EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0026845 (Gene tree)
Gene ID: 110320098
Gene Symbol: Chd1l
Alias: 4432404A22Rik|Snf2p
Full Name: chromodomain helicase DNA binding protein 1 like
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 48182 bases
Position: chr4:87678337-87726518
Accession: 110320098
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0070376	ResIII	PF04851.15	2.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0070375	-	2990	-	MGP_PahariEiJ_P0070375	893 (aa)	-	UPI000A30AF1A
MGP_PahariEiJ_T0070376	-	3009	XM_021196000	MGP_PahariEiJ_P0070376	901 (aa)	XP_021051659	UPI000A31321C
MGP_PahariEiJ_T0070377	-	501	-	-	- (aa)	-	-
MGP_PahariEiJ_T0070378	-	2978	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0026845's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0026845's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0026845	Chd1l	52	30.469	MGP_PahariEiJ_G0028657	Rad54l	69	30.171
MGP_PahariEiJ_G0026845	Chd1l	54	38.830	MGP_PahariEiJ_G0014423	Hells	68	38.830
MGP_PahariEiJ_G0026845	Chd1l	50	32.781	MGP_PahariEiJ_G0019699	-	82	30.208
MGP_PahariEiJ_G0026845	Chd1l	63	42.007	MGP_PahariEiJ_G0022862	Smarca5	54	42.609
MGP_PahariEiJ_G0026845	Chd1l	51	30.116	MGP_PahariEiJ_G0023933	Rad54b	57	30.350
MGP_PahariEiJ_G0026845	Chd1l	60	43.501	MGP_PahariEiJ_G0023414	Chd1	53	43.847
MGP_PahariEiJ_G0026845	Chd1l	62	42.832	MGP_PahariEiJ_G0031579	Smarca1	75	41.952

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0026845	Chd1l	98	88.175	ENSG00000131778	CHD1L	100	87.864	Homo_sapiens
MGP_PahariEiJ_G0026845	Chd1l	96	65.000	ENSAPOG00000001539	chd1l	98	65.233	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0026845	Chd1l	99	85.538	ENSAMEG00000017063	CHD1L	99	85.538	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0026845	Chd1l	95	66.433	ENSACIG00000001164	chd1l	97	66.550	Amphilophus_citrinellus
MGP_PahariEiJ_G0026845	Chd1l	96	65.278	ENSAOCG00000014510	chd1l	86	64.966	Amphiprion_ocellaris
MGP_PahariEiJ_G0026845	Chd1l	98	61.433	ENSAPEG00000017450	chd1l	97	62.260	Amphiprion_percula
MGP_PahariEiJ_G0026845	Chd1l	96	62.937	ENSAPEG00000017573	chd1l	94	62.963	Amphiprion_percula
MGP_PahariEiJ_G0026845	Chd1l	98	65.034	ENSATEG00000013058	chd1l	93	65.034	Anabas_testudineus
MGP_PahariEiJ_G0026845	Chd1l	97	72.069	ENSAPLG00000009976	CHD1L	98	71.364	Anas_platyrhynchos
MGP_PahariEiJ_G0026845	Chd1l	95	68.457	ENSACAG00000017686	CHD1L	98	67.942	Anolis_carolinensis
MGP_PahariEiJ_G0026845	Chd1l	97	87.356	ENSANAG00000024347	CHD1L	97	87.185	Aotus_nancymaae
MGP_PahariEiJ_G0026845	Chd1l	98	64.846	ENSACLG00000019304	chd1l	96	64.726	Astatotilapia_calliptera
