EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0026595 (Gene tree)
Gene ID: 110320659
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 10939 bases
Position: chr4:78577409-78588347
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0069305	G-patch	PF01585.23	3.3e-09	1	1
MGP_PahariEiJ_P0069302	G-patch	PF01585.23	4.8e-09	1	1
MGP_PahariEiJ_P0069303	G-patch	PF01585.23	4.8e-09	1	1
MGP_PahariEiJ_P0069306	G-patch	PF01585.23	4.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0069303	-	1627	-	MGP_PahariEiJ_P0069303	414 (aa)	-	-
MGP_PahariEiJ_T0069302	-	1764	-	MGP_PahariEiJ_P0069302	414 (aa)	-	-
MGP_PahariEiJ_T0069306	-	2203	-	MGP_PahariEiJ_P0069306	414 (aa)	-	-
MGP_PahariEiJ_T0069305	-	958	-	MGP_PahariEiJ_P0069305	239 (aa)	-	-
MGP_PahariEiJ_T0069304	-	737	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0026595's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0026595's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0026595	-	82	82.564	ENSG00000160818	GPATCH4	95	85.841	Homo_sapiens
MGP_PahariEiJ_G0026595	-	87	43.750	ENSAPOG00000008436	gpatch4	51	47.525	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0026595	-	82	85.128	ENSAMEG00000014829	GPATCH4	82	64.286	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0026595	-	51	47.581	ENSACIG00000017309	-	63	59.740	Amphilophus_citrinellus
MGP_PahariEiJ_G0026595	-	87	43.556	ENSAOCG00000015494	gpatch4	54	44.651	Amphiprion_ocellaris
MGP_PahariEiJ_G0026595	-	90	42.672	ENSAPEG00000022243	gpatch4	54	44.651	Amphiprion_percula
MGP_PahariEiJ_G0026595	-	84	45.872	ENSATEG00000006359	gpatch4	50	46.330	Anabas_testudineus
MGP_PahariEiJ_G0026595	-	97	74.468	ENSANAG00000035354	GPATCH4	63	74.684	Aotus_nancymaae
MGP_PahariEiJ_G0026595	-	82	43.498	ENSACLG00000010456	gpatch4	58	52.525	Astatotilapia_calliptera
MGP_PahariEiJ_G0026595	-	99	78.151	ENSBTAG00000000406	GPATCH4	86	65.000	Bos_taurus
MGP_PahariEiJ_G0026595	-	97	77.586	ENSCJAG00000006048	GPATCH4	92	84.821	Callithrix_jacchus
MGP_PahariEiJ_G0026595	-	51	81.818	ENSCJAG00000031662	-	84	81.818	Callithrix_jacchus
MGP_PahariEiJ_G0026595	-	82	82.564	ENSCHIG00000021295	GPATCH4	86	63.231	Capra_hircus
MGP_PahariEiJ_G0026595	-	98	78.723	ENSCCAG00000036114	GPATCH4	92	84.821	Cebus_capucinus
MGP_PahariEiJ_G0026595	-	84	81.000	ENSCATG00000042152	GPATCH4	82	82.051	Cercocebus_atys
MGP_PahariEiJ_G0026595	-	99	79.498	ENSCLAG00000002967	-	56	79.668	Chinchilla_lanigera
MGP_PahariEiJ_G0026595	-	84	81.000	ENSCSAG00000002161	GPATCH4	91	58.458	Chlorocebus_sabaeus
MGP_PahariEiJ_G0026595	-	77	52.041	ENSCPBG00000025803	GPATCH4	64	52.551	Chrysemys_picta_bellii
MGP_PahariEiJ_G0026595	-	69	41.279	ENSCING00000004717	-	71	41.361	Ciona_intestinalis
