EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
MGP_PahariEiJ_G0026606 (Gene tree)
Gene ID
110319882
Gene Symbol
Smg5
Alias
-
Full Name
SMG5%2C nonsense mediated mRNA decay factor
Gene Type
protein_coding
Species
Mus_pahari
Status
putative
Strand
Plus strand
Length
26730 bases
Position
chr4:78860191-78886920
Accession
110319882
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_PahariEiJ_P0069347EST1PF10374.91.4e-2311
MGP_PahariEiJ_P0069347EST1_DNA_bindPF10373.91.2e-4012
MGP_PahariEiJ_P0069347EST1_DNA_bindPF10373.91.2e-4022
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_PahariEiJ_T0069350-765--- (aa)--
MGP_PahariEiJ_T0069351-1010-MGP_PahariEiJ_P0069351179 (aa)--
MGP_PahariEiJ_T0069352-714--- (aa)--
MGP_PahariEiJ_T0069353-772--- (aa)--
MGP_PahariEiJ_T0069354-833--- (aa)--
MGP_PahariEiJ_T0069355-427--- (aa)--
MGP_PahariEiJ_T0069349-741--- (aa)--
MGP_PahariEiJ_T0069348-3075--- (aa)--
MGP_PahariEiJ_T0069347-4435XM_021195550MGP_PahariEiJ_P00693471019 (aa)XP_021051209UPI000A3110F7
Gene Model
Click here to download MGP_PahariEiJ_G0026606's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0026606's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_PahariEiJ_G0026606Smg510098.883ENSG00000198952SMG510092.345Homo_sapiens
MGP_PahariEiJ_G0026606Smg510088.827ENSAPOG00000019690smg59967.092Acanthochromis_polyacanthus
MGP_PahariEiJ_G0026606Smg510097.765ENSAMEG00000014458SMG510088.554Ailuropoda_melanoleuca
MGP_PahariEiJ_G0026606Smg510088.827ENSACIG00000001353smg59965.835Amphilophus_citrinellus
MGP_PahariEiJ_G0026606Smg510088.827ENSAOCG00000019483smg59960.893Amphiprion_ocellaris
MGP_PahariEiJ_G0026606Smg510088.827ENSAPEG00000022949smg59866.302Amphiprion_percula
MGP_PahariEiJ_G0026606Smg510089.385ENSATEG00000005348smg59966.245Anabas_testudineus
MGP_PahariEiJ_G0026606Smg510096.648ENSAPLG00000010263SMG510077.313Anas_platyrhynchos
MGP_PahariEiJ_G0026606Smg510098.883ENSANAG00000032899SMG510092.051Aotus_nancymaae
MGP_PahariEiJ_G0026606Smg510088.827ENSACLG00000009311smg59966.763Astatotilapia_calliptera
MGP_PahariEiJ_G0026606Smg510088.827ENSAMXG00000024616smg59962.976Astyanax_mexicanus
MGP_PahariEiJ_G0026606Smg510058.011ENSBTAG00000021747-9943.503Bos_taurus
MGP_PahariEiJ_G0026606Smg510098.883ENSBTAG00000009435SMG510091.364Bos_taurus
MGP_PahariEiJ_G0026606Smg510098.883ENSCJAG00000005684SMG510091.953Callithrix_jacchus
MGP_PahariEiJ_G0026606Smg510098.324ENSCAFG00000016839SMG510090.579Canis_familiaris
MGP_PahariEiJ_G0026606Smg510098.324ENSCAFG00020006061SMG510090.579Canis_lupus_dingo
MGP_PahariEiJ_G0026606Smg510098.883ENSCHIG00000007709SMG510091.266Capra_hircus
MGP_PahariEiJ_G0026606Smg510057.459ENSCHIG00000006323-9943.427Capra_hircus
MGP_PahariEiJ_G0026606Smg510098.883ENSTSYG00000004099SMG510091.471Carlito_syrichta
MGP_PahariEiJ_G0026606Smg59771.226ENSCAPG00000003631SMG510072.199Cavia_aperea
MGP_PahariEiJ_G0026606Smg510097.765ENSCPOG00000015696SMG510091.658Cavia_porcellus
MGP_PahariEiJ_G0026606Smg510098.883ENSCCAG00000027409SMG510091.658Cebus_capucinus