MGP_PahariEiJ_G0026845	Chd1l	99	59.371	ENSAMXG00000012367	chd1l	88	59.371	Astyanax_mexicanus
MGP_PahariEiJ_G0026845	Chd1l	99	86.292	ENSBTAG00000020831	CHD1L	99	86.292	Bos_taurus
MGP_PahariEiJ_G0026845	Chd1l	99	85.554	ENSCJAG00000002406	CHD1L	99	85.554	Callithrix_jacchus
MGP_PahariEiJ_G0026845	Chd1l	99	82.506	ENSCAFG00000010944	CHD1L	98	82.506	Canis_familiaris
MGP_PahariEiJ_G0026845	Chd1l	99	84.193	ENSCAFG00020020121	CHD1L	99	84.193	Canis_lupus_dingo
MGP_PahariEiJ_G0026845	Chd1l	99	85.344	ENSCHIG00000013871	CHD1L	99	85.795	Capra_hircus
MGP_PahariEiJ_G0026845	Chd1l	96	88.070	ENSTSYG00000003005	CHD1L	100	88.070	Carlito_syrichta
MGP_PahariEiJ_G0026845	Chd1l	98	84.086	ENSCPOG00000009000	CHD1L	100	83.278	Cavia_porcellus
MGP_PahariEiJ_G0026845	Chd1l	99	82.979	ENSCCAG00000036079	CHD1L	99	82.979	Cebus_capucinus
MGP_PahariEiJ_G0026845	Chd1l	99	86.786	ENSCATG00000031044	CHD1L	99	86.786	Cercocebus_atys
MGP_PahariEiJ_G0026845	Chd1l	100	84.916	ENSCLAG00000000880	CHD1L	100	85.396	Chinchilla_lanigera
MGP_PahariEiJ_G0026845	Chd1l	99	87.010	ENSCSAG00000018386	CHD1L	99	87.010	Chlorocebus_sabaeus
MGP_PahariEiJ_G0026845	Chd1l	98	74.371	ENSCPBG00000002600	CHD1L	100	73.401	Chrysemys_picta_bellii
MGP_PahariEiJ_G0026845	Chd1l	99	85.554	ENSCANG00000020239	CHD1L	99	85.554	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0026845	Chd1l	99	89.597	ENSCGRG00001021624	Chd1l	99	89.597	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0026845	Chd1l	95	89.906	ENSCGRG00000007554	Chd1l	99	89.906	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0026845	Chd1l	98	64.253	ENSCVAG00000002595	chd1l	90	64.253	Cyprinodon_variegatus
MGP_PahariEiJ_G0026845	Chd1l	96	66.783	ENSDARG00000015471	chd1l	85	66.171	Danio_rerio
MGP_PahariEiJ_G0026845	Chd1l	99	85.987	ENSDNOG00000019504	CHD1L	99	85.987	Dasypus_novemcinctus
MGP_PahariEiJ_G0026845	Chd1l	100	80.752	ENSDORG00000013555	Chd1l	100	81.195	Dipodomys_ordii
MGP_PahariEiJ_G0026845	Chd1l	88	77.329	ENSETEG00000008445	CHD1L	90	78.032	Echinops_telfairi
MGP_PahariEiJ_G0026845	Chd1l	66	60.938	ENSEBUG00000005791	chd1l	77	60.938	Eptatretus_burgeri
MGP_PahariEiJ_G0026845	Chd1l	99	86.538	ENSEASG00005007364	CHD1L	99	87.790	Equus_asinus_asinus
MGP_PahariEiJ_G0026845	Chd1l	99	86.425	ENSECAG00000008915	CHD1L	99	87.668	Equus_caballus
MGP_PahariEiJ_G0026845	Chd1l	96	55.774	ENSELUG00000016844	chd1l	85	55.040	Esox_lucius
MGP_PahariEiJ_G0026845	Chd1l	98	85.471	ENSFCAG00000007777	CHD1L	99	85.347	Felis_catus
MGP_PahariEiJ_G0026845	Chd1l	99	71.221	ENSFALG00000006087	CHD1L	99	71.413	Ficedula_albicollis
MGP_PahariEiJ_G0026845	Chd1l	94	86.801	ENSFDAG00000012431	CHD1L	100	85.930	Fukomys_damarensis
