EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0026671 (Gene tree)
Gene ID: 110320315
Gene Symbol: Rab13
Alias: 0610007N03Rik|B230212B15Rik
Full Name: RAB13%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 5149 bases
Position: chr4:80680611-80685759
Accession: 110320315
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0069758	MMR_HSR1	PF01926.23	0.00013	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0069758	-	1106	XM_021196250	MGP_PahariEiJ_P0069758	202 (aa)	XP_021051909	UPI000A30B3D9

Gene Model

Click here to download MGP_PahariEiJ_G0026671's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0026671's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0026671	Rab13	84	47.337	MGP_PahariEiJ_G0023919	Rab2a	80	47.337
MGP_PahariEiJ_G0026671	Rab13	82	46.667	MGP_PahariEiJ_G0015211	Rab11a	91	48.227
MGP_PahariEiJ_G0026671	Rab13	78	43.038	MGP_PahariEiJ_G0015453	Rab6b	76	43.038
MGP_PahariEiJ_G0026671	Rab13	76	32.468	MGP_PahariEiJ_G0021797	Rheb	83	32.468
MGP_PahariEiJ_G0026671	Rab13	94	45.789	MGP_PahariEiJ_G0030259	Rab2b	95	45.789
MGP_PahariEiJ_G0026671	Rab13	98	50.761	MGP_PahariEiJ_G0016776	Rab1a	96	50.761
MGP_PahariEiJ_G0026671	Rab13	91	41.053	MGP_PahariEiJ_G0024934	Rab14	88	41.053
MGP_PahariEiJ_G0026671	Rab13	91	45.902	MGP_PahariEiJ_G0013212	Rab30	89	45.902
MGP_PahariEiJ_G0026671	Rab13	57	30.508	MGP_PahariEiJ_G0018357	Arl4d	58	30.508
MGP_PahariEiJ_G0026671	Rab13	89	36.957	MGP_PahariEiJ_G0026193	Rab22a	95	36.957
MGP_PahariEiJ_G0026671	Rab13	80	42.857	MGP_PahariEiJ_G0020730	Rab5a	86	42.857
MGP_PahariEiJ_G0026671	Rab13	84	54.706	MGP_PahariEiJ_G0024212	Rab35	84	54.706
MGP_PahariEiJ_G0026671	Rab13	78	43.671	MGP_PahariEiJ_G0013273	Rab6a	76	43.671
MGP_PahariEiJ_G0026671	Rab13	67	30.147	MGP_PahariEiJ_G0021914	Arf5	72	30.147
MGP_PahariEiJ_G0026671	Rab13	82	47.273	MGP_PahariEiJ_G0020420	Rab11b	76	47.273
MGP_PahariEiJ_G0026671	Rab13	86	41.379	MGP_PahariEiJ_G0026616	Rab25	82	41.379
MGP_PahariEiJ_G0026671	Rab13	79	40.123	MGP_PahariEiJ_G0030851	Rab36	61	40.123
MGP_PahariEiJ_G0026671	Rab13	81	41.071	MGP_PahariEiJ_G0031967	Rab9b	83	41.071
MGP_PahariEiJ_G0026671	Rab13	62	30.952	MGP_PahariEiJ_G0014529	Arl3	66	30.952
MGP_PahariEiJ_G0026671	Rab13	94	53.158	MGP_PahariEiJ_G0014033	Rab1b	93	53.158
MGP_PahariEiJ_G0026671	Rab13	94	37.073	MGP_PahariEiJ_G0017931	Rab34	79	37.073
MGP_PahariEiJ_G0026671	Rab13	95	37.186	MGP_PahariEiJ_G0032112	Rab9	97	37.186
MGP_PahariEiJ_G0026671	Rab13	95	41.584	MGP_PahariEiJ_G0031589	Rab33a	83	41.584
MGP_PahariEiJ_G0026671	Rab13	82	44.311	MGP_PahariEiJ_G0018716	Rab18	81	44.311
MGP_PahariEiJ_G0026671	Rab13	84	54.118	MGP_PahariEiJ_G0029630	Rab15	80	54.118
MGP_PahariEiJ_G0026671	Rab13	81	38.788	MGP_PahariEiJ_G0027261	Rab23	69	38.788
MGP_PahariEiJ_G0026671	Rab13	80	39.506	MGP_PahariEiJ_G0022808	Kras	85	39.506