MGP_PahariEiJ_G0026595	-	66	43.636	ENSCSAVG00000003297	-	64	43.114	Ciona_savignyi
MGP_PahariEiJ_G0026595	-	84	80.500	ENSCANG00000030031	GPATCH4	82	82.906	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0026595	-	99	91.597	ENSCGRG00001016898	Gpatch4	97	79.146	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0026595	-	99	91.597	ENSCGRG00000008399	Gpatch4	97	79.146	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0026595	-	74	44.865	ENSCSEG00000012030	gpatch4	55	46.486	Cynoglossus_semilaevis
MGP_PahariEiJ_G0026595	-	77	46.269	ENSDARG00000091931	gpatch4	69	47.727	Danio_rerio
MGP_PahariEiJ_G0026595	-	99	77.119	ENSDNOG00000034673	GPATCH4	78	65.903	Dasypus_novemcinctus
MGP_PahariEiJ_G0026595	-	56	72.180	ENSDORG00000011332	-	87	72.180	Dipodomys_ordii
MGP_PahariEiJ_G0026595	-	73	38.974	FBgn0039829	CG15561	54	38.974	Drosophila_melanogaster
MGP_PahariEiJ_G0026595	-	65	44.048	ENSEBUG00000006498	-	55	44.118	Eptatretus_burgeri
MGP_PahariEiJ_G0026595	-	100	79.498	ENSEASG00005018284	GPATCH4	93	55.765	Equus_asinus_asinus
MGP_PahariEiJ_G0026595	-	98	79.487	ENSECAG00000011135	GPATCH4	93	57.869	Equus_caballus
MGP_PahariEiJ_G0026595	-	98	76.068	ENSFCAG00000006554	GPATCH4	91	63.988	Felis_catus
MGP_PahariEiJ_G0026595	-	95	42.570	ENSFHEG00000003097	gpatch4	56	45.581	Fundulus_heteroclitus
MGP_PahariEiJ_G0026595	-	80	44.878	ENSGALG00000048365	GPATCH4	56	44.878	Gallus_gallus
MGP_PahariEiJ_G0026595	-	84	43.541	ENSGAFG00000021732	gpatch4	69	43.541	Gambusia_affinis
MGP_PahariEiJ_G0026595	-	77	47.000	ENSGACG00000013318	gpatch4	60	48.500	Gasterosteus_aculeatus
MGP_PahariEiJ_G0026595	-	77	52.041	ENSGAGG00000020710	GPATCH4	64	52.551	Gopherus_agassizii
MGP_PahariEiJ_G0026595	-	98	77.447	ENSGGOG00000000753	GPATCH4	82	82.906	Gorilla_gorilla
MGP_PahariEiJ_G0026595	-	82	43.498	ENSHBUG00000009675	gpatch4	57	52.525	Haplochromis_burtoni
MGP_PahariEiJ_G0026595	-	95	42.797	ENSHCOG00000007016	gpatch4	56	45.596	Hippocampus_comes
MGP_PahariEiJ_G0026595	-	85	46.544	ENSIPUG00000006348	gpatch4	71	45.238	Ictalurus_punctatus
MGP_PahariEiJ_G0026595	-	99	74.576	ENSSTOG00000020510	GPATCH4	89	83.761	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0026595	-	84	42.308	ENSKMAG00000015765	gpatch4	59	45.291	Kryptolebias_marmoratus
MGP_PahariEiJ_G0026595	-	81	44.186	ENSLBEG00000009364	-	65	46.047	Labrus_bergylta
MGP_PahariEiJ_G0026595	-	82	48.792	ENSLACG00000009700	GPATCH4	60	48.792	Latimeria_chalumnae
MGP_PahariEiJ_G0026595	-	86	41.964	ENSLOCG00000008820	gpatch4	61	43.662	Lepisosteus_oculatus
MGP_PahariEiJ_G0026595	-	100	60.251	ENSLAFG00000028327	-	96	48.522	Loxodonta_africana
MGP_PahariEiJ_G0026595	-	81	81.443	ENSMFAG00000030965	GPATCH4	82	82.051	Macaca_fascicularis
