EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0026753 (Gene tree)
Gene ID: 110319937
Gene Symbol: Tdrkh
Alias: 2700091C21Rik|Tdrd2
Full Name: tudor and KH domain containing
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 21795 bases
Position: chr4:84733963-84755757
Accession: 110319937
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0069928	KH_1	PF00013.29	1.8e-34	1	2
MGP_PahariEiJ_P0069928	KH_1	PF00013.29	1.8e-34	2	2
MGP_PahariEiJ_P0069926	KH_1	PF00013.29	1.1e-33	1	2
MGP_PahariEiJ_P0069926	KH_1	PF00013.29	1.1e-33	2	2
MGP_PahariEiJ_P0069929	KH_1	PF00013.29	1.1e-33	1	2
MGP_PahariEiJ_P0069929	KH_1	PF00013.29	1.1e-33	2	2
MGP_PahariEiJ_P0069930	KH_1	PF00013.29	1.1e-33	1	2
MGP_PahariEiJ_P0069930	KH_1	PF00013.29	1.1e-33	2	2
MGP_PahariEiJ_P0069932	KH_1	PF00013.29	5.5e-28	1	2
MGP_PahariEiJ_P0069932	KH_1	PF00013.29	5.5e-28	2	2
MGP_PahariEiJ_P0069933	KH_1	PF00013.29	2.8e-19	1	1
MGP_PahariEiJ_P0069931	KH_1	PF00013.29	2e-14	1	1
MGP_PahariEiJ_P0069933	TUDOR	PF00567.24	4.2e-29	1	1
MGP_PahariEiJ_P0069932	TUDOR	PF00567.24	4.8e-29	1	1
MGP_PahariEiJ_P0069926	TUDOR	PF00567.24	4.8e-29	1	1
MGP_PahariEiJ_P0069929	TUDOR	PF00567.24	4.8e-29	1	1
MGP_PahariEiJ_P0069930	TUDOR	PF00567.24	4.8e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0069930	-	2655	XM_021195687	MGP_PahariEiJ_P0069930	560 (aa)	XP_021051346	UPI000A308B3A
MGP_PahariEiJ_T0069926	-	5437	-	MGP_PahariEiJ_P0069926	560 (aa)	XP_021051347	UPI000A308B3A
MGP_PahariEiJ_T0069932	-	2599	-	MGP_PahariEiJ_P0069932	556 (aa)	-	-
MGP_PahariEiJ_T0069933	-	2489	-	MGP_PahariEiJ_P0069933	515 (aa)	XP_021051348	UPI000A312FBE
MGP_PahariEiJ_T0069929	-	2665	-	MGP_PahariEiJ_P0069929	560 (aa)	XP_021051347	UPI000A308B3A
MGP_PahariEiJ_T0069928	-	1230	-	MGP_PahariEiJ_P0069928	296 (aa)	-	-
MGP_PahariEiJ_T0069927	-	476	-	MGP_PahariEiJ_P0069927	50 (aa)	-	-
MGP_PahariEiJ_T0069931	-	1049	-	MGP_PahariEiJ_P0069931	140 (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0026753's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0026753's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0026753	Tdrkh	52	30.625	MGP_PahariEiJ_G0022114	Igf2bp3	55	30.625
MGP_PahariEiJ_G0026753	Tdrkh	80	31.707	MGP_PahariEiJ_G0024870	Fubp3	79	31.707

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0026753	Tdrkh	99	92.517	ENSG00000182134	TDRKH	100	98.473	Homo_sapiens
MGP_PahariEiJ_G0026753	Tdrkh	100	88.632	ENSAMEG00000000421	TDRKH	99	89.343	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0026753	Tdrkh	85	57.320	ENSACAG00000007457	TDRKH	95	57.320	Anolis_carolinensis
MGP_PahariEiJ_G0026753	Tdrkh	100	90.714	ENSANAG00000021663	TDRKH	98	92.475	Aotus_nancymaae
MGP_PahariEiJ_G0026753	Tdrkh	100	90.357	ENSBTAG00000021594	TDRKH	99	90.357	Bos_taurus
MGP_PahariEiJ_G0026753	Tdrkh	99	91.497	ENSCJAG00000007955	TDRKH	99	90.357	Callithrix_jacchus
