EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0026903 (Gene tree)
Gene ID: 110320246
Gene Symbol: -
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein F-like
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 2142 bases
Position: chr4:93618081-93620222
Accession: 110320246
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0070619	zf-RNPHF	PF08080.12	4.7e-22	1	1
MGP_PahariEiJ_P0070619	RRM_1	PF00076.22	1.9e-28	1	2
MGP_PahariEiJ_P0070619	RRM_1	PF00076.22	1.9e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0070619	-	2142	XM_021190362	MGP_PahariEiJ_P0070619	415 (aa)	XP_021046021	UPI000A30DD2A

Gene Model

Click here to download MGP_PahariEiJ_G0026903's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0026903's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0026903	-	96	71.942	MGP_PahariEiJ_G0031936	Hnrnph2	97	71.954
MGP_PahariEiJ_G0026903	-	57	70.248	MGP_PahariEiJ_G0030812	Hnrnph3	97	57.012
MGP_PahariEiJ_G0026903	-	99	73.850	MGP_PahariEiJ_G0017426	Hnrnph1	97	73.103
MGP_PahariEiJ_G0026903	-	87	41.129	MGP_PahariEiJ_G0017155	Grsf1	97	45.185

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0026903	-	100	96.867	ENSG00000169813	HNRNPF	100	96.867	Homo_sapiens
MGP_PahariEiJ_G0026903	-	100	96.145	ENSAMEG00000018983	HNRNPF	100	96.145	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0026903	-	100	94.217	ENSANAG00000033285	-	100	94.217	Aotus_nancymaae
MGP_PahariEiJ_G0026903	-	89	81.892	ENSANAG00000033452	-	89	81.892	Aotus_nancymaae
MGP_PahariEiJ_G0026903	-	100	78.998	ENSBTAG00000020513	-	100	78.998	Bos_taurus
MGP_PahariEiJ_G0026903	-	100	96.145	ENSBTAG00000008853	HNRNPF	100	96.145	Bos_taurus
MGP_PahariEiJ_G0026903	-	100	97.349	ENSCJAG00000008291	HNRNPF	100	97.349	Callithrix_jacchus
MGP_PahariEiJ_G0026903	-	100	96.145	ENSCAFG00000007044	HNRNPF	100	96.145	Canis_familiaris
MGP_PahariEiJ_G0026903	-	97	72.372	ENSCHIG00000022971	-	99	72.372	Capra_hircus
MGP_PahariEiJ_G0026903	-	100	96.145	ENSCHIG00000006714	HNRNPF	100	96.145	Capra_hircus
MGP_PahariEiJ_G0026903	-	100	82.452	ENSTSYG00000002112	-	100	82.452	Carlito_syrichta
MGP_PahariEiJ_G0026903	-	100	96.627	ENSTSYG00000030439	-	100	96.627	Carlito_syrichta
MGP_PahariEiJ_G0026903	-	99	97.585	ENSCAPG00000011521	HNRNPF	99	97.585	Cavia_aperea
MGP_PahariEiJ_G0026903	-	99	97.585	ENSCPOG00000003678	HNRNPF	99	97.585	Cavia_porcellus
MGP_PahariEiJ_G0026903	-	100	97.108	ENSCCAG00000031457	-	100	97.108	Cebus_capucinus
MGP_PahariEiJ_G0026903	-	100	79.036	ENSCCAG00000028687	-	100	79.036	Cebus_capucinus
MGP_PahariEiJ_G0026903	-	99	97.585	ENSCLAG00000005161	HNRNPF	99	97.585	Chinchilla_lanigera
MGP_PahariEiJ_G0026903	-	100	95.422	ENSCANG00000003086	-	100	95.422	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0026903	-	100	98.795	ENSCGRG00001016276	Hnrnpf	100	98.795	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0026903	-	94	74.103	ENSCGRG00001016206	-	88	74.103	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0026903	-	100	92.048	ENSDNOG00000030849	-	100	92.048	Dasypus_novemcinctus
