EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0026919 (Gene tree)
Gene ID: 110320090
Gene Symbol: Ddx20
Alias: GEMIN3|dp103
Full Name: DEAD-box helicase 20
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 9040 bases
Position: chr4:95378018-95387057
Accession: 110320090
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0070695	ResIII	PF04851.15	3.7e-06	1	1
MGP_PahariEiJ_P0070695	DEAD	PF00270.29	8e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0070697	-	2097	-	-	- (aa)	-	-
MGP_PahariEiJ_T0070696	-	1279	-	MGP_PahariEiJ_P0070696	144 (aa)	-	-
MGP_PahariEiJ_T0070695	-	2917	XM_021195989	MGP_PahariEiJ_P0070695	829 (aa)	XP_021051648	UPI000A30E3C9

Gene Model

Click here to download MGP_PahariEiJ_G0026919's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0026919's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0026919	Ddx20	52	32.184	MGP_PahariEiJ_G0014991	Ddx6	75	34.316

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0026919	Ddx20	99	82.826	ENSG00000064703	DDX20	96	83.965	Homo_sapiens
MGP_PahariEiJ_G0026919	Ddx20	94	51.319	ENSAPOG00000017383	DDX20	98	51.799	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0026919	Ddx20	98	83.251	ENSAMEG00000005344	DDX20	96	83.965	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0026919	Ddx20	71	61.993	ENSACIG00000013095	ddx20	70	61.993	Amphilophus_citrinellus
MGP_PahariEiJ_G0026919	Ddx20	94	50.420	ENSAOCG00000013474	DDX20	98	51.501	Amphiprion_ocellaris
MGP_PahariEiJ_G0026919	Ddx20	94	50.540	ENSAPEG00000006690	ddx20	98	51.381	Amphiprion_percula
MGP_PahariEiJ_G0026919	Ddx20	94	50.948	ENSATEG00000002941	ddx20	99	51.559	Anabas_testudineus
MGP_PahariEiJ_G0026919	Ddx20	89	49.330	ENSAPLG00000013826	DDX20	99	49.196	Anas_platyrhynchos
MGP_PahariEiJ_G0026919	Ddx20	93	58.397	ENSACAG00000006235	DDX20	98	58.665	Anolis_carolinensis
MGP_PahariEiJ_G0026919	Ddx20	98	82.635	ENSANAG00000037881	DDX20	96	83.712	Aotus_nancymaae
MGP_PahariEiJ_G0026919	Ddx20	73	60.912	ENSACLG00000009485	ddx20	72	60.912	Astatotilapia_calliptera
MGP_PahariEiJ_G0026919	Ddx20	73	59.187	ENSAMXG00000040738	ddx20	81	59.508	Astyanax_mexicanus
MGP_PahariEiJ_G0026919	Ddx20	98	83.211	ENSBTAG00000018717	DDX20	95	84.772	Bos_taurus
MGP_PahariEiJ_G0026919	Ddx20	98	81.650	ENSCJAG00000013428	DDX20	93	82.576	Callithrix_jacchus
MGP_PahariEiJ_G0026919	Ddx20	97	82.447	ENSCAFG00000013674	DDX20	100	82.186	Canis_familiaris
MGP_PahariEiJ_G0026919	Ddx20	99	81.829	ENSCAFG00020008055	DDX20	93	92.903	Canis_lupus_dingo
MGP_PahariEiJ_G0026919	Ddx20	98	83.907	ENSCHIG00000011219	DDX20	95	85.533	Capra_hircus
MGP_PahariEiJ_G0026919	Ddx20	97	84.204	ENSTSYG00000000153	DDX20	96	84.722	Carlito_syrichta