MGP_PahariEiJ_G0026671	Rab13	93	36.702	MGP_PahariEiJ_G0031135	Rab5b	87	36.702
MGP_PahariEiJ_G0026671	Rab13	80	35.583	MGP_PahariEiJ_G0015431	Mras	78	35.583
MGP_PahariEiJ_G0026671	Rab13	78	30.818	MGP_PahariEiJ_G0020181	Rabl2	69	30.818
MGP_PahariEiJ_G0026671	Rab13	84	43.103	MGP_PahariEiJ_G0026417	Rab33b	76	43.103
MGP_PahariEiJ_G0026671	Rab13	80	38.509	MGP_PahariEiJ_G0020817	Rab31	83	38.509
MGP_PahariEiJ_G0026671	Rab13	80	37.654	MGP_PahariEiJ_G0026889	Nras	97	37.415
MGP_PahariEiJ_G0026671	Rab13	62	30.000	MGP_PahariEiJ_G0026253	Arfrp1	67	30.000
MGP_PahariEiJ_G0026671	Rab13	95	42.424	MGP_PahariEiJ_G0018517	Rab37	88	42.424
MGP_PahariEiJ_G0026671	Rab13	81	39.286	MGP_PahariEiJ_G0022362	Rab7	92	43.333
MGP_PahariEiJ_G0026671	Rab13	96	36.082	MGP_PahariEiJ_G0013880	Hras	98	36.082
MGP_PahariEiJ_G0026671	Rab13	85	51.744	MGP_PahariEiJ_G0020826	Rab12	71	51.744
MGP_PahariEiJ_G0026671	Rab13	92	38.172	MGP_PahariEiJ_G0018314	Rab5c	86	38.172

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0026671	Rab13	99	92.079	ENSG00000143545	RAB13	99	92.079	Homo_sapiens
MGP_PahariEiJ_G0026671	Rab13	90	80.110	ENSACIG00000008584	rab13	87	80.110	Amphilophus_citrinellus
MGP_PahariEiJ_G0026671	Rab13	99	92.079	ENSANAG00000030247	-	99	92.079	Aotus_nancymaae
MGP_PahariEiJ_G0026671	Rab13	100	77.723	ENSAMXG00000030712	rab13	100	77.723	Astyanax_mexicanus
MGP_PahariEiJ_G0026671	Rab13	100	91.133	ENSBTAG00000017604	RAB13	100	91.133	Bos_taurus
MGP_PahariEiJ_G0026671	Rab13	80	46.012	WBGene00019317	K02E10.1	75	46.012	Caenorhabditis_elegans
MGP_PahariEiJ_G0026671	Rab13	94	93.122	ENSCJAG00000009933	-	99	91.089	Callithrix_jacchus
MGP_PahariEiJ_G0026671	Rab13	100	91.133	ENSCHIG00000022271	-	100	91.133	Capra_hircus
MGP_PahariEiJ_G0026671	Rab13	99	87.624	ENSCPOG00000011491	-	99	87.624	Cavia_porcellus
MGP_PahariEiJ_G0026671	Rab13	99	92.079	ENSCCAG00000028502	-	99	92.079	Cebus_capucinus
MGP_PahariEiJ_G0026671	Rab13	99	92.079	ENSCATG00000041779	-	99	92.079	Cercocebus_atys
MGP_PahariEiJ_G0026671	Rab13	99	87.129	ENSCLAG00000006603	-	99	87.129	Chinchilla_lanigera
MGP_PahariEiJ_G0026671	Rab13	99	92.079	ENSCANG00000036573	-	99	92.079	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0026671	Rab13	99	92.079	ENSCGRG00001021505	Rab13	99	92.079	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0026671	Rab13	99	92.079	ENSCGRG00000012126	Rab13	99	92.079	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0026671	Rab13	100	75.610	ENSCSEG00000002358	rab13	100	75.610	Cynoglossus_semilaevis
MGP_PahariEiJ_G0026671	Rab13	100	77.073	ENSDARG00000034771	rab13	100	77.073	Danio_rerio
MGP_PahariEiJ_G0026671	Rab13	99	90.099	ENSDORG00000001591	Rab13	99	90.099	Dipodomys_ordii
MGP_PahariEiJ_G0026671	Rab13	99	91.089	ENSEASG00005000683	-	99	91.089	Equus_asinus_asinus
MGP_PahariEiJ_G0026671	Rab13	99	91.089	ENSECAG00000016551	RAB13	99	91.089	Equus_caballus