MGP_PahariEiJ_G0026903	-	100	88.434	ENSDORG00000005431	-	100	88.434	Dipodomys_ordii
MGP_PahariEiJ_G0026903	-	100	90.120	ENSDORG00000008260	-	100	90.120	Dipodomys_ordii
MGP_PahariEiJ_G0026903	-	100	93.976	ENSDORG00000024936	-	100	93.976	Dipodomys_ordii
MGP_PahariEiJ_G0026903	-	100	96.867	ENSDORG00000024298	-	100	96.867	Dipodomys_ordii
MGP_PahariEiJ_G0026903	-	100	96.386	ENSEASG00005006903	HNRNPF	100	96.386	Equus_asinus_asinus
MGP_PahariEiJ_G0026903	-	100	92.530	ENSECAG00000003229	HNRNPF	100	92.530	Equus_caballus
MGP_PahariEiJ_G0026903	-	100	96.145	ENSFCAG00000028219	-	100	96.145	Felis_catus
MGP_PahariEiJ_G0026903	-	99	88.041	ENSFDAG00000007858	-	98	88.041	Fukomys_damarensis
MGP_PahariEiJ_G0026903	-	99	97.585	ENSFDAG00000011431	-	99	97.585	Fukomys_damarensis
MGP_PahariEiJ_G0026903	-	99	80.676	ENSFDAG00000015308	-	99	80.676	Fukomys_damarensis
MGP_PahariEiJ_G0026903	-	91	96.277	ENSGGOG00000010867	HNRNPF	93	96.277	Gorilla_gorilla
MGP_PahariEiJ_G0026903	-	98	92.553	ENSHGLG00000014139	-	97	92.553	Heterocephalus_glaber_female
MGP_PahariEiJ_G0026903	-	99	97.343	ENSHGLG00000000147	-	99	97.343	Heterocephalus_glaber_female
MGP_PahariEiJ_G0026903	-	99	87.198	ENSHGLG00000017607	-	100	87.198	Heterocephalus_glaber_female
MGP_PahariEiJ_G0026903	-	100	93.012	ENSHGLG00000010276	-	100	93.012	Heterocephalus_glaber_female
MGP_PahariEiJ_G0026903	-	99	96.287	ENSHGLG00100020825	-	100	96.287	Heterocephalus_glaber_male
MGP_PahariEiJ_G0026903	-	99	92.754	ENSHGLG00100019558	-	100	92.754	Heterocephalus_glaber_male
MGP_PahariEiJ_G0026903	-	99	89.394	ENSHGLG00100019910	-	100	89.394	Heterocephalus_glaber_male
MGP_PahariEiJ_G0026903	-	99	93.237	ENSHGLG00100019572	-	99	93.237	Heterocephalus_glaber_male
MGP_PahariEiJ_G0026903	-	91	85.372	ENSHGLG00100010905	-	97	85.372	Heterocephalus_glaber_male
MGP_PahariEiJ_G0026903	-	100	87.019	ENSSTOG00000022853	-	100	87.019	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0026903	-	100	82.014	ENSSTOG00000023820	-	100	82.014	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0026903	-	100	97.590	ENSSTOG00000025560	-	100	97.590	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0026903	-	100	88.193	ENSJJAG00000017385	-	100	88.193	Jaculus_jaculus
MGP_PahariEiJ_G0026903	-	100	81.446	ENSJJAG00000022288	-	100	81.446	Jaculus_jaculus
MGP_PahariEiJ_G0026903	-	98	94.624	ENSJJAG00000014334	-	99	94.624	Jaculus_jaculus
MGP_PahariEiJ_G0026903	-	100	73.206	ENSJJAG00000000554	-	100	73.206	Jaculus_jaculus
MGP_PahariEiJ_G0026903	-	100	64.096	ENSJJAG00000014424	-	100	64.096	Jaculus_jaculus
MGP_PahariEiJ_G0026903	-	99	94.699	ENSLAFG00000000424	HNRNPF	99	94.699	Loxodonta_africana
MGP_PahariEiJ_G0026903	-	100	96.867	ENSMFAG00000021184	HNRNPF	100	96.867	Macaca_fascicularis
MGP_PahariEiJ_G0026903	-	100	96.867	ENSMMUG00000020982	HNRNPF	100	96.867	Macaca_mulatta
MGP_PahariEiJ_G0026903	-	100	96.867	ENSMLEG00000023515	HNRNPF	100	96.867	Mandrillus_leucophaeus
MGP_PahariEiJ_G0026903	-	100	98.795	ENSMAUG00000007892	Hnrnpf	100	98.795	Mesocricetus_auratus
MGP_PahariEiJ_G0026903	-	99	78.147	ENSMICG00000044171	-	99	78.147	Microcebus_murinus
