EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0026512 (Gene tree)
Gene ID: 110320056
Gene Symbol: Nmd3
Alias: C87860
Full Name: NMD3 ribosome export adaptor
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 35126 bases
Position: chr4:61787755-61822880
Accession: 110320056
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0068959	NMD3	PF04981.13	6.9e-80	1	1
MGP_PahariEiJ_P0068962	NMD3	PF04981.13	5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0068959	-	9073	-	MGP_PahariEiJ_P0068959	503 (aa)	XP_021051589	UPI000A30455E
MGP_PahariEiJ_T0068958	-	401	-	-	- (aa)	-	-
MGP_PahariEiJ_T0068960	-	490	-	MGP_PahariEiJ_P0068960	36 (aa)	-	-
MGP_PahariEiJ_T0068961	-	692	-	MGP_PahariEiJ_P0068961	144 (aa)	-	-
MGP_PahariEiJ_T0068962	-	395	-	MGP_PahariEiJ_P0068962	76 (aa)	-	-
MGP_PahariEiJ_T0068963	-	850	-	-	- (aa)	-	-
MGP_PahariEiJ_T0068964	-	755	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0026512's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0026512's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0026512	Nmd3	100	94.632	ENSG00000169251	NMD3	100	95.872	Homo_sapiens
MGP_PahariEiJ_G0026512	Nmd3	100	76.190	ENSAPOG00000022912	nmd3	99	76.190	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0026512	Nmd3	100	94.643	ENSAMEG00000001584	NMD3	99	94.643	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0026512	Nmd3	100	72.421	ENSACIG00000015196	nmd3	99	72.421	Amphilophus_citrinellus
MGP_PahariEiJ_G0026512	Nmd3	100	76.190	ENSAOCG00000009086	nmd3	99	76.190	Amphiprion_ocellaris
MGP_PahariEiJ_G0026512	Nmd3	100	76.190	ENSAPEG00000000329	nmd3	99	76.190	Amphiprion_percula
MGP_PahariEiJ_G0026512	Nmd3	100	76.984	ENSATEG00000014351	nmd3	99	76.984	Anabas_testudineus
MGP_PahariEiJ_G0026512	Nmd3	100	78.131	ENSAPLG00000014786	NMD3	99	78.131	Anas_platyrhynchos
MGP_PahariEiJ_G0026512	Nmd3	100	81.511	ENSACAG00000007349	NMD3	99	81.511	Anolis_carolinensis
MGP_PahariEiJ_G0026512	Nmd3	99	93.574	ENSANAG00000026434	NMD3	99	93.574	Aotus_nancymaae
MGP_PahariEiJ_G0026512	Nmd3	100	77.381	ENSACLG00000015520	nmd3	99	77.381	Astatotilapia_calliptera
MGP_PahariEiJ_G0026512	Nmd3	100	76.587	ENSAMXG00000014415	nmd3	99	76.587	Astyanax_mexicanus
MGP_PahariEiJ_G0026512	Nmd3	100	92.843	ENSBTAG00000016228	NMD3	100	92.843	Bos_taurus
MGP_PahariEiJ_G0026512	Nmd3	97	51.004	WBGene00012030	T25G3.3	97	51.004	Caenorhabditis_elegans
MGP_PahariEiJ_G0026512	Nmd3	99	93.360	ENSCJAG00000002900	NMD3	97	93.360	Callithrix_jacchus