MGP_PahariEiJ_G0026845	Chd1l	98	63.470	ENSFHEG00000012420	chd1l	87	63.699	Fundulus_heteroclitus
MGP_PahariEiJ_G0026845	Chd1l	99	70.562	ENSGALG00000015038	CHD1L	99	70.674	Gallus_gallus
MGP_PahariEiJ_G0026845	Chd1l	98	64.262	ENSGAFG00000018198	chd1l	97	62.368	Gambusia_affinis
MGP_PahariEiJ_G0026845	Chd1l	58	65.709	ENSGACG00000014042	chd1l	99	65.709	Gasterosteus_aculeatus
MGP_PahariEiJ_G0026845	Chd1l	95	75.590	ENSGAGG00000014432	CHD1L	96	75.590	Gopherus_agassizii
MGP_PahariEiJ_G0026845	Chd1l	99	86.114	ENSGGOG00000001067	CHD1L	99	86.114	Gorilla_gorilla
MGP_PahariEiJ_G0026845	Chd1l	98	64.733	ENSHBUG00000007464	chd1l	96	65.046	Haplochromis_burtoni
MGP_PahariEiJ_G0026845	Chd1l	100	83.911	ENSHGLG00000008933	CHD1L	100	84.058	Heterocephalus_glaber_female
MGP_PahariEiJ_G0026845	Chd1l	95	82.887	ENSHGLG00100007155	CHD1L	100	83.391	Heterocephalus_glaber_male
MGP_PahariEiJ_G0026845	Chd1l	94	62.843	ENSHCOG00000012787	chd1l	92	62.843	Hippocampus_comes
MGP_PahariEiJ_G0026845	Chd1l	99	60.722	ENSIPUG00000022617	chd1l	87	60.494	Ictalurus_punctatus
MGP_PahariEiJ_G0026845	Chd1l	100	76.386	ENSSTOG00000007032	CHD1L	100	77.162	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0026845	Chd1l	97	64.638	ENSKMAG00000014358	chd1l	85	65.143	Kryptolebias_marmoratus
MGP_PahariEiJ_G0026845	Chd1l	97	63.959	ENSLBEG00000023845	chd1l	98	63.046	Labrus_bergylta
MGP_PahariEiJ_G0026845	Chd1l	96	64.794	ENSLACG00000006262	CHD1L	87	64.414	Latimeria_chalumnae
MGP_PahariEiJ_G0026845	Chd1l	95	71.226	ENSLOCG00000010574	chd1l	87	70.103	Lepisosteus_oculatus
MGP_PahariEiJ_G0026845	Chd1l	96	85.698	ENSLAFG00000018136	CHD1L	100	85.947	Loxodonta_africana
MGP_PahariEiJ_G0026845	Chd1l	96	86.744	ENSMFAG00000043562	CHD1L	100	87.923	Macaca_fascicularis
MGP_PahariEiJ_G0026845	Chd1l	99	86.674	ENSMMUG00000009024	CHD1L	99	86.674	Macaca_mulatta
MGP_PahariEiJ_G0026845	Chd1l	99	86.786	ENSMNEG00000039905	CHD1L	99	86.786	Macaca_nemestrina
MGP_PahariEiJ_G0026845	Chd1l	99	87.010	ENSMLEG00000030900	CHD1L	99	87.010	Mandrillus_leucophaeus
MGP_PahariEiJ_G0026845	Chd1l	96	63.626	ENSMAMG00000012822	chd1l	98	61.877	Mastacembelus_armatus
MGP_PahariEiJ_G0026845	Chd1l	98	64.846	ENSMZEG00005020830	chd1l	88	64.846	Maylandia_zebra
MGP_PahariEiJ_G0026845	Chd1l	96	71.062	ENSMGAG00000014304	CHD1L	99	71.478	Meleagris_gallopavo
MGP_PahariEiJ_G0026845	Chd1l	99	87.108	ENSMICG00000002497	CHD1L	99	87.108	Microcebus_murinus
MGP_PahariEiJ_G0026845	Chd1l	100	90.798	ENSMOCG00000006305	Chd1l	100	90.798	Microtus_ochrogaster
MGP_PahariEiJ_G0026845	Chd1l	96	61.130	ENSMMOG00000005964	chd1l	91	61.130	Mola_mola
MGP_PahariEiJ_G0026845	Chd1l	99	78.427	ENSMODG00000018717	CHD1L	99	78.539	Monodelphis_domestica