MGP_PahariEiJ_G0026606Smg510098.883ENSCATG00000030539SMG510092.542Cercocebus_atys
MGP_PahariEiJ_G0026606Smg510098.324ENSCLAG00000003983SMG510092.345Chinchilla_lanigera
MGP_PahariEiJ_G0026606Smg510098.883ENSCSAG00000002120SMG510092.444Chlorocebus_sabaeus
MGP_PahariEiJ_G0026606Smg510080.447ENSCHOG00000008741-5790.876Choloepus_hoffmanni
MGP_PahariEiJ_G0026606Smg59696.491ENSCPBG00000025848SMG510077.383Chrysemys_picta_bellii
MGP_PahariEiJ_G0026606Smg510043.646ENSCING00000008706-9934.867Ciona_intestinalis
MGP_PahariEiJ_G0026606Smg510098.883ENSCANG00000029208SMG510088.322Colobus_angolensis_palliatus
MGP_PahariEiJ_G0026606Smg510098.883ENSCGRG00001006336Smg510097.350Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0026606Smg510057.778ENSCGRG00001000584-7454.703Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0026606Smg510057.778ENSCGRG00000009566-8854.455Cricetulus_griseus_crigri
MGP_PahariEiJ_G0026606Smg510098.883ENSCGRG00000005111Smg510097.384Cricetulus_griseus_crigri
MGP_PahariEiJ_G0026606Smg510088.827ENSCSEG00000014220smg59965.656Cynoglossus_semilaevis
MGP_PahariEiJ_G0026606Smg510065.922ENSCVAG00000000529smg59960.976Cyprinodon_variegatus
MGP_PahariEiJ_G0026606Smg510088.827ENSDARG00000041481smg59963.975Danio_rerio
MGP_PahariEiJ_G0026606Smg510098.883ENSDNOG00000000051SMG510088.027Dasypus_novemcinctus
MGP_PahariEiJ_G0026606Smg59944.444ENSDNOG00000039862-10035.450Dasypus_novemcinctus
MGP_PahariEiJ_G0026606Smg510098.883ENSDORG00000010382Smg510090.882Dipodomys_ordii
MGP_PahariEiJ_G0026606Smg56633.962FBgn0019890Smg56233.962Drosophila_melanogaster
MGP_PahariEiJ_G0026606Smg510098.883ENSETEG00000010336SMG59193.204Echinops_telfairi
MGP_PahariEiJ_G0026606Smg510065.363ENSEBUG00000003739smg59847.352Eptatretus_burgeri
MGP_PahariEiJ_G0026606Smg510098.883ENSEASG00005019122SMG510091.462Equus_asinus_asinus
MGP_PahariEiJ_G0026606Smg510098.883ENSECAG00000001389SMG510091.462Equus_caballus
MGP_PahariEiJ_G0026606Smg510098.883ENSEEUG00000012690SMG57496.542Erinaceus_europaeus
MGP_PahariEiJ_G0026606Smg510088.268ENSELUG00000012585smg59964.995Esox_lucius
MGP_PahariEiJ_G0026606Smg510098.324ENSFCAG00000011783SMG510090.196Felis_catus
MGP_PahariEiJ_G0026606Smg510095.580ENSFALG00000001166-9979.700Ficedula_albicollis
MGP_PahariEiJ_G0026606Smg510099.441ENSFDAG00000017388SMG510089.839Fukomys_damarensis
MGP_PahariEiJ_G0026606Smg510088.827ENSFHEG00000013939smg510062.173Fundulus_heteroclitus
MGP_PahariEiJ_G0026606Smg510089.385ENSGMOG00000007310smg59960.862Gadus_morhua
MGP_PahariEiJ_G0026606Smg510096.648ENSGALG00000029918-10077.091Gallus_gallus
MGP_PahariEiJ_G0026606Smg510088.827ENSGAFG00000021691smg59668.371Gambusia_affinis
MGP_PahariEiJ_G0026606Smg510088.827ENSGACG00000013142smg59962.726Gasterosteus_aculeatus
MGP_PahariEiJ_G0026606Smg510096.648ENSGAGG00000016131SMG510078.538Gopherus_agassizii
MGP_PahariEiJ_G0026606Smg510098.883ENSGGOG00000010932SMG510092.051Gorilla_gorilla
MGP_PahariEiJ_G0026606Smg510088.827ENSHBUG00000008654smg59965.810Haplochromis_burtoni
MGP_PahariEiJ_G0026606Smg510098.324ENSHGLG00000019152SMG510089.500Heterocephalus_glaber_female