MGP_PahariEiJ_G0026512	Nmd3	99	93.360	ENSCAFG00000014352	NMD3	97	93.360	Canis_familiaris
MGP_PahariEiJ_G0026512	Nmd3	100	93.241	ENSCAFG00020021145	NMD3	99	93.241	Canis_lupus_dingo
MGP_PahariEiJ_G0026512	Nmd3	100	93.241	ENSCHIG00000016015	NMD3	100	93.241	Capra_hircus
MGP_PahariEiJ_G0026512	Nmd3	100	93.241	ENSTSYG00000002155	NMD3	99	93.241	Carlito_syrichta
MGP_PahariEiJ_G0026512	Nmd3	80	93.000	ENSCAPG00000017861	NMD3	93	93.000	Cavia_aperea
MGP_PahariEiJ_G0026512	Nmd3	100	86.842	ENSCPOG00000005953	NMD3	94	93.364	Cavia_porcellus
MGP_PahariEiJ_G0026512	Nmd3	100	93.638	ENSCCAG00000037460	NMD3	100	93.638	Cebus_capucinus
MGP_PahariEiJ_G0026512	Nmd3	100	94.632	ENSCATG00000030022	NMD3	100	94.632	Cercocebus_atys
MGP_PahariEiJ_G0026512	Nmd3	100	92.644	ENSCLAG00000003155	NMD3	100	92.644	Chinchilla_lanigera
MGP_PahariEiJ_G0026512	Nmd3	100	94.632	ENSCSAG00000012333	NMD3	100	94.632	Chlorocebus_sabaeus
MGP_PahariEiJ_G0026512	Nmd3	80	94.014	ENSCHOG00000001240	NMD3	80	94.014	Choloepus_hoffmanni
MGP_PahariEiJ_G0026512	Nmd3	100	82.704	ENSCPBG00000018318	NMD3	99	83.510	Chrysemys_picta_bellii
MGP_PahariEiJ_G0026512	Nmd3	96	53.783	ENSCING00000002129	-	96	53.783	Ciona_intestinalis
MGP_PahariEiJ_G0026512	Nmd3	87	54.422	ENSCSAVG00000001120	-	97	54.422	Ciona_savignyi
MGP_PahariEiJ_G0026512	Nmd3	99	89.243	ENSCANG00000042939	NMD3	95	89.243	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0026512	Nmd3	100	81.710	ENSCGRG00001001792	Nmd3	100	81.710	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0026512	Nmd3	97	97.546	ENSCGRG00000007947	Nmd3	98	97.546	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0026512	Nmd3	100	75.992	ENSCSEG00000017954	nmd3	99	75.992	Cynoglossus_semilaevis
MGP_PahariEiJ_G0026512	Nmd3	100	72.368	ENSCVAG00000004672	nmd3	99	69.444	Cyprinodon_variegatus
MGP_PahariEiJ_G0026512	Nmd3	100	75.446	ENSDARG00000015676	nmd3	99	75.446	Danio_rerio
MGP_PahariEiJ_G0026512	Nmd3	100	92.445	ENSDNOG00000045222	NMD3	100	92.445	Dasypus_novemcinctus
MGP_PahariEiJ_G0026512	Nmd3	100	84.211	ENSDORG00000005716	Nmd3	100	84.211	Dipodomys_ordii
MGP_PahariEiJ_G0026512	Nmd3	97	52.941	FBgn0023542	Nmd3	94	52.941	Drosophila_melanogaster
MGP_PahariEiJ_G0026512	Nmd3	100	92.105	ENSETEG00000003168	NMD3	99	80.915	Echinops_telfairi
MGP_PahariEiJ_G0026512	Nmd3	89	58.797	ENSEBUG00000014316	nmd3	97	58.797	Eptatretus_burgeri
MGP_PahariEiJ_G0026512	Nmd3	100	93.439	ENSEASG00005018672	NMD3	100	93.439	Equus_asinus_asinus
MGP_PahariEiJ_G0026512	Nmd3	99	93.964	ENSECAG00000000188	NMD3	97	93.964	Equus_caballus