MGP_PahariEiJ_G0026903	-	99	78.261	ENSMICG00000043739	-	99	78.261	Microcebus_murinus
MGP_PahariEiJ_G0026903	-	100	97.590	ENSMOCG00000014915	Hnrnpf	100	97.590	Microtus_ochrogaster
MGP_PahariEiJ_G0026903	-	100	98.795	ENSMUSG00000042079	Hnrnpf	100	98.795	Mus_musculus
MGP_PahariEiJ_G0026903	-	99	96.241	ENSMPUG00000017283	HNRNPF	99	96.241	Mustela_putorius_furo
MGP_PahariEiJ_G0026903	-	100	94.471	ENSMLUG00000007261	HNRNPF	100	94.471	Myotis_lucifugus
MGP_PahariEiJ_G0026903	-	100	70.361	ENSNGAG00000009482	-	100	70.361	Nannospalax_galili
MGP_PahariEiJ_G0026903	-	100	80.723	ENSNGAG00000014079	-	100	80.723	Nannospalax_galili
MGP_PahariEiJ_G0026903	-	100	98.313	ENSNGAG00000010409	-	100	98.313	Nannospalax_galili
MGP_PahariEiJ_G0026903	-	100	96.867	ENSNLEG00000019098	HNRNPF	100	96.867	Nomascus_leucogenys
MGP_PahariEiJ_G0026903	-	99	90.534	ENSODEG00000002359	-	99	90.534	Octodon_degus
MGP_PahariEiJ_G0026903	-	99	97.585	ENSODEG00000019266	-	99	97.585	Octodon_degus
MGP_PahariEiJ_G0026903	-	100	97.108	ENSOCUG00000024719	-	100	97.108	Oryctolagus_cuniculus
MGP_PahariEiJ_G0026903	-	100	92.048	ENSOCUG00000024604	-	100	92.048	Oryctolagus_cuniculus
MGP_PahariEiJ_G0026903	-	99	90.120	ENSOGAG00000013734	-	99	90.120	Otolemur_garnettii
MGP_PahariEiJ_G0026903	-	100	92.771	ENSOGAG00000030480	-	100	92.771	Otolemur_garnettii
MGP_PahariEiJ_G0026903	-	99	97.003	ENSOARG00000003995	HNRNPF	91	97.003	Ovis_aries
MGP_PahariEiJ_G0026903	-	100	79.277	ENSOARG00000016658	-	100	79.277	Ovis_aries
MGP_PahariEiJ_G0026903	-	100	96.145	ENSPPRG00000021222	HNRNPF	100	96.145	Panthera_pardus
MGP_PahariEiJ_G0026903	-	100	96.145	ENSPTIG00000009644	HNRNPF	100	96.145	Panthera_tigris_altaica
MGP_PahariEiJ_G0026903	-	100	96.867	ENSPTRG00000002446	HNRNPF	100	96.867	Pan_troglodytes
MGP_PahariEiJ_G0026903	-	100	96.627	ENSPANG00000002212	HNRNPF	100	96.627	Papio_anubis
MGP_PahariEiJ_G0026903	-	100	96.867	ENSPPYG00000002212	HNRNPF	100	96.867	Pongo_abelii
MGP_PahariEiJ_G0026903	-	100	94.231	ENSPCAG00000013169	HNRNPF	100	94.231	Procavia_capensis
MGP_PahariEiJ_G0026903	-	100	95.422	ENSPVAG00000011646	HNRNPF	100	95.422	Pteropus_vampyrus
MGP_PahariEiJ_G0026903	-	100	98.795	ENSRNOG00000014562	Hnrnpf	100	98.795	Rattus_norvegicus
MGP_PahariEiJ_G0026903	-	100	96.867	ENSRROG00000001235	HNRNPF	100	96.867	Rhinopithecus_roxellana
MGP_PahariEiJ_G0026903	-	100	97.349	ENSSBOG00000018361	HNRNPF	100	97.349	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0026903	-	100	96.867	ENSSARG00000010059	HNRNPF	100	96.867	Sorex_araneus
MGP_PahariEiJ_G0026903	-	100	95.422	ENSSSCG00000010203	-	100	95.422	Sus_scrofa
MGP_PahariEiJ_G0026903	-	100	56.971	ENSSSCG00000024956	-	96	56.971	Sus_scrofa
MGP_PahariEiJ_G0026903	-	98	70.370	ENSTBEG00000016094	HNRNPF	100	70.370	Tupaia_belangeri
MGP_PahariEiJ_G0026903	-	100	96.145	ENSUAMG00000000455	HNRNPF	100	96.145	Ursus_americanus
MGP_PahariEiJ_G0026903	-	100	96.145	ENSUMAG00000016485	HNRNPF	100	96.145	Ursus_maritimus
MGP_PahariEiJ_G0026903	-	100	96.145	ENSVVUG00000021261	HNRNPF	100	96.145	Vulpes_vulpes