MGP_PahariEiJ_G0026606Smg510097.765ENSHGLG00100015948SMG59989.583Heterocephalus_glaber_male
MGP_PahariEiJ_G0026606Smg510080.556ENSHCOG00000010229smg59272.289Hippocampus_comes
MGP_PahariEiJ_G0026606Smg510089.385ENSIPUG00000006624Smg59962.682Ictalurus_punctatus
MGP_PahariEiJ_G0026606Smg510098.883ENSSTOG00000001780SMG510092.836Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0026606Smg510098.883ENSJJAG00000022763Smg510091.961Jaculus_jaculus
MGP_PahariEiJ_G0026606Smg510089.385ENSKMAG00000014586smg59960.160Kryptolebias_marmoratus
MGP_PahariEiJ_G0026606Smg510088.827ENSLBEG00000002145smg59966.025Labrus_bergylta
MGP_PahariEiJ_G0026606Smg510088.827ENSLACG00000010521SMG510064.171Latimeria_chalumnae
MGP_PahariEiJ_G0026606Smg510088.268ENSLOCG00000008380smg59960.823Lepisosteus_oculatus
MGP_PahariEiJ_G0026606Smg510098.883ENSLAFG00000006241SMG510089.794Loxodonta_africana
MGP_PahariEiJ_G0026606Smg510098.883ENSMFAG00000045357SMG510092.444Macaca_fascicularis
MGP_PahariEiJ_G0026606Smg510098.883ENSMMUG00000000090SMG510092.444Macaca_mulatta
MGP_PahariEiJ_G0026606Smg510098.883ENSMNEG00000044425SMG510092.345Macaca_nemestrina
MGP_PahariEiJ_G0026606Smg510086.706ENSMLEG00000041192SMG510086.217Mandrillus_leucophaeus
MGP_PahariEiJ_G0026606Smg510088.827ENSMAMG00000010683smg510060.491Mastacembelus_armatus
MGP_PahariEiJ_G0026606Smg510088.827ENSMZEG00005015815smg59965.230Maylandia_zebra
MGP_PahariEiJ_G0026606Smg56359.036ENSMZEG00005016543smg510059.910Maylandia_zebra
MGP_PahariEiJ_G0026606Smg57364.286ENSMGAG00000017349-10061.278Meleagris_gallopavo
MGP_PahariEiJ_G0026606Smg510097.765ENSMAUG00000010381Smg510096.075Mesocricetus_auratus
MGP_PahariEiJ_G0026606Smg59858.523ENSMAUG00000000043-9643.523Mesocricetus_auratus
MGP_PahariEiJ_G0026606Smg510098.883ENSMICG00000002257SMG510092.934Microcebus_murinus
MGP_PahariEiJ_G0026606Smg510058.333ENSMOCG00000008423-7154.321Microtus_ochrogaster
MGP_PahariEiJ_G0026606Smg510098.883ENSMOCG00000016590Smg510095.984Microtus_ochrogaster
MGP_PahariEiJ_G0026606Smg510081.006ENSMMOG00000017199smg59960.000Mola_mola
MGP_PahariEiJ_G0026606Smg59838.286ENSMODG00000004511-9934.113Monodelphis_domestica
MGP_PahariEiJ_G0026606Smg59835.429ENSMODG00000004735-8640.107Monodelphis_domestica
MGP_PahariEiJ_G0026606Smg59836.932ENSMODG00000021488-9935.062Monodelphis_domestica
MGP_PahariEiJ_G0026606Smg510098.324ENSMODG00000016901SMG59886.629Monodelphis_domestica
MGP_PahariEiJ_G0026606Smg59838.857ENSMODG00000004532-9237.561Monodelphis_domestica
MGP_PahariEiJ_G0026606Smg59836.932ENSMODG00000010675-8537.760Monodelphis_domestica
MGP_PahariEiJ_G0026606Smg510084.358ENSMALG00000010375smg59960.320Monopterus_albus
MGP_PahariEiJ_G0026606Smg510098.883MGP_CAROLIEiJ_G0025163Smg510098.883Mus_caroli
MGP_PahariEiJ_G0026606Smg510098.883ENSMUSG00000001415Smg510098.528Mus_musculus
MGP_PahariEiJ_G0026606Smg510098.883MGP_SPRETEiJ_G0026104Smg510098.883Mus_spretus
MGP_PahariEiJ_G0026606Smg59696.491ENSMPUG00000004546SMG510088.353Mustela_putorius_furo