MGP_PahariEiJ_G0026671	Rab13	100	86.700	ENSEEUG00000001233	-	100	86.700	Erinaceus_europaeus
MGP_PahariEiJ_G0026671	Rab13	100	75.743	ENSELUG00000012801	rab13	100	75.743	Esox_lucius
MGP_PahariEiJ_G0026671	Rab13	99	87.129	ENSFCAG00000045269	-	99	87.129	Felis_catus
MGP_PahariEiJ_G0026671	Rab13	65	96.212	ENSFDAG00000014469	-	100	96.212	Fukomys_damarensis
MGP_PahariEiJ_G0026671	Rab13	86	83.815	ENSFHEG00000021221	rab13	95	83.815	Fundulus_heteroclitus
MGP_PahariEiJ_G0026671	Rab13	99	75.622	ENSGACG00000011925	rab13	99	76.355	Gasterosteus_aculeatus
MGP_PahariEiJ_G0026671	Rab13	86	90.751	ENSGAGG00000000742	-	100	82.266	Gopherus_agassizii
MGP_PahariEiJ_G0026671	Rab13	99	92.079	ENSGGOG00000023693	RAB13	99	92.079	Gorilla_gorilla
MGP_PahariEiJ_G0026671	Rab13	99	87.065	ENSHGLG00000008749	RAB13	99	87.065	Heterocephalus_glaber_female
MGP_PahariEiJ_G0026671	Rab13	99	87.065	ENSHGLG00100013608	RAB13	99	87.065	Heterocephalus_glaber_male
MGP_PahariEiJ_G0026671	Rab13	100	71.707	ENSHCOG00000007440	rab13	95	84.393	Hippocampus_comes
MGP_PahariEiJ_G0026671	Rab13	100	74.038	ENSIPUG00000003199	rab13	100	74.038	Ictalurus_punctatus
MGP_PahariEiJ_G0026671	Rab13	99	91.089	ENSSTOG00000011222	-	99	91.089	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0026671	Rab13	99	87.624	ENSJJAG00000010575	Rab13	99	87.624	Jaculus_jaculus
MGP_PahariEiJ_G0026671	Rab13	100	73.267	ENSKMAG00000001908	rab13	100	73.267	Kryptolebias_marmoratus
MGP_PahariEiJ_G0026671	Rab13	100	74.146	ENSLBEG00000026779	rab13	100	74.146	Labrus_bergylta
MGP_PahariEiJ_G0026671	Rab13	85	78.488	ENSLACG00000008103	-	97	78.488	Latimeria_chalumnae
MGP_PahariEiJ_G0026671	Rab13	99	92.079	ENSMFAG00000041018	RAB13	99	92.079	Macaca_fascicularis
MGP_PahariEiJ_G0026671	Rab13	99	92.079	ENSMNEG00000028951	-	99	92.079	Macaca_nemestrina
MGP_PahariEiJ_G0026671	Rab13	99	92.079	ENSMLEG00000042247	-	99	92.079	Mandrillus_leucophaeus
MGP_PahariEiJ_G0026671	Rab13	100	73.171	ENSMAMG00000014602	rab13	100	73.171	Mastacembelus_armatus
MGP_PahariEiJ_G0026671	Rab13	99	91.584	ENSMAUG00000015713	Rab13	99	91.584	Mesocricetus_auratus
MGP_PahariEiJ_G0026671	Rab13	99	90.050	ENSMICG00000010340	-	99	90.050	Microcebus_murinus
MGP_PahariEiJ_G0026671	Rab13	99	93.069	ENSMOCG00000021448	Rab13	99	93.069	Microtus_ochrogaster
MGP_PahariEiJ_G0026671	Rab13	99	87.500	ENSMODG00000017295	-	84	87.500	Monodelphis_domestica
MGP_PahariEiJ_G0026671	Rab13	99	99.010	MGP_CAROLIEiJ_G0025227	Rab13	99	99.010	Mus_caroli
MGP_PahariEiJ_G0026671	Rab13	99	98.507	ENSMUSG00000027935	Rab13	99	98.507	Mus_musculus
MGP_PahariEiJ_G0026671	Rab13	99	92.537	ENSNGAG00000010309	Rab13	99	92.537	Nannospalax_galili
MGP_PahariEiJ_G0026671	Rab13	100	73.892	ENSNBRG00000004124	rab13	100	73.892	Neolamprologus_brichardi
MGP_PahariEiJ_G0026671	Rab13	99	92.079	ENSNLEG00000028944	-	99	92.079	Nomascus_leucogenys