MGP_PahariEiJ_G0026595	-	84	81.500	ENSMMUG00000002624	GPATCH4	82	82.906	Macaca_mulatta
MGP_PahariEiJ_G0026595	-	83	80.303	ENSMNEG00000028844	GPATCH4	82	82.051	Macaca_nemestrina
MGP_PahariEiJ_G0026595	-	83	79.798	ENSMLEG00000037909	GPATCH4	82	81.197	Mandrillus_leucophaeus
MGP_PahariEiJ_G0026595	-	82	42.411	ENSMZEG00005017452	gpatch4	55	46.226	Maylandia_zebra
MGP_PahariEiJ_G0026595	-	68	72.222	ENSMICG00000034025	-	93	74.775	Microcebus_murinus
MGP_PahariEiJ_G0026595	-	97	78.112	ENSMICG00000013624	GPATCH4	93	68.103	Microcebus_murinus
MGP_PahariEiJ_G0026595	-	75	65.922	ENSMICG00000038615	-	95	62.698	Microcebus_murinus
MGP_PahariEiJ_G0026595	-	88	44.737	ENSMMOG00000017095	gpatch4	96	49.533	Mola_mola
MGP_PahariEiJ_G0026595	-	81	59.184	ENSMODG00000014154	-	96	59.184	Monodelphis_domestica
MGP_PahariEiJ_G0026595	-	99	59.336	ENSMODG00000016818	-	67	65.263	Monodelphis_domestica
MGP_PahariEiJ_G0026595	-	87	44.248	ENSMALG00000003793	gpatch4	50	46.411	Monopterus_albus
MGP_PahariEiJ_G0026595	-	100	98.326	MGP_CAROLIEiJ_G0025152	Gpatch4	100	98.326	Mus_caroli
MGP_PahariEiJ_G0026595	-	99	95.798	ENSMUSG00000028069	Gpatch4	99	95.798	Mus_musculus
MGP_PahariEiJ_G0026595	-	99	96.218	MGP_SPRETEiJ_G0026093	Gpatch4	99	96.218	Mus_spretus
MGP_PahariEiJ_G0026595	-	100	76.569	ENSMLUG00000009571	GPATCH4	92	59.413	Myotis_lucifugus
MGP_PahariEiJ_G0026595	-	51	77.049	ENSNGAG00000019958	-	92	77.049	Nannospalax_galili
MGP_PahariEiJ_G0026595	-	93	78.475	ENSNLEG00000027678	GPATCH4	82	69.055	Nomascus_leucogenys
MGP_PahariEiJ_G0026595	-	99	52.521	ENSMEUG00000006861	-	69	59.358	Notamacropus_eugenii
MGP_PahariEiJ_G0026595	-	99	72.152	ENSOPRG00000000586	GPATCH4	55	71.967	Ochotona_princeps
MGP_PahariEiJ_G0026595	-	77	44.340	ENSONIG00000002261	gpatch4	51	47.264	Oreochromis_niloticus
MGP_PahariEiJ_G0026595	-	80	82.292	ENSOCUG00000025781	-	100	54.875	Oryctolagus_cuniculus
MGP_PahariEiJ_G0026595	-	82	43.128	ENSORLG00020013892	gpatch4	59	44.860	Oryzias_latipes_hni
MGP_PahariEiJ_G0026595	-	85	41.704	ENSORLG00015019725	gpatch4	60	44.860	Oryzias_latipes_hsok
MGP_PahariEiJ_G0026595	-	82	39.796	ENSOMEG00000000529	gpatch4	53	39.796	Oryzias_melastigma
MGP_PahariEiJ_G0026595	-	82	83.673	ENSOGAG00000006698	-	81	66.761	Otolemur_garnettii
MGP_PahariEiJ_G0026595	-	99	78.903	ENSOARG00000006123	GPATCH4	86	65.278	Ovis_aries
MGP_PahariEiJ_G0026595	-	79	83.684	ENSPPAG00000028364	-	82	82.906	Pan_paniscus
MGP_PahariEiJ_G0026595	-	98	75.641	ENSPPRG00000002106	GPATCH4	54	80.711	Panthera_pardus
MGP_PahariEiJ_G0026595	-	100	75.732	ENSPTIG00000006717	GPATCH4	79	85.586	Panthera_tigris_altaica
MGP_PahariEiJ_G0026595	-	79	83.684	ENSPTRG00000001464	GPATCH4	82	82.906	Pan_troglodytes