MGP_PahariEiJ_G0026845	Chd1l	97	63.813	ENSMALG00000014675	chd1l	86	63.864	Monopterus_albus
MGP_PahariEiJ_G0026845	Chd1l	100	96.089	MGP_CAROLIEiJ_G0025401	Chd1l	100	96.089	Mus_caroli
MGP_PahariEiJ_G0026845	Chd1l	100	96.231	ENSMUSG00000028089	Chd1l	100	96.231	Mus_musculus
MGP_PahariEiJ_G0026845	Chd1l	100	96.197	MGP_SPRETEiJ_G0026347	Chd1l	100	96.197	Mus_spretus
MGP_PahariEiJ_G0026845	Chd1l	99	84.382	ENSMPUG00000000615	CHD1L	99	84.382	Mustela_putorius_furo
MGP_PahariEiJ_G0026845	Chd1l	99	82.111	ENSMLUG00000007573	CHD1L	99	82.444	Myotis_lucifugus
MGP_PahariEiJ_G0026845	Chd1l	97	85.405	ENSNGAG00000000908	Chd1l	99	85.405	Nannospalax_galili
MGP_PahariEiJ_G0026845	Chd1l	95	63.531	ENSNBRG00000006021	chd1l	93	63.531	Neolamprologus_brichardi
MGP_PahariEiJ_G0026845	Chd1l	99	85.890	ENSNLEG00000000179	CHD1L	99	85.890	Nomascus_leucogenys
MGP_PahariEiJ_G0026845	Chd1l	95	73.412	ENSOPRG00000006973	CHD1L	99	73.412	Ochotona_princeps
MGP_PahariEiJ_G0026845	Chd1l	100	80.177	ENSODEG00000002494	CHD1L	100	81.105	Octodon_degus
MGP_PahariEiJ_G0026845	Chd1l	98	65.000	ENSONIG00000003183	chd1l	89	65.188	Oreochromis_niloticus
MGP_PahariEiJ_G0026845	Chd1l	86	71.835	ENSOANG00000003068	CHD1L	93	72.351	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0026845	Chd1l	100	80.994	ENSOCUG00000009336	CHD1L	99	80.552	Oryctolagus_cuniculus
MGP_PahariEiJ_G0026845	Chd1l	98	62.997	ENSORLG00000003673	chd1l	95	63.356	Oryzias_latipes
MGP_PahariEiJ_G0026845	Chd1l	95	64.136	ENSORLG00020005123	chd1l	94	64.583	Oryzias_latipes_hni
MGP_PahariEiJ_G0026845	Chd1l	98	62.867	ENSORLG00015001680	chd1l	98	63.908	Oryzias_latipes_hsok
MGP_PahariEiJ_G0026845	Chd1l	85	58.293	ENSOMEG00000006109	chd1l	86	58.226	Oryzias_melastigma
MGP_PahariEiJ_G0026845	Chd1l	99	84.736	ENSOGAG00000008775	CHD1L	99	84.736	Otolemur_garnettii
MGP_PahariEiJ_G0026845	Chd1l	99	85.039	ENSOARG00000020547	CHD1L	99	86.753	Ovis_aries
MGP_PahariEiJ_G0026845	Chd1l	95	87.352	ENSPPAG00000039193	CHD1L	100	87.666	Pan_paniscus
MGP_PahariEiJ_G0026845	Chd1l	98	86.039	ENSPPRG00000010258	CHD1L	99	85.459	Panthera_pardus
MGP_PahariEiJ_G0026845	Chd1l	96	88.462	ENSPTRG00000001220	CHD1L	99	86.547	Pan_troglodytes
MGP_PahariEiJ_G0026845	Chd1l	99	86.898	ENSPANG00000009170	CHD1L	99	86.898	Papio_anubis
MGP_PahariEiJ_G0026845	Chd1l	99	64.588	ENSPKIG00000022166	chd1l	97	63.658	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0026845	Chd1l	98	74.371	ENSPSIG00000012595	CHD1L	99	73.513	Pelodiscus_sinensis
MGP_PahariEiJ_G0026845	Chd1l	99	88.004	ENSPEMG00000013528	Chd1l	100	88.261	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0026845	Chd1l	93	79.831	ENSPCIG00000030409	CHD1L	100	79.952	Phascolarctos_cinereus