MGP_PahariEiJ_G0026512	Nmd3	80	95.082	ENSEEUG00000010642	-	100	69.639	Erinaceus_europaeus
MGP_PahariEiJ_G0026512	Nmd3	100	75.198	ENSELUG00000024123	nmd3	99	75.198	Esox_lucius
MGP_PahariEiJ_G0026512	Nmd3	100	93.241	ENSFCAG00000022867	NMD3	99	93.241	Felis_catus
MGP_PahariEiJ_G0026512	Nmd3	94	81.607	ENSFALG00000008711	NMD3	99	81.607	Ficedula_albicollis
MGP_PahariEiJ_G0026512	Nmd3	100	76.316	ENSFDAG00000012197	-	99	76.162	Fukomys_damarensis
MGP_PahariEiJ_G0026512	Nmd3	99	92.231	ENSFDAG00000013724	-	99	92.231	Fukomys_damarensis
MGP_PahariEiJ_G0026512	Nmd3	100	75.198	ENSFHEG00000000415	nmd3	99	75.198	Fundulus_heteroclitus
MGP_PahariEiJ_G0026512	Nmd3	97	74.233	ENSGMOG00000009675	nmd3	99	74.233	Gadus_morhua
MGP_PahariEiJ_G0026512	Nmd3	100	80.318	ENSGALG00000009533	NMD3	99	80.318	Gallus_gallus
MGP_PahariEiJ_G0026512	Nmd3	99	75.250	ENSGAFG00000012798	nmd3	95	75.250	Gambusia_affinis
MGP_PahariEiJ_G0026512	Nmd3	100	75.397	ENSGACG00000010028	nmd3	99	75.397	Gasterosteus_aculeatus
MGP_PahariEiJ_G0026512	Nmd3	100	82.505	ENSGAGG00000006556	NMD3	99	82.505	Gopherus_agassizii
MGP_PahariEiJ_G0026512	Nmd3	100	77.632	ENSGGOG00000028590	-	99	75.896	Gorilla_gorilla
MGP_PahariEiJ_G0026512	Nmd3	100	95.030	ENSGGOG00000007157	NMD3	100	95.030	Gorilla_gorilla
MGP_PahariEiJ_G0026512	Nmd3	100	77.381	ENSHBUG00000001781	nmd3	99	77.381	Haplochromis_burtoni
MGP_PahariEiJ_G0026512	Nmd3	100	80.263	ENSHGLG00000010477	-	100	74.354	Heterocephalus_glaber_female
MGP_PahariEiJ_G0026512	Nmd3	100	93.439	ENSHGLG00000014451	-	100	93.439	Heterocephalus_glaber_female
MGP_PahariEiJ_G0026512	Nmd3	100	93.439	ENSHGLG00100006613	-	100	93.439	Heterocephalus_glaber_male
MGP_PahariEiJ_G0026512	Nmd3	100	80.263	ENSHGLG00100001042	-	100	74.751	Heterocephalus_glaber_male
MGP_PahariEiJ_G0026512	Nmd3	99	75.547	ENSHCOG00000004292	nmd3	92	75.547	Hippocampus_comes
MGP_PahariEiJ_G0026512	Nmd3	100	77.579	ENSIPUG00000005073	nmd3	99	77.579	Ictalurus_punctatus
MGP_PahariEiJ_G0026512	Nmd3	100	95.229	ENSSTOG00000001899	NMD3	100	95.229	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0026512	Nmd3	97	93.852	ENSJJAG00000019759	Nmd3	99	93.852	Jaculus_jaculus
MGP_PahariEiJ_G0026512	Nmd3	100	77.183	ENSKMAG00000020427	nmd3	99	77.183	Kryptolebias_marmoratus
MGP_PahariEiJ_G0026512	Nmd3	100	75.494	ENSLBEG00000022216	nmd3	99	75.494	Labrus_bergylta
MGP_PahariEiJ_G0026512	Nmd3	99	73.896	ENSLACG00000005731	NMD3	99	76.659	Latimeria_chalumnae