MGP_PahariEiJ_G0026671	Rab13	99	87.624	ENSMEUG00000009667	-	99	87.624	Notamacropus_eugenii
MGP_PahariEiJ_G0026671	Rab13	63	97.638	ENSODEG00000012634	-	100	97.638	Octodon_degus
MGP_PahariEiJ_G0026671	Rab13	99	87.129	ENSODEG00000010443	-	99	87.129	Octodon_degus
MGP_PahariEiJ_G0026671	Rab13	100	74.752	ENSONIG00000006340	rab13	100	74.752	Oreochromis_niloticus
MGP_PahariEiJ_G0026671	Rab13	88	94.382	ENSOCUG00000006286	-	100	94.382	Oryctolagus_cuniculus
MGP_PahariEiJ_G0026671	Rab13	100	74.146	ENSOMEG00000008210	rab13	100	74.146	Oryzias_melastigma
MGP_PahariEiJ_G0026671	Rab13	99	88.557	ENSOGAG00000016969	-	99	88.557	Otolemur_garnettii
MGP_PahariEiJ_G0026671	Rab13	99	92.079	ENSPPAG00000028435	-	99	92.079	Pan_paniscus
MGP_PahariEiJ_G0026671	Rab13	99	87.129	ENSPPRG00000008865	-	99	87.129	Panthera_pardus
MGP_PahariEiJ_G0026671	Rab13	99	92.079	ENSPTRG00000001370	RAB13	99	92.079	Pan_troglodytes
MGP_PahariEiJ_G0026671	Rab13	99	92.079	ENSPANG00000004479	-	99	92.079	Papio_anubis
MGP_PahariEiJ_G0026671	Rab13	100	74.146	ENSPMGG00000007680	rab13	100	74.146	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0026671	Rab13	53	99.074	ENSPEMG00000017353	-	81	99.074	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0026671	Rab13	99	88.119	ENSPCIG00000029350	-	99	88.119	Phascolarctos_cinereus
MGP_PahariEiJ_G0026671	Rab13	93	77.540	ENSPLAG00000005832	RAB13	96	77.540	Poecilia_latipinna
MGP_PahariEiJ_G0026671	Rab13	86	82.081	ENSPREG00000017567	rab13	100	72.772	Poecilia_reticulata
MGP_PahariEiJ_G0026671	Rab13	99	92.079	ENSPPYG00000000790	-	99	92.079	Pongo_abelii
MGP_PahariEiJ_G0026671	Rab13	99	91.542	ENSPCOG00000012189	-	99	91.542	Propithecus_coquereli
MGP_PahariEiJ_G0026671	Rab13	99	91.045	ENSPVAG00000011095	-	99	91.045	Pteropus_vampyrus
MGP_PahariEiJ_G0026671	Rab13	86	84.393	ENSPNAG00000004189	rab13	92	84.393	Pygocentrus_nattereri
MGP_PahariEiJ_G0026671	Rab13	99	95.545	ENSRNOG00000016733	Rab13	99	95.545	Rattus_norvegicus
MGP_PahariEiJ_G0026671	Rab13	99	91.584	ENSRBIG00000008552	-	99	91.584	Rhinopithecus_bieti
MGP_PahariEiJ_G0026671	Rab13	99	91.584	ENSRROG00000036885	-	99	91.584	Rhinopithecus_roxellana
MGP_PahariEiJ_G0026671	Rab13	99	92.040	ENSSBOG00000020342	-	99	92.040	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0026671	Rab13	99	87.129	ENSSHAG00000011866	-	99	87.129	Sarcophilus_harrisii
MGP_PahariEiJ_G0026671	Rab13	99	91.584	ENSSSCG00000006564	-	99	91.584	Sus_scrofa
MGP_PahariEiJ_G0026671	Rab13	100	74.634	ENSTRUG00000024177	rab13	100	74.634	Takifugu_rubripes
MGP_PahariEiJ_G0026671	Rab13	99	91.584	ENSTBEG00000012734	-	99	91.584	Tupaia_belangeri
MGP_PahariEiJ_G0026671	Rab13	99	92.079	ENSTTRG00000011183	-	99	92.079	Tursiops_truncatus
MGP_PahariEiJ_G0026671	Rab13	74	77.181	ENSXETG00000020729	rab13	98	76.101	Xenopus_tropicalis
MGP_PahariEiJ_G0026671	Rab13	93	77.005	ENSXCOG00000019533	rab13	96	77.005	Xiphophorus_couchianus