MGP_PahariEiJ_G0026845	Chd1l	98	64.766	ENSPFOG00000015948	chd1l	86	64.766	Poecilia_formosa
MGP_PahariEiJ_G0026845	Chd1l	98	65.158	ENSPLAG00000015145	chd1l	98	63.864	Poecilia_latipinna
MGP_PahariEiJ_G0026845	Chd1l	98	64.512	ENSPMEG00000008720	chd1l	91	64.853	Poecilia_mexicana
MGP_PahariEiJ_G0026845	Chd1l	96	63.437	ENSPREG00000017885	chd1l	97	63.437	Poecilia_reticulata
MGP_PahariEiJ_G0026845	Chd1l	99	86.883	ENSPPYG00000000946	CHD1L	99	86.883	Pongo_abelii
MGP_PahariEiJ_G0026845	Chd1l	98	75.571	ENSPCAG00000005959	CHD1L	97	76.256	Procavia_capensis
MGP_PahariEiJ_G0026845	Chd1l	95	79.575	ENSPVAG00000006084	CHD1L	100	79.575	Pteropus_vampyrus
MGP_PahariEiJ_G0026845	Chd1l	95	65.162	ENSPNYG00000013001	chd1l	95	65.162	Pundamilia_nyererei
MGP_PahariEiJ_G0026845	Chd1l	98	64.505	ENSPNAG00000011881	chd1l	87	64.182	Pygocentrus_nattereri
MGP_PahariEiJ_G0026845	Chd1l	100	93.142	ENSRNOG00000017669	Chd1l	100	93.473	Rattus_norvegicus
MGP_PahariEiJ_G0026845	Chd1l	99	85.554	ENSRBIG00000041272	CHD1L	99	85.554	Rhinopithecus_bieti
MGP_PahariEiJ_G0026845	Chd1l	97	85.961	ENSRROG00000041354	CHD1L	98	85.878	Rhinopithecus_roxellana
MGP_PahariEiJ_G0026845	Chd1l	99	75.084	ENSSHAG00000017395	CHD1L	99	75.309	Sarcophilus_harrisii
MGP_PahariEiJ_G0026845	Chd1l	97	66.049	ENSSFOG00015003649	chd1l	97	64.836	Scleropages_formosus
MGP_PahariEiJ_G0026845	Chd1l	97	61.443	ENSSMAG00000019377	chd1l	96	60.274	Scophthalmus_maximus
MGP_PahariEiJ_G0026845	Chd1l	94	64.846	ENSSDUG00000019831	chd1l	94	64.846	Seriola_dumerili
MGP_PahariEiJ_G0026845	Chd1l	95	64.361	ENSSLDG00000012714	chd1l	95	64.361	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0026845	Chd1l	99	71.026	ENSSPUG00000016865	CHD1L	99	71.509	Sphenodon_punctatus
MGP_PahariEiJ_G0026845	Chd1l	96	64.971	ENSSPAG00000017653	chd1l	92	64.652	Stegastes_partitus
MGP_PahariEiJ_G0026845	Chd1l	98	83.504	ENSSSCG00000006701	CHD1L	100	82.941	Sus_scrofa
MGP_PahariEiJ_G0026845	Chd1l	95	73.216	ENSTGUG00000013392	-	100	72.706	Taeniopygia_guttata
MGP_PahariEiJ_G0026845	Chd1l	95	59.953	ENSTNIG00000004902	chd1l	99	59.488	Tetraodon_nigroviridis
MGP_PahariEiJ_G0026845	Chd1l	96	83.664	ENSTTRG00000011711	CHD1L	100	83.664	Tursiops_truncatus
MGP_PahariEiJ_G0026845	Chd1l	99	84.753	ENSUAMG00000021991	CHD1L	99	84.865	Ursus_americanus
MGP_PahariEiJ_G0026845	Chd1l	99	84.529	ENSUMAG00000009733	CHD1L	99	84.529	Ursus_maritimus
MGP_PahariEiJ_G0026845	Chd1l	99	84.099	ENSVVUG00000007316	CHD1L	95	84.099	Vulpes_vulpes
MGP_PahariEiJ_G0026845	Chd1l	97	62.202	ENSXCOG00000008336	chd1l	86	62.472	Xiphophorus_couchianus
MGP_PahariEiJ_G0026845	Chd1l	98	64.819	ENSXMAG00000015898	chd1l	97	59.884	Xiphophorus_maculatus