MGP_PahariEiJ_G0026512	Nmd3	100	77.778	ENSLOCG00000003561	nmd3	99	77.778	Lepisosteus_oculatus
MGP_PahariEiJ_G0026512	Nmd3	100	91.270	ENSLAFG00000007231	NMD3	100	91.270	Loxodonta_africana
MGP_PahariEiJ_G0026512	Nmd3	100	94.831	ENSMFAG00000040934	NMD3	100	94.831	Macaca_fascicularis
MGP_PahariEiJ_G0026512	Nmd3	99	94.223	ENSMMUG00000009564	NMD3	99	94.534	Macaca_mulatta
MGP_PahariEiJ_G0026512	Nmd3	100	94.831	ENSMNEG00000034626	NMD3	100	94.831	Macaca_nemestrina
MGP_PahariEiJ_G0026512	Nmd3	88	93.679	ENSMLEG00000002741	NMD3	100	93.679	Mandrillus_leucophaeus
MGP_PahariEiJ_G0026512	Nmd3	100	75.794	ENSMAMG00000012427	nmd3	99	75.794	Mastacembelus_armatus
MGP_PahariEiJ_G0026512	Nmd3	100	77.381	ENSMZEG00005016888	nmd3	99	77.381	Maylandia_zebra
MGP_PahariEiJ_G0026512	Nmd3	100	79.523	ENSMGAG00000010498	NMD3	99	79.523	Meleagris_gallopavo
MGP_PahariEiJ_G0026512	Nmd3	100	97.018	ENSMAUG00000000633	Nmd3	100	97.018	Mesocricetus_auratus
MGP_PahariEiJ_G0026512	Nmd3	100	93.439	ENSMICG00000049196	NMD3	100	93.439	Microcebus_murinus
MGP_PahariEiJ_G0026512	Nmd3	99	96.016	ENSMOCG00000005180	Nmd3	100	96.016	Microtus_ochrogaster
MGP_PahariEiJ_G0026512	Nmd3	100	76.436	ENSMMOG00000012765	nmd3	99	76.436	Mola_mola
MGP_PahariEiJ_G0026512	Nmd3	100	72.368	ENSMODG00000016296	NMD3	100	64.740	Monodelphis_domestica
MGP_PahariEiJ_G0026512	Nmd3	100	76.984	ENSMALG00000009256	nmd3	99	76.984	Monopterus_albus
MGP_PahariEiJ_G0026512	Nmd3	100	98.211	MGP_CAROLIEiJ_G0025069	Nmd3	100	98.211	Mus_caroli
MGP_PahariEiJ_G0026512	Nmd3	100	98.608	ENSMUSG00000027787	Nmd3	100	98.608	Mus_musculus
MGP_PahariEiJ_G0026512	Nmd3	100	98.410	MGP_SPRETEiJ_G0026011	Nmd3	100	98.410	Mus_spretus
MGP_PahariEiJ_G0026512	Nmd3	100	94.235	ENSMPUG00000002955	NMD3	99	94.235	Mustela_putorius_furo
MGP_PahariEiJ_G0026512	Nmd3	97	89.206	ENSMLUG00000000701	NMD3	97	89.206	Myotis_lucifugus
MGP_PahariEiJ_G0026512	Nmd3	99	96.215	ENSNGAG00000012307	Nmd3	99	96.215	Nannospalax_galili
MGP_PahariEiJ_G0026512	Nmd3	100	76.786	ENSNBRG00000003324	nmd3	99	76.786	Neolamprologus_brichardi
MGP_PahariEiJ_G0026512	Nmd3	100	94.831	ENSNLEG00000004655	NMD3	100	94.831	Nomascus_leucogenys
MGP_PahariEiJ_G0026512	Nmd3	85	66.270	ENSOPRG00000007690	-	85	66.270	Ochotona_princeps
MGP_PahariEiJ_G0026512	Nmd3	100	94.632	ENSODEG00000006270	NMD3	100	94.632	Octodon_degus
MGP_PahariEiJ_G0026512	Nmd3	100	77.778	ENSONIG00000003643	nmd3	99	77.778	Oreochromis_niloticus
MGP_PahariEiJ_G0026512	Nmd3	99	94.800	ENSOCUG00000017454	NMD3	100	94.800	Oryctolagus_cuniculus