MGP_PahariEiJ_G0026919	Ddx20	83	76.590	ENSCAPG00000017427	DDX20	100	76.590	Cavia_aperea
MGP_PahariEiJ_G0026919	Ddx20	99	80.825	ENSCPOG00000032340	DDX20	95	83.079	Cavia_porcellus
MGP_PahariEiJ_G0026919	Ddx20	99	82.826	ENSCCAG00000026759	DDX20	96	83.838	Cebus_capucinus
MGP_PahariEiJ_G0026919	Ddx20	99	82.588	ENSCATG00000039030	DDX20	96	83.985	Cercocebus_atys
MGP_PahariEiJ_G0026919	Ddx20	99	80.999	ENSCLAG00000008874	DDX20	96	82.576	Chinchilla_lanigera
MGP_PahariEiJ_G0026919	Ddx20	99	82.709	ENSCSAG00000001582	DDX20	96	84.111	Chlorocebus_sabaeus
MGP_PahariEiJ_G0026919	Ddx20	63	85.629	ENSCHOG00000002610	DDX20	78	85.629	Choloepus_hoffmanni
MGP_PahariEiJ_G0026919	Ddx20	93	62.675	ENSCPBG00000021256	DDX20	98	62.723	Chrysemys_picta_bellii
MGP_PahariEiJ_G0026919	Ddx20	99	82.847	ENSCANG00000041894	DDX20	96	84.111	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0026919	Ddx20	98	91.299	ENSCGRG00001014132	Ddx20	99	91.667	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0026919	Ddx20	86	89.861	ENSCGRG00000002300	Ddx20	100	90.278	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0026919	Ddx20	70	54.735	ENSCSEG00000018265	DDX20	73	54.735	Cynoglossus_semilaevis
MGP_PahariEiJ_G0026919	Ddx20	94	49.144	ENSCVAG00000014821	ddx20	99	50.491	Cyprinodon_variegatus
MGP_PahariEiJ_G0026919	Ddx20	70	62.755	ENSDARG00000061204	ddx20	96	52.073	Danio_rerio
MGP_PahariEiJ_G0026919	Ddx20	98	84.029	ENSDNOG00000030865	DDX20	96	84.596	Dasypus_novemcinctus
MGP_PahariEiJ_G0026919	Ddx20	98	84.710	ENSDORG00000011660	Ddx20	96	86.097	Dipodomys_ordii
MGP_PahariEiJ_G0026919	Ddx20	61	95.213	ENSETEG00000002726	DDX20	63	93.264	Echinops_telfairi
MGP_PahariEiJ_G0026919	Ddx20	98	83.990	ENSEASG00005005454	DDX20	96	84.596	Equus_asinus_asinus
MGP_PahariEiJ_G0026919	Ddx20	98	84.113	ENSECAG00000013565	DDX20	96	84.722	Equus_caballus
MGP_PahariEiJ_G0026919	Ddx20	94	48.659	ENSELUG00000010260	ddx20	99	49.029	Esox_lucius
MGP_PahariEiJ_G0026919	Ddx20	98	83.744	ENSFCAG00000025736	DDX20	96	84.703	Felis_catus
MGP_PahariEiJ_G0026919	Ddx20	87	57.260	ENSFALG00000000666	DDX20	99	57.143	Ficedula_albicollis
MGP_PahariEiJ_G0026919	Ddx20	99	76.905	ENSFDAG00000001140	DDX20	96	78.061	Fukomys_damarensis
MGP_PahariEiJ_G0026919	Ddx20	94	52.475	ENSFHEG00000019742	ddx20	99	52.351	Fundulus_heteroclitus
MGP_PahariEiJ_G0026919	Ddx20	93	60.411	ENSGALG00000001504	DDX20	99	60.385	Gallus_gallus
MGP_PahariEiJ_G0026919	Ddx20	94	52.750	ENSGAFG00000006427	ddx20	99	51.788	Gambusia_affinis
MGP_PahariEiJ_G0026919	Ddx20	93	63.439	ENSGAGG00000000130	DDX20	99	63.567	Gopherus_agassizii
MGP_PahariEiJ_G0026919	Ddx20	99	82.704	ENSGGOG00000015576	DDX20	96	83.838	Gorilla_gorilla