MGP_PahariEiJ_G0026606Smg510098.883ENSMLUG00000008518SMG510091.300Myotis_lucifugus
MGP_PahariEiJ_G0026606Smg510057.222ENSNGAG00000012101-9843.688Nannospalax_galili
MGP_PahariEiJ_G0026606Smg510098.883ENSNGAG00000020706Smg510093.131Nannospalax_galili
MGP_PahariEiJ_G0026606Smg510088.827ENSNBRG00000004332smg59864.286Neolamprologus_brichardi
MGP_PahariEiJ_G0026606Smg510098.324ENSNLEG00000012439SMG510091.953Nomascus_leucogenys
MGP_PahariEiJ_G0026606Smg510098.324ENSMEUG00000012834SMG510084.789Notamacropus_eugenii
MGP_PahariEiJ_G0026606Smg510098.883ENSOPRG00000009152SMG510090.383Ochotona_princeps
MGP_PahariEiJ_G0026606Smg510098.883ENSODEG00000012237SMG510091.560Octodon_degus
MGP_PahariEiJ_G0026606Smg510088.827ENSONIG00000008632smg59962.210Oreochromis_niloticus
MGP_PahariEiJ_G0026606Smg59953.371ENSOCUG00000023338-9940.131Oryctolagus_cuniculus
MGP_PahariEiJ_G0026606Smg510098.883ENSOCUG00000012886SMG510091.759Oryctolagus_cuniculus
MGP_PahariEiJ_G0026606Smg510088.827ENSORLG00000016239smg59961.844Oryzias_latipes
MGP_PahariEiJ_G0026606Smg510088.827ENSORLG00020013127smg59965.527Oryzias_latipes_hni
MGP_PahariEiJ_G0026606Smg510088.827ENSORLG00015019014smg59965.336Oryzias_latipes_hsok
MGP_PahariEiJ_G0026606Smg510088.827ENSOMEG00000021330smg59260.432Oryzias_melastigma
MGP_PahariEiJ_G0026606Smg510098.324ENSOGAG00000004966SMG510091.364Otolemur_garnettii
MGP_PahariEiJ_G0026606Smg510057.692ENSOARG00000011963-9943.689Ovis_aries
MGP_PahariEiJ_G0026606Smg510098.883ENSOARG00000005778SMG510091.364Ovis_aries
MGP_PahariEiJ_G0026606Smg510098.883ENSPPAG00000011996SMG510092.051Pan_paniscus
MGP_PahariEiJ_G0026606Smg510098.324ENSPPRG00000011901SMG510090.050Panthera_pardus
MGP_PahariEiJ_G0026606Smg510093.296ENSPTIG00000007892SMG59883.030Panthera_tigris_altaica
MGP_PahariEiJ_G0026606Smg510098.883ENSPTRG00000023925SMG510092.247Pan_troglodytes
MGP_PahariEiJ_G0026606Smg510098.883ENSPTRG00000049282-10092.247Pan_troglodytes
MGP_PahariEiJ_G0026606Smg510098.883ENSPANG00000011201SMG510092.542Papio_anubis
MGP_PahariEiJ_G0026606Smg510089.385ENSPKIG00000009402smg59966.375Paramormyrops_kingsleyae
MGP_PahariEiJ_G0026606Smg510096.648ENSPSIG00000015198SMG510079.146Pelodiscus_sinensis
MGP_PahariEiJ_G0026606Smg510084.358ENSPMGG00000010465smg59960.609Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0026606Smg510057.222ENSPEMG00000010022-9544.599Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0026606Smg510098.883ENSPEMG00000001819Smg510097.056Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0026606Smg510071.508ENSPMAG00000000410smg510050.474Petromyzon_marinus
MGP_PahariEiJ_G0026606Smg510098.324ENSPCIG00000018938SMG510086.275Phascolarctos_cinereus
MGP_PahariEiJ_G0026606Smg510088.827ENSPFOG00000010191smg59962.230Poecilia_formosa
MGP_PahariEiJ_G0026606Smg510088.827ENSPLAG00000009332smg59962.320Poecilia_latipinna
MGP_PahariEiJ_G0026606Smg510088.827ENSPMEG00000014105smg59965.673Poecilia_mexicana
MGP_PahariEiJ_G0026606Smg510088.827ENSPREG00000017713smg59962.500Poecilia_reticulata
MGP_PahariEiJ_G0026606Smg510098.883ENSPPYG00000000723SMG510092.247Pongo_abelii