MGP_PahariEiJ_G0026512	Nmd3	100	75.794	ENSORLG00000006279	nmd3	99	75.794	Oryzias_latipes
MGP_PahariEiJ_G0026512	Nmd3	100	75.595	ENSORLG00020003843	nmd3	99	75.595	Oryzias_latipes_hni
MGP_PahariEiJ_G0026512	Nmd3	100	75.348	ENSORLG00015006379	nmd3	99	75.348	Oryzias_latipes_hsok
MGP_PahariEiJ_G0026512	Nmd3	100	69.737	ENSORLG00015002655	-	79	63.636	Oryzias_latipes_hsok
MGP_PahariEiJ_G0026512	Nmd3	100	76.984	ENSOMEG00000012144	nmd3	99	76.984	Oryzias_melastigma
MGP_PahariEiJ_G0026512	Nmd3	100	93.042	ENSOGAG00000014910	NMD3	100	93.042	Otolemur_garnettii
MGP_PahariEiJ_G0026512	Nmd3	99	93.186	ENSOARG00000001883	NMD3	97	93.186	Ovis_aries
MGP_PahariEiJ_G0026512	Nmd3	100	94.632	ENSPPAG00000043829	NMD3	100	94.632	Pan_paniscus
MGP_PahariEiJ_G0026512	Nmd3	99	93.227	ENSPPRG00000000724	NMD3	98	93.227	Panthera_pardus
MGP_PahariEiJ_G0026512	Nmd3	100	93.042	ENSPTIG00000016761	NMD3	99	93.042	Panthera_tigris_altaica
MGP_PahariEiJ_G0026512	Nmd3	100	94.632	ENSPTRG00000015586	NMD3	100	94.632	Pan_troglodytes
MGP_PahariEiJ_G0026512	Nmd3	99	94.024	ENSPANG00000006665	NMD3	95	94.024	Papio_anubis
MGP_PahariEiJ_G0026512	Nmd3	100	75.000	ENSPKIG00000009928	nmd3	99	75.000	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0026512	Nmd3	100	82.704	ENSPSIG00000007591	NMD3	99	82.704	Pelodiscus_sinensis
MGP_PahariEiJ_G0026512	Nmd3	100	72.817	ENSPMGG00000014015	nmd3	99	72.817	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0026512	Nmd3	100	96.620	ENSPEMG00000021880	Nmd3	100	96.620	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0026512	Nmd3	100	83.101	ENSPCIG00000020869	NMD3	100	83.101	Phascolarctos_cinereus
MGP_PahariEiJ_G0026512	Nmd3	100	76.190	ENSPFOG00000012103	nmd3	99	76.190	Poecilia_formosa
MGP_PahariEiJ_G0026512	Nmd3	100	76.389	ENSPLAG00000008087	nmd3	99	76.389	Poecilia_latipinna
MGP_PahariEiJ_G0026512	Nmd3	100	76.190	ENSPMEG00000008506	nmd3	99	76.190	Poecilia_mexicana
MGP_PahariEiJ_G0026512	Nmd3	100	76.389	ENSPREG00000001848	nmd3	99	76.389	Poecilia_reticulata
MGP_PahariEiJ_G0026512	Nmd3	100	94.831	ENSPPYG00000014263	NMD3	100	94.831	Pongo_abelii
MGP_PahariEiJ_G0026512	Nmd3	100	89.474	ENSPCAG00000009851	NMD3	100	74.565	Procavia_capensis
MGP_PahariEiJ_G0026512	Nmd3	80	93.443	ENSPCOG00000012855	-	89	95.238	Propithecus_coquereli
MGP_PahariEiJ_G0026512	Nmd3	100	89.474	ENSPVAG00000003301	NMD3	85	93.277	Pteropus_vampyrus
MGP_PahariEiJ_G0026512	Nmd3	100	77.183	ENSPNYG00000006778	nmd3	99	77.183	Pundamilia_nyererei