MGP_PahariEiJ_G0026919	Ddx20	73	60.912	ENSHBUG00000007853	ddx20	99	51.251	Haplochromis_burtoni
MGP_PahariEiJ_G0026919	Ddx20	99	81.098	ENSHGLG00000014848	DDX20	95	82.846	Heterocephalus_glaber_female
MGP_PahariEiJ_G0026919	Ddx20	99	81.098	ENSHGLG00100003740	DDX20	95	82.846	Heterocephalus_glaber_male
MGP_PahariEiJ_G0026919	Ddx20	94	51.295	ENSHCOG00000001915	ddx20	99	51.046	Hippocampus_comes
MGP_PahariEiJ_G0026919	Ddx20	69	61.880	ENSIPUG00000004876	ddx20	99	50.421	Ictalurus_punctatus
MGP_PahariEiJ_G0026919	Ddx20	98	84.360	ENSSTOG00000029089	DDX20	96	85.480	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0026919	Ddx20	99	85.140	ENSJJAG00000011198	Ddx20	96	85.859	Jaculus_jaculus
MGP_PahariEiJ_G0026919	Ddx20	94	51.295	ENSKMAG00000019022	ddx20	99	51.295	Kryptolebias_marmoratus
MGP_PahariEiJ_G0026919	Ddx20	95	50.362	ENSLBEG00000019194	ddx20	97	50.905	Labrus_bergylta
MGP_PahariEiJ_G0026919	Ddx20	94	55.340	ENSLACG00000018491	DDX20	99	56.967	Latimeria_chalumnae
MGP_PahariEiJ_G0026919	Ddx20	94	54.412	ENSLOCG00000010372	ddx20	73	65.464	Lepisosteus_oculatus
MGP_PahariEiJ_G0026919	Ddx20	98	79.038	ENSLAFG00000014646	DDX20	97	81.210	Loxodonta_africana
MGP_PahariEiJ_G0026919	Ddx20	99	82.950	ENSMFAG00000031755	DDX20	96	84.237	Macaca_fascicularis
MGP_PahariEiJ_G0026919	Ddx20	99	82.968	ENSMNEG00000005757	DDX20	96	84.237	Macaca_nemestrina
MGP_PahariEiJ_G0026919	Ddx20	97	83.478	ENSMLEG00000005722	DDX20	96	83.985	Mandrillus_leucophaeus
MGP_PahariEiJ_G0026919	Ddx20	94	50.605	ENSMAMG00000009654	ddx20	72	60.956	Mastacembelus_armatus
MGP_PahariEiJ_G0026919	Ddx20	73	60.912	ENSMZEG00005027081	ddx20	99	51.691	Maylandia_zebra
MGP_PahariEiJ_G0026919	Ddx20	91	59.331	ENSMGAG00000004624	DDX20	99	59.073	Meleagris_gallopavo
MGP_PahariEiJ_G0026919	Ddx20	98	90.686	ENSMAUG00000010659	Ddx20	96	91.310	Mesocricetus_auratus
MGP_PahariEiJ_G0026919	Ddx20	99	84.409	ENSMICG00000011509	DDX20	96	85.227	Microcebus_murinus
MGP_PahariEiJ_G0026919	Ddx20	98	89.216	ENSMOCG00000012954	Ddx20	96	89.798	Microtus_ochrogaster
MGP_PahariEiJ_G0026919	Ddx20	94	51.000	ENSMMOG00000013103	ddx20	99	50.805	Mola_mola
MGP_PahariEiJ_G0026919	Ddx20	98	72.236	ENSMODG00000001311	DDX20	95	73.731	Monodelphis_domestica
MGP_PahariEiJ_G0026919	Ddx20	99	96.723	MGP_CAROLIEiJ_G0025474	Ddx20	99	96.723	Mus_caroli
MGP_PahariEiJ_G0026919	Ddx20	98	95.823	ENSMUSG00000027905	Ddx20	99	95.823	Mus_musculus
MGP_PahariEiJ_G0026919	Ddx20	98	96.069	MGP_SPRETEiJ_G0026423	Ddx20	99	96.069	Mus_spretus
MGP_PahariEiJ_G0026919	Ddx20	98	83.621	ENSMPUG00000004921	DDX20	95	84.968	Mustela_putorius_furo
MGP_PahariEiJ_G0026919	Ddx20	83	79.480	ENSMLUG00000009676	DDX20	100	79.480	Myotis_lucifugus
