910	Propithecus_coquereli
MGP_PahariEiJ_G0026495	Gfm1	100	91.512	ENSPVAG00000013605	GFM1	100	91.512	Pteropus_vampyrus
MGP_PahariEiJ_G0026495	Gfm1	97	81.241	ENSPNYG00000006037	gfm1	98	81.354	Pundamilia_nyererei
MGP_PahariEiJ_G0026495	Gfm1	100	78.695	ENSPNAG00000001237	gfm1	100	78.695	Pygocentrus_nattereri
MGP_PahariEiJ_G0026495	Gfm1	100	95.606	ENSRNOG00000012873	Gfm1	100	95.606	Rattus_norvegicus
MGP_PahariEiJ_G0026495	Gfm1	98	91.440	ENSRBIG00000031363	GFM1	100	90.716	Rhinopithecus_bieti
MGP_PahariEiJ_G0026495	Gfm1	98	91.576	ENSRROG00000031081	GFM1	100	90.849	Rhinopithecus_roxellana
MGP_PahariEiJ_G0026495	Gfm1	91	61.507	YLR069C	-	90	57.122	Saccharomyces_cerevisiae
MGP_PahariEiJ_G0026495	Gfm1	100	91.379	ENSSBOG00000023252	GFM1	100	91.379	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0026495	Gfm1	99	86.957	ENSSHAG00000017772	GFM1	99	86.729	Sarcophilus_harrisii
MGP_PahariEiJ_G0026495	Gfm1	100	79.095	ENSSFOG00015003117	gfm1	99	81.241	Scleropages_formosus
MGP_PahariEiJ_G0026495	Gfm1	100	76.831	ENSSMAG00000013221	gfm1	100	76.298	Scophthalmus_maximus
MGP_PahariEiJ_G0026495	Gfm1	100	77.630	ENSSDUG00000018665	gfm1	100	77.630	Seriola_dumerili
MGP_PahariEiJ_G0026495	Gfm1	100	77.630	ENSSLDG00000020606	gfm1	100	77.630	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0026495	Gfm1	95	82.283	ENSSPUG00000018686	GFM1	97	81.869	Sphenodon_punctatus
MGP_PahariEiJ_G0026495	Gfm1	100	77.630	ENSSPAG00000008800	gfm1	100	77.630	Stegastes_partitus
MGP_PahariEiJ_G0026495	Gfm1	100	91.645	ENSSSCG00000025651	GFM1	100	91.645	Sus_scrofa
MGP_PahariEiJ_G0026495	Gfm1	100	78.277	ENSTRUG00000009244	gfm1	100	77.896	Takifugu_rubripes
MGP_PahariEiJ_G0026495	Gfm1	100	78.429	ENSTNIG00000007729	gfm1	100	78.429	Tetraodon_nigroviridis
MGP_PahariEiJ_G0026495	Gfm1	98	77.463	ENSTBEG00000017404	GFM1	100	77.381	Tupaia_belangeri
MGP_PahariEiJ_G0026495	Gfm1	98	92.141	ENSTTRG00000001735	GFM1	100	90.753	Tursiops_truncatus
MGP_PahariEiJ_G0026495	Gfm1	98	92.287	ENSUAMG00000026381	GFM1	100	91.910	Ursus_americanus
MGP_PahariEiJ_G0026495	Gfm1	98	92.287	ENSUMAG00000011268	GFM1	100	91.910	Ursus_maritimus
MGP_PahariEiJ_G0026495	Gfm1	100	88.845	ENSVPAG00000009444	GFM1	100	88.845	Vicugna_pacos
MGP_PahariEiJ_G0026495	Gfm1	99	91.322	ENSVVUG00000020091	GFM1	100	93.491	Vulpes_vulpes
MGP_PahariEiJ_G0026495	Gfm1	100	82.580	ENSXETG00000032551	GFM1	100	82.580	Xenopus_tropicalis
MGP_PahariEiJ_G0026495	Gfm1	72	81.865	ENSXCOG00000012590	gfm1	89	81.865	Xiphophorus_couchianus
MGP_PahariEiJ_G0026495	Gfm1	100	79.588	ENSXMAG00000000261	gfm1	100	79.095	Xiphophorus_maculatus