MGP_PahariEiJ_G0026512	Nmd3	100	76.389	ENSPNAG00000009442	nmd3	99	76.389	Pygocentrus_nattereri
MGP_PahariEiJ_G0026512	Nmd3	100	96.620	ENSRNOG00000009310	Nmd3	100	96.620	Rattus_norvegicus
MGP_PahariEiJ_G0026512	Nmd3	100	90.789	ENSRBIG00000040379	NMD3	100	90.656	Rhinopithecus_bieti
MGP_PahariEiJ_G0026512	Nmd3	100	95.229	ENSRROG00000036181	NMD3	100	95.229	Rhinopithecus_roxellana
MGP_PahariEiJ_G0026512	Nmd3	99	41.954	YHR170W	NMD3	98	42.146	Saccharomyces_cerevisiae
MGP_PahariEiJ_G0026512	Nmd3	98	94.094	ENSSBOG00000024021	NMD3	98	93.902	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0026512	Nmd3	100	79.093	ENSSHAG00000016044	NMD3	100	79.093	Sarcophilus_harrisii
MGP_PahariEiJ_G0026512	Nmd3	100	75.595	ENSSFOG00015003609	nmd3	99	75.595	Scleropages_formosus
MGP_PahariEiJ_G0026512	Nmd3	100	74.206	ENSSMAG00000012887	nmd3	99	74.206	Scophthalmus_maximus
MGP_PahariEiJ_G0026512	Nmd3	100	76.786	ENSSDUG00000023721	nmd3	99	76.786	Seriola_dumerili
MGP_PahariEiJ_G0026512	Nmd3	100	76.587	ENSSLDG00000006565	nmd3	99	76.587	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0026512	Nmd3	97	93.443	ENSSARG00000010402	NMD3	99	93.443	Sorex_araneus
MGP_PahariEiJ_G0026512	Nmd3	99	81.964	ENSSPUG00000018791	NMD3	100	81.964	Sphenodon_punctatus
MGP_PahariEiJ_G0026512	Nmd3	100	76.587	ENSSPAG00000014328	nmd3	99	76.587	Stegastes_partitus
MGP_PahariEiJ_G0026512	Nmd3	100	93.837	ENSSSCG00000022952	NMD3	100	93.837	Sus_scrofa
MGP_PahariEiJ_G0026512	Nmd3	91	80.694	ENSTGUG00000015141	-	100	80.694	Taeniopygia_guttata
MGP_PahariEiJ_G0026512	Nmd3	100	80.915	ENSTGUG00000011140	-	100	80.915	Taeniopygia_guttata
MGP_PahariEiJ_G0026512	Nmd3	100	75.198	ENSTRUG00000005958	nmd3	99	75.198	Takifugu_rubripes
MGP_PahariEiJ_G0026512	Nmd3	100	86.842	ENSTBEG00000011783	-	100	67.197	Tupaia_belangeri
MGP_PahariEiJ_G0026512	Nmd3	100	88.072	ENSTTRG00000012938	NMD3	100	88.072	Tursiops_truncatus
MGP_PahariEiJ_G0026512	Nmd3	100	89.474	ENSUAMG00000009305	-	99	94.279	Ursus_americanus
MGP_PahariEiJ_G0026512	Nmd3	99	95.181	ENSUMAG00000011070	NMD3	99	95.171	Ursus_maritimus
MGP_PahariEiJ_G0026512	Nmd3	100	93.042	ENSVPAG00000008779	NMD3	100	93.042	Vicugna_pacos
MGP_PahariEiJ_G0026512	Nmd3	100	93.837	ENSVVUG00000023055	NMD3	99	94.165	Vulpes_vulpes
MGP_PahariEiJ_G0026512	Nmd3	100	81.113	ENSXETG00000027727	nmd3	99	81.113	Xenopus_tropicalis
MGP_PahariEiJ_G0026512	Nmd3	88	73.134	ENSXCOG00000012490	nmd3	87	71.963	Xiphophorus_couchianus
MGP_PahariEiJ_G0026512	Nmd3	100	76.190	ENSXMAG00000018406	nmd3	99	76.190	Xiphophorus_maculatus