MGP_PahariEiJ_G0026919	Ddx20	99	85.732	ENSNGAG00000022953	Ddx20	96	86.473	Nannospalax_galili
MGP_PahariEiJ_G0026919	Ddx20	94	51.758	ENSNBRG00000020244	ddx20	99	51.636	Neolamprologus_brichardi
MGP_PahariEiJ_G0026919	Ddx20	99	83.557	ENSNLEG00000004040	DDX20	96	84.596	Nomascus_leucogenys
MGP_PahariEiJ_G0026919	Ddx20	61	76.546	ENSMEUG00000013459	-	61	78.378	Notamacropus_eugenii
MGP_PahariEiJ_G0026919	Ddx20	66	91.176	ENSOPRG00000004035	DDX20	79	94.737	Ochotona_princeps
MGP_PahariEiJ_G0026919	Ddx20	71	62.881	ENSONIG00000012436	ddx20	99	53.300	Oreochromis_niloticus
MGP_PahariEiJ_G0026919	Ddx20	70	73.424	ENSOANG00000003318	DDX20	99	68.923	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0026919	Ddx20	99	81.432	ENSOCUG00000025939	DDX20	96	83.838	Oryctolagus_cuniculus
MGP_PahariEiJ_G0026919	Ddx20	94	52.494	ENSORLG00000008949	ddx20	99	52.434	Oryzias_latipes
MGP_PahariEiJ_G0026919	Ddx20	94	52.525	ENSORLG00020003852	ddx20	99	52.310	Oryzias_latipes_hni
MGP_PahariEiJ_G0026919	Ddx20	94	52.778	ENSORLG00015020167	ddx20	99	52.559	Oryzias_latipes_hsok
MGP_PahariEiJ_G0026919	Ddx20	94	51.064	ENSOMEG00000013657	ddx20	99	51.815	Oryzias_melastigma
MGP_PahariEiJ_G0026919	Ddx20	99	84.204	ENSOGAG00000010503	DDX20	96	85.246	Otolemur_garnettii
MGP_PahariEiJ_G0026919	Ddx20	98	83.946	ENSOARG00000019651	DDX20	95	85.570	Ovis_aries
MGP_PahariEiJ_G0026919	Ddx20	99	82.460	ENSPPAG00000031680	DDX20	96	83.586	Pan_paniscus
MGP_PahariEiJ_G0026919	Ddx20	98	84.029	ENSPPRG00000022979	DDX20	96	84.956	Panthera_pardus
MGP_PahariEiJ_G0026919	Ddx20	99	82.460	ENSPTRG00000001105	DDX20	96	83.460	Pan_troglodytes
MGP_PahariEiJ_G0026919	Ddx20	99	82.709	ENSPANG00000017985	DDX20	96	84.111	Papio_anubis
MGP_PahariEiJ_G0026919	Ddx20	67	62.703	ENSPKIG00000020161	ddx20	99	51.804	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0026919	Ddx20	87	59.754	ENSPSIG00000003636	DDX20	100	59.754	Pelodiscus_sinensis
MGP_PahariEiJ_G0026919	Ddx20	94	51.677	ENSPMGG00000005966	ddx20	99	51.553	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0026919	Ddx20	98	91.656	ENSPEMG00000019595	Ddx20	96	92.298	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0026919	Ddx20	98	71.551	ENSPCIG00000027721	DDX20	96	73.072	Phascolarctos_cinereus
MGP_PahariEiJ_G0026919	Ddx20	94	52.716	ENSPFOG00000010540	ddx20	99	52.840	Poecilia_formosa
MGP_PahariEiJ_G0026919	Ddx20	94	53.117	ENSPLAG00000009925	ddx20	99	52.826	Poecilia_latipinna
MGP_PahariEiJ_G0026919	Ddx20	94	53.242	ENSPMEG00000005998	ddx20	99	53.367	Poecilia_mexicana
MGP_PahariEiJ_G0026919	Ddx20	94	53.258	ENSPREG00000018837	ddx20	99	53.266	Poecilia_reticulata