MGP_PahariEiJ_G0026595	-	83	80.808	ENSPANG00000018543	GPATCH4	82	82.906	Papio_anubis
MGP_PahariEiJ_G0026595	-	84	53.110	ENSPSIG00000011317	GPATCH4	74	50.935	Pelodiscus_sinensis
MGP_PahariEiJ_G0026595	-	85	45.045	ENSPMAG00000009175	gpatch4	67	46.939	Petromyzon_marinus
MGP_PahariEiJ_G0026595	-	84	43.578	ENSPFOG00000011835	gpatch4	56	43.578	Poecilia_formosa
MGP_PahariEiJ_G0026595	-	84	43.119	ENSPLAG00000019504	gpatch4	56	43.119	Poecilia_latipinna
MGP_PahariEiJ_G0026595	-	84	43.578	ENSPMEG00000001375	gpatch4	57	43.578	Poecilia_mexicana
MGP_PahariEiJ_G0026595	-	84	41.743	ENSPREG00000017029	gpatch4	59	42.661	Poecilia_reticulata
MGP_PahariEiJ_G0026595	-	95	78.947	ENSPPYG00000000711	-	70	69.010	Pongo_abelii
MGP_PahariEiJ_G0026595	-	66	82.803	ENSPCOG00000023130	-	76	84.821	Propithecus_coquereli
MGP_PahariEiJ_G0026595	-	67	75.155	ENSPCOG00000013948	-	89	73.810	Propithecus_coquereli
MGP_PahariEiJ_G0026595	-	91	76.959	ENSPVAG00000007505	-	51	77.723	Pteropus_vampyrus
MGP_PahariEiJ_G0026595	-	82	43.498	ENSPNYG00000018461	gpatch4	54	46.226	Pundamilia_nyererei
MGP_PahariEiJ_G0026595	-	100	96.653	ENSRNOG00000018969	Gpatch4	97	89.620	Rattus_norvegicus
MGP_PahariEiJ_G0026595	-	84	81.500	ENSRBIG00000005742	GPATCH4	82	82.051	Rhinopithecus_bieti
MGP_PahariEiJ_G0026595	-	84	81.500	ENSRROG00000044157	GPATCH4	82	82.051	Rhinopithecus_roxellana
MGP_PahariEiJ_G0026595	-	100	78.750	ENSSBOG00000024840	GPATCH4	53	78.750	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0026595	-	99	56.904	ENSSHAG00000015436	-	98	52.083	Sarcophilus_harrisii
MGP_PahariEiJ_G0026595	-	77	44.608	ENSSDUG00000006583	gpatch4	53	47.032	Seriola_dumerili
MGP_PahariEiJ_G0026595	-	77	44.608	ENSSLDG00000012365	gpatch4	53	47.032	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0026595	-	78	52.284	ENSSPUG00000002674	GPATCH4	66	52.792	Sphenodon_punctatus
MGP_PahariEiJ_G0026595	-	87	41.850	ENSSPAG00000011683	gpatch4	51	44.878	Stegastes_partitus
MGP_PahariEiJ_G0026595	-	99	76.891	ENSSSCG00000006481	GPATCH4	91	62.129	Sus_scrofa
MGP_PahariEiJ_G0026595	-	75	44.828	ENSTNIG00000005156	gpatch4	69	46.500	Tetraodon_nigroviridis
MGP_PahariEiJ_G0026595	-	99	78.481	ENSTTRG00000001113	GPATCH4	83	67.359	Tursiops_truncatus
MGP_PahariEiJ_G0026595	-	82	84.615	ENSUAMG00000013407	GPATCH4	75	64.881	Ursus_americanus
MGP_PahariEiJ_G0026595	-	82	73.214	ENSVVUG00000006004	-	84	83.186	Vulpes_vulpes
MGP_PahariEiJ_G0026595	-	95	42.149	ENSXETG00000020397	gpatch4	75	40.329	Xenopus_tropicalis
MGP_PahariEiJ_G0026595	-	92	41.880	ENSXCOG00000003911	gpatch4	57	43.925	Xiphophorus_couchianus
MGP_PahariEiJ_G0026595	-	92	41.176	ENSXMAG00000024520	gpatch4	57	43.119	Xiphophorus_maculatus