MGP_PahariEiJ_G0026753	Tdrkh	100	90.409	ENSCAFG00000012856	TDRKH	99	90.409	Canis_familiaris
MGP_PahariEiJ_G0026753	Tdrkh	100	90.409	ENSCAFG00020009606	TDRKH	99	90.409	Canis_lupus_dingo
MGP_PahariEiJ_G0026753	Tdrkh	99	90.816	ENSCHIG00000025326	TDRKH	99	89.643	Capra_hircus
MGP_PahariEiJ_G0026753	Tdrkh	99	92.517	ENSTSYG00000010405	TDRKH	99	90.860	Carlito_syrichta
MGP_PahariEiJ_G0026753	Tdrkh	99	88.776	ENSCAPG00000007565	TDRKH	97	88.327	Cavia_aperea
MGP_PahariEiJ_G0026753	Tdrkh	100	89.821	ENSCPOG00000003556	TDRKH	99	89.821	Cavia_porcellus
MGP_PahariEiJ_G0026753	Tdrkh	100	90.357	ENSCCAG00000033931	TDRKH	99	90.357	Cebus_capucinus
MGP_PahariEiJ_G0026753	Tdrkh	99	93.197	ENSCATG00000041878	TDRKH	99	91.429	Cercocebus_atys
MGP_PahariEiJ_G0026753	Tdrkh	100	88.571	ENSCLAG00000001088	TDRKH	99	88.571	Chinchilla_lanigera
MGP_PahariEiJ_G0026753	Tdrkh	99	92.857	ENSCSAG00000001820	TDRKH	99	91.429	Chlorocebus_sabaeus
MGP_PahariEiJ_G0026753	Tdrkh	94	85.888	ENSCHOG00000000264	TDRKH	88	86.667	Choloepus_hoffmanni
MGP_PahariEiJ_G0026753	Tdrkh	99	62.034	ENSCPBG00000008824	TDRKH	89	63.956	Chrysemys_picta_bellii
MGP_PahariEiJ_G0026753	Tdrkh	99	92.177	ENSCANG00000037367	TDRKH	97	92.445	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0026753	Tdrkh	99	93.874	ENSCGRG00001006583	-	99	93.874	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0026753	Tdrkh	96	66.431	ENSCGRG00001010793	-	90	67.384	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0026753	Tdrkh	98	69.896	ENSCGRG00001011699	-	99	67.778	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0026753	Tdrkh	98	69.896	ENSCGRG00000013230	-	99	67.593	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0026753	Tdrkh	96	66.078	ENSCGRG00000012138	-	90	67.025	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0026753	Tdrkh	99	93.874	ENSCGRG00000012937	-	99	93.874	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0026753	Tdrkh	92	90.909	ENSDNOG00000035650	TDRKH	100	88.247	Dasypus_novemcinctus
MGP_PahariEiJ_G0026753	Tdrkh	99	93.537	ENSDORG00000015322	Tdrkh	99	92.143	Dipodomys_ordii
MGP_PahariEiJ_G0026753	Tdrkh	99	81.462	ENSETEG00000008020	TDRKH	99	81.462	Echinops_telfairi
MGP_PahariEiJ_G0026753	Tdrkh	87	36.647	ENSEBUG00000010481	TDRKH	83	36.452	Eptatretus_burgeri
MGP_PahariEiJ_G0026753	Tdrkh	100	90.893	ENSEASG00005005213	TDRKH	99	90.893	Equus_asinus_asinus
MGP_PahariEiJ_G0026753	Tdrkh	99	92.517	ENSECAG00000013096	TDRKH	97	93.638	Equus_caballus
MGP_PahariEiJ_G0026753	Tdrkh	76	94.393	ENSEEUG00000015952	TDRKH	71	95.000	Erinaceus_europaeus
MGP_PahariEiJ_G0026753	Tdrkh	100	91.103	ENSFCAG00000010980	TDRKH	99	91.103	Felis_catus
MGP_PahariEiJ_G0026753	Tdrkh	100	88.036	ENSFDAG00000015315	TDRKH	99	88.036	Fukomys_damarensis
MGP_PahariEiJ_G0026753	Tdrkh	97	56.364	ENSGALG00000031812	TDRKH	96	56.364	Gallus_gallus
MGP_PahariEiJ_G0026753	Tdrkh	99	62.392	ENSGAGG00000005447	TDRKH	99	62.912	Gopherus_agassizii