MGP_PahariEiJ_G0026606Smg510098.324ENSPCAG00000008412SMG58195.028Procavia_capensis
MGP_PahariEiJ_G0026606Smg510098.883ENSPCOG00000004741SMG510092.640Propithecus_coquereli
MGP_PahariEiJ_G0026606Smg510081.943ENSPVAG00000016748SMG510082.532Pteropus_vampyrus
MGP_PahariEiJ_G0026606Smg510088.268ENSPNYG00000013397smg59961.313Pundamilia_nyererei
MGP_PahariEiJ_G0026606Smg510088.827ENSPNAG00000028363smg59962.329Pygocentrus_nattereri
MGP_PahariEiJ_G0026606Smg510098.324ENSRNOG00000019590Smg510098.135Rattus_norvegicus
MGP_PahariEiJ_G0026606Smg510098.883ENSRBIG00000027428SMG510092.247Rhinopithecus_bieti
MGP_PahariEiJ_G0026606Smg510098.883ENSRROG00000030035SMG510092.149Rhinopithecus_roxellana
MGP_PahariEiJ_G0026606Smg510098.883ENSSBOG00000033339SMG510091.953Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0026606Smg59940.678ENSSHAG00000000935-9240.244Sarcophilus_harrisii
MGP_PahariEiJ_G0026606Smg59941.808ENSSHAG00000000561-8639.633Sarcophilus_harrisii
MGP_PahariEiJ_G0026606Smg510098.324ENSSHAG00000014163SMG510085.415Sarcophilus_harrisii
MGP_PahariEiJ_G0026606Smg59944.633ENSSHAG00000009572-7942.356Sarcophilus_harrisii
MGP_PahariEiJ_G0026606Smg510087.709ENSSFOG00015024175smg59965.347Scleropages_formosus
MGP_PahariEiJ_G0026606Smg510088.827ENSSMAG00000013059smg59961.477Scophthalmus_maximus
MGP_PahariEiJ_G0026606Smg510088.827ENSSDUG00000007122smg59961.757Seriola_dumerili
MGP_PahariEiJ_G0026606Smg510088.827ENSSLDG00000011418smg59962.066Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0026606Smg59077.935ENSSARG00000012484SMG510077.174Sorex_araneus
MGP_PahariEiJ_G0026606Smg59695.906ENSSPUG00000002260SMG510076.542Sphenodon_punctatus
MGP_PahariEiJ_G0026606Smg510089.385ENSSPAG00000014266smg59865.150Stegastes_partitus
MGP_PahariEiJ_G0026606Smg58841.250ENSSSCG00000037182-8535.795Sus_scrofa
MGP_PahariEiJ_G0026606Smg59978.090ENSSSCG00000039308-10071.415Sus_scrofa
MGP_PahariEiJ_G0026606Smg510098.883ENSSSCG00000006490-10092.760Sus_scrofa
MGP_PahariEiJ_G0026606Smg510095.028ENSTGUG00000003748-10079.357Taeniopygia_guttata
MGP_PahariEiJ_G0026606Smg510088.827ENSTRUG00000012580smg59964.763Takifugu_rubripes
MGP_PahariEiJ_G0026606Smg510088.268ENSTNIG00000010303smg59965.116Tetraodon_nigroviridis
MGP_PahariEiJ_G0026606Smg57798.551ENSTBEG00000002777SMG55798.522Tupaia_belangeri
MGP_PahariEiJ_G0026606Smg510098.324ENSTTRG00000001401SMG510086.850Tursiops_truncatus
MGP_PahariEiJ_G0026606Smg510097.765ENSUAMG00000013721SMG510089.303Ursus_americanus
MGP_PahariEiJ_G0026606Smg510092.179ENSUMAG00000018041SMG59784.970Ursus_maritimus
MGP_PahariEiJ_G0026606Smg59882.696ENSVPAG00000009446SMG59982.193Vicugna_pacos
MGP_PahariEiJ_G0026606Smg510098.324ENSVVUG00000005887SMG510090.481Vulpes_vulpes
MGP_PahariEiJ_G0026606Smg57764.780ENSXETG00000033791SMG59964.403Xenopus_tropicalis
MGP_PahariEiJ_G0026606Smg510088.827ENSXCOG00000004379smg59670.330Xiphophorus_couchianus
MGP_PahariEiJ_G0026606Smg510088.827ENSXMAG00000013499smg59966.052Xiphophorus_maculatus

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