MGP_PahariEiJ_G0026919	Ddx20	99	83.069	ENSPPYG00000001026	DDX20	96	84.343	Pongo_abelii
MGP_PahariEiJ_G0026919	Ddx20	99	83.435	ENSPCOG00000025185	DDX20	96	84.470	Propithecus_coquereli
MGP_PahariEiJ_G0026919	Ddx20	99	83.415	ENSPVAG00000004664	DDX20	96	84.091	Pteropus_vampyrus
MGP_PahariEiJ_G0026919	Ddx20	73	60.912	ENSPNYG00000014433	ddx20	72	60.912	Pundamilia_nyererei
MGP_PahariEiJ_G0026919	Ddx20	72	59.967	ENSPNAG00000018148	ddx20	72	59.967	Pygocentrus_nattereri
MGP_PahariEiJ_G0026919	Ddx20	99	92.570	ENSRNOG00000015274	Ddx20	96	93.308	Rattus_norvegicus
MGP_PahariEiJ_G0026919	Ddx20	99	82.709	ENSRBIG00000030629	DDX20	96	83.985	Rhinopithecus_bieti
MGP_PahariEiJ_G0026919	Ddx20	99	82.709	ENSRROG00000030608	DDX20	96	83.985	Rhinopithecus_roxellana
MGP_PahariEiJ_G0026919	Ddx20	99	82.948	ENSSBOG00000024789	DDX20	96	83.965	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0026919	Ddx20	83	71.079	ENSSHAG00000014518	DDX20	99	71.079	Sarcophilus_harrisii
MGP_PahariEiJ_G0026919	Ddx20	94	52.253	ENSSFOG00015008354	ddx20	72	63.193	Scleropages_formosus
MGP_PahariEiJ_G0026919	Ddx20	75	61.962	ENSSMAG00000007498	ddx20	80	62.912	Scophthalmus_maximus
MGP_PahariEiJ_G0026919	Ddx20	94	53.141	ENSSDUG00000015980	ddx20	98	53.509	Seriola_dumerili
MGP_PahariEiJ_G0026919	Ddx20	94	49.701	ENSSLDG00000000437	ddx20	92	51.199	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0026919	Ddx20	87	70.401	ENSSARG00000013569	DDX20	88	70.401	Sorex_araneus
MGP_PahariEiJ_G0026919	Ddx20	94	50.119	ENSSPAG00000020022	ddx20	68	61.564	Stegastes_partitus
MGP_PahariEiJ_G0026919	Ddx20	98	83.272	ENSSSCG00000006783	DDX20	95	84.772	Sus_scrofa
MGP_PahariEiJ_G0026919	Ddx20	79	64.307	ENSTGUG00000013660	DDX20	85	69.060	Taeniopygia_guttata
MGP_PahariEiJ_G0026919	Ddx20	70	60.034	ENSTRUG00000023712	ddx20	71	60.825	Takifugu_rubripes
MGP_PahariEiJ_G0026919	Ddx20	94	50.494	ENSTNIG00000019425	ddx20	99	50.311	Tetraodon_nigroviridis
MGP_PahariEiJ_G0026919	Ddx20	83	84.865	ENSTTRG00000005131	DDX20	79	93.333	Tursiops_truncatus
MGP_PahariEiJ_G0026919	Ddx20	98	80.296	ENSUAMG00000018924	DDX20	96	82.197	Ursus_americanus
MGP_PahariEiJ_G0026919	Ddx20	87	82.759	ENSUMAG00000013897	DDX20	92	82.759	Ursus_maritimus
MGP_PahariEiJ_G0026919	Ddx20	98	82.678	ENSVPAG00000010031	DDX20	95	84.137	Vicugna_pacos
MGP_PahariEiJ_G0026919	Ddx20	99	82.561	ENSVVUG00000016236	DDX20	96	83.312	Vulpes_vulpes
MGP_PahariEiJ_G0026919	Ddx20	93	56.722	ENSXETG00000013568	ddx20	100	56.616	Xenopus_tropicalis
MGP_PahariEiJ_G0026919	Ddx20	94	51.995	ENSXCOG00000007952	ddx20	97	52.060	Xiphophorus_couchianus
MGP_PahariEiJ_G0026919	Ddx20	94	52.244	ENSXMAG00000007573	ddx20	99	52.956	Xiphophorus_maculatus