MGP_PahariEiJ_G0026753	Tdrkh	99	92.517	ENSGGOG00000025419	TDRKH	98	93.042	Gorilla_gorilla
MGP_PahariEiJ_G0026753	Tdrkh	100	87.900	ENSHGLG00000007478	TDRKH	99	87.900	Heterocephalus_glaber_female
MGP_PahariEiJ_G0026753	Tdrkh	100	87.900	ENSHGLG00100007927	TDRKH	99	87.900	Heterocephalus_glaber_male
MGP_PahariEiJ_G0026753	Tdrkh	100	91.964	ENSSTOG00000006506	TDRKH	99	91.964	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0026753	Tdrkh	99	90.847	ENSJJAG00000000323	Tdrkh	99	90.714	Jaculus_jaculus
MGP_PahariEiJ_G0026753	Tdrkh	72	67.925	ENSLACG00000017639	TDRKH	98	54.831	Latimeria_chalumnae
MGP_PahariEiJ_G0026753	Tdrkh	99	87.879	ENSLAFG00000006274	TDRKH	99	87.879	Loxodonta_africana
MGP_PahariEiJ_G0026753	Tdrkh	99	93.537	ENSMFAG00000041641	TDRKH	99	91.786	Macaca_fascicularis
MGP_PahariEiJ_G0026753	Tdrkh	99	93.537	ENSMMUG00000009096	TDRKH	97	93.638	Macaca_mulatta
MGP_PahariEiJ_G0026753	Tdrkh	99	93.537	ENSMNEG00000021524	TDRKH	99	91.786	Macaca_nemestrina
MGP_PahariEiJ_G0026753	Tdrkh	99	93.197	ENSMLEG00000033882	TDRKH	99	91.429	Mandrillus_leucophaeus
MGP_PahariEiJ_G0026753	Tdrkh	99	93.878	ENSMAUG00000019159	Tdrkh	99	92.639	Mesocricetus_auratus
MGP_PahariEiJ_G0026753	Tdrkh	100	72.143	ENSMICG00000042330	-	100	72.143	Microcebus_murinus
MGP_PahariEiJ_G0026753	Tdrkh	99	92.517	ENSMICG00000010682	-	99	91.429	Microcebus_murinus
MGP_PahariEiJ_G0026753	Tdrkh	99	91.837	ENSMOCG00000002113	-	99	84.239	Microtus_ochrogaster
MGP_PahariEiJ_G0026753	Tdrkh	99	70.748	ENSMOCG00000014074	-	99	65.125	Microtus_ochrogaster
MGP_PahariEiJ_G0026753	Tdrkh	100	81.195	ENSMODG00000018906	TDRKH	96	81.195	Monodelphis_domestica
MGP_PahariEiJ_G0026753	Tdrkh	100	98.986	MGP_CAROLIEiJ_G0025310	Tdrkh	100	98.986	Mus_caroli
MGP_PahariEiJ_G0026753	Tdrkh	100	99.286	ENSMUSG00000041912	Tdrkh	100	99.286	Mus_musculus
MGP_PahariEiJ_G0026753	Tdrkh	100	98.986	MGP_SPRETEiJ_G0026252	Tdrkh	100	98.986	Mus_spretus
MGP_PahariEiJ_G0026753	Tdrkh	99	90.203	ENSMPUG00000003558	TDRKH	99	89.680	Mustela_putorius_furo
MGP_PahariEiJ_G0026753	Tdrkh	100	88.750	ENSMLUG00000002213	TDRKH	99	88.750	Myotis_lucifugus
MGP_PahariEiJ_G0026753	Tdrkh	100	94.107	ENSNGAG00000017825	Tdrkh	100	94.107	Nannospalax_galili
MGP_PahariEiJ_G0026753	Tdrkh	99	92.857	ENSNLEG00000010284	TDRKH	98	93.042	Nomascus_leucogenys
MGP_PahariEiJ_G0026753	Tdrkh	95	94.805	ENSMEUG00000006144	TDRKH	89	94.805	Notamacropus_eugenii
MGP_PahariEiJ_G0026753	Tdrkh	86	90.909	ENSOPRG00000016049	TDRKH	80	90.909	Ochotona_princeps
MGP_PahariEiJ_G0026753	Tdrkh	100	88.214	ENSODEG00000009532	-	99	88.214	Octodon_degus
MGP_PahariEiJ_G0026753	Tdrkh	100	86.691	ENSODEG00000001075	-	99	86.691	Octodon_degus
MGP_PahariEiJ_G0026753	Tdrkh	62	72.340	ENSOANG00000001094	-	88	72.340	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0026753	Tdrkh	99	86.395	ENSOCUG00000001387	TDRKH	99	78.750	Oryctolagus_cuniculus
MGP_PahariEiJ_G0026753	Tdrkh	99	87.075	ENSOGAG00000001839	-	99	82.011	Otolemur_garnettii
MGP_PahariEiJ_G0026753	Tdrkh	98	75.862	ENSOGAG00000030085	-	98	74.138	Otolemur_garnettii
MGP_PahariEiJ_G0026753	Tdrkh	99	75.451	ENSOGAG00000032601	-	99	75.451	Otolemur_garnettii
MGP_PahariEiJ_G0026753	Tdrkh	99	90.816	ENSOARG00000021052	TDRKH	99	89.643	Ovis_aries
MGP_PahariEiJ_G0026753	Tdrkh	99	92.857	ENSPPAG00000028994	TDRKH	99	91.429	Pan_paniscus
MGP_PahariEiJ_G0026753	Tdrkh	100	91.459	ENSPPRG00000001585	TDRKH	99	91.459	Panthera_pardus
MGP_PahariEiJ_G0026753	Tdrkh	100	91.459	ENSPTIG00000019916	TDRKH	99	91.459	Panthera_tigris_altaica
MGP_PahariEiJ_G0026753	Tdrkh	99	92.857	ENSPTRG00000001297	TDRKH	98	93.241	Pan_troglodytes
MGP_PahariEiJ_G0026753	Tdrkh	99	92.857	ENSPANG00000001986	TDRKH	99	91.429	Papio_anubis
MGP_PahariEiJ_G0026753	Tdrkh	76	81.308	ENSPSIG00000008541	TDRKH	100	61.410	Pelodiscus_sinensis
MGP_PahariEiJ_G0026753	Tdrkh	99	97.959	ENSPEMG00000011171	Tdrkh	100	96.607	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0026753	Tdrkh	100	81.579	ENSPCIG00000021201	TDRKH	99	81.579	Phascolarctos_cinereus
MGP_PahariEiJ_G0026753	Tdrkh	99	92.517	ENSPPYG00000000855	TDRKH	99	91.429	Pongo_abelii
MGP_PahariEiJ_G0026753	Tdrkh	99	91.156	ENSPCOG00000027505	TDRKH	99	89.107	Propithecus_coquereli
MGP_PahariEiJ_G0026753	Tdrkh	100	86.607	ENSPVAG00000005234	TDRKH	99	86.607	Pteropus_vampyrus
MGP_PahariEiJ_G0026753	Tdrkh	100	97.857	ENSRNOG00000020860	Tdrkh	100	97.857	Rattus_norvegicus
MGP_PahariEiJ_G0026753	Tdrkh	99	92.517	ENSRBIG00000044860	TDRKH	99	91.429	Rhinopithecus_bieti
MGP_PahariEiJ_G0026753	Tdrkh	99	92.517	ENSRROG00000036923	TDRKH	99	91.429	Rhinopithecus_roxellana
MGP_PahariEiJ_G0026753	Tdrkh	100	90.203	ENSSBOG00000034454	TDRKH	99	71.964	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0026753	Tdrkh	100	81.547	ENSSHAG00000015859	TDRKH	88	81.547	Sarcophilus_harrisii
MGP_PahariEiJ_G0026753	Tdrkh	99	88.776	ENSSARG00000008525	TDRKH	99	78.533	Sorex_araneus
MGP_PahariEiJ_G0026753	Tdrkh	98	57.475	ENSSPUG00000002369	TDRKH	95	62.452	Sphenodon_punctatus
MGP_PahariEiJ_G0026753	Tdrkh	99	89.796	ENSSSCG00000027770	TDRKH	100	88.889	Sus_scrofa
MGP_PahariEiJ_G0026753	Tdrkh	100	89.643	ENSTBEG00000011201	TDRKH	99	89.643	Tupaia_belangeri
MGP_PahariEiJ_G0026753	Tdrkh	100	82.321	ENSTTRG00000003149	TDRKH	99	82.321	Tursiops_truncatus
MGP_PahariEiJ_G0026753	Tdrkh	100	89.324	ENSUAMG00000019589	TDRKH	99	89.324	Ursus_americanus
MGP_PahariEiJ_G0026753	Tdrkh	100	89.502	ENSUMAG00000001456	TDRKH	99	89.502	Ursus_maritimus
MGP_PahariEiJ_G0026753	Tdrkh	100	90.714	ENSVPAG00000000666	TDRKH	99	90.714	Vicugna_pacos
MGP_PahariEiJ_G0026753	Tdrkh	100	90.925	ENSVVUG00000013241	TDRKH	99	91.650	Vulpes_vulpes
MGP_PahariEiJ_G0026753	Tdrkh	94	39.273	ENSXETG00000019909	tdrkh	91	40.377	Xenopus_tropicalis