EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0027060 (Gene tree)
Gene ID: 110320112
Gene Symbol: -
Alias: -
Full Name: La ribonucleoprotein domain family member 7
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 16383 bases
Position: chr4:115640643-115657025
Accession: 110320112
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0071344	RRM_1	PF00076.22	2.2e-18	1	1
MGP_PahariEiJ_P0071344	RRM_3	PF08777.11	1.5e-29	1	1
MGP_PahariEiJ_P0071344	La	PF05383.17	2.1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0071347	-	738	-	-	- (aa)	-	-
MGP_PahariEiJ_T0071344	-	2132	XM_021196032	MGP_PahariEiJ_P0071344	571 (aa)	XP_021051691	-
MGP_PahariEiJ_T0071345	-	1323	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0027060's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0027060's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0027060	-	96	81.688	ENSG00000174720	LARP7	95	81.588	Homo_sapiens
MGP_PahariEiJ_G0027060	-	100	79.760	ENSAMEG00000015642	LARP7	95	81.374	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0027060	-	99	68.833	ENSAPLG00000012887	LARP7	94	68.126	Anas_platyrhynchos
MGP_PahariEiJ_G0027060	-	96	67.914	ENSACAG00000010662	LARP7	91	67.621	Anolis_carolinensis
MGP_PahariEiJ_G0027060	-	96	66.187	ENSANAG00000022318	-	94	66.365	Aotus_nancymaae
MGP_PahariEiJ_G0027060	-	96	81.004	ENSANAG00000031139	-	95	80.901	Aotus_nancymaae
MGP_PahariEiJ_G0027060	-	98	51.613	ENSACLG00000023184	larp7	95	52.941	Astatotilapia_calliptera
MGP_PahariEiJ_G0027060	-	99	52.586	ENSAMXG00000002549	larp7	94	52.679	Astyanax_mexicanus
MGP_PahariEiJ_G0027060	-	100	80.034	ENSBTAG00000009632	LARP7	100	77.296	Bos_taurus
MGP_PahariEiJ_G0027060	-	96	82.554	ENSCJAG00000003711	LARP7	95	82.459	Callithrix_jacchus
MGP_PahariEiJ_G0027060	-	96	79.785	ENSCAFG00000011715	LARP7	100	79.352	Canis_familiaris
MGP_PahariEiJ_G0027060	-	96	80.755	ENSCAFG00020017225	LARP7	100	79.897	Canis_lupus_dingo
MGP_PahariEiJ_G0027060	-	96	81.622	ENSCHIG00000014163	-	100	80.723	Capra_hircus
MGP_PahariEiJ_G0027060	-	100	68.467	ENSCHIG00000013971	-	88	90.099	Capra_hircus
MGP_PahariEiJ_G0027060	-	96	73.723	ENSTSYG00000035188	-	97	73.260	Carlito_syrichta
MGP_PahariEiJ_G0027060	-	90	81.888	ENSTSYG00000006769	-	100	81.284	Carlito_syrichta
MGP_PahariEiJ_G0027060	-	100	72.727	ENSCAPG00000009328	LARP7	100	72.552	Cavia_aperea
MGP_PahariEiJ_G0027060	-	100	80.769	ENSCPOG00000011830	LARP7	100	80.594	Cavia_porcellus
MGP_PahariEiJ_G0027060	-	96	74.908	ENSCCAG00000023563	-	100	74.908	Cebus_capucinus
MGP_PahariEiJ_G0027060	-	96	82.437	ENSCCAG00000026787	-	95	82.342	Cebus_capucinus
MGP_PahariEiJ_G0027060	-	96	81.655	ENSCATG00000043535	LARP7	100	80.103	Cercocebus_atys
MGP_PahariEiJ_G0027060	-	100	83.042	ENSCLAG00000005894	LARP7	100	83.042	Chinchilla_lanigera
MGP_PahariEiJ_G0027060	-	96	81.835	ENSCSAG00000003810	LARP7	100	80.274	Chlorocebus_sabaeus
MGP_PahariEiJ_G0027060	-	100	79.102	ENSCHOG00000002379	-	100	79.793	Choloepus_hoffmanni
MGP_PahariEiJ_G0027060	-	93	71.771	ENSCHOG00000008967	-	100	71.587	Choloepus_hoffmanni
MGP_PahariEiJ_G0027060	-	96	68.838	ENSCPBG00000004919	LARP7	96	70.318	Chrysemys_picta_bellii
MGP_PahariEiJ_G0027060	-	77	36.970	ENSCING00000021685	-	74	36.478	Ciona_intestinalis
MGP_PahariEiJ_G0027060	-	96	81.867	ENSCANG00000031482	LARP7	99	80.308	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0027060	-	90	81.081	ENSCGRG00001012747	-	99	81.467	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0027060	-	100	91.958	ENSCGRG00001025050	-	100	91.783	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0027060	-	96	82.149	ENSCGRG00000007642	-	99	82.514	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0027060	-	95	84.489	ENSCGRG00000001141	-	100	83.942	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0027060	-	96	54.352	ENSCVAG00000016852	larp7	78	73.333	Cyprinodon_variegatus
MGP_PahariEiJ_G0027060	-	100	79.145	ENSDNOG00000013761	LARP7	100	80.342	Dasypus_novemcinctus
MGP_PahariEiJ_G0027060	-	96	84.335	ENSDORG00000008896	-	95	83.002	Dipodomys_ordii
MGP_PahariEiJ_G0027060	-	96	78.198	ENSETEG00000011692	LARP7	95	77.355	Echinops_telfairi
MGP_PahariEiJ_G0027060	-	100	80.822	ENSEASG00005005592	LARP7	95	82.640	Equus_asinus_asinus
MGP_PahariEiJ_G0027060	-	100	80.822	ENSECAG00000000834	LARP7	95	82.640	Equus_caballus
MGP_PahariEiJ_G0027060	-	92	79.048	ENSEEUG00000012824	LARP7	100	77.677	Erinaceus_europaeus
MGP_PahariEiJ_G0027060	-	98	53.401	ENSELUG00000015341	larp7	92	72.864	Esox_lucius
MGP_PahariEiJ_G0027060	-	96	81.982	ENSFCAG00000031966	LARP7	95	81.884	Felis_catus
MGP_PahariEiJ_G0027060	-	99	69.661	ENSFALG00000000972	LARP7	92	68.627	Ficedula_albicollis
MGP_PahariEiJ_G0027060	-	100	74.913	ENSFDAG00000011855	-	100	74.913	Fukomys_damarensis
MGP_PahariEiJ_G0027060	-	96	83.060	ENSFDAG00000014048	-	100	81.469	Fukomys_damarensis
MGP_PahariEiJ_G0027060	-	96	69.788	ENSGALG00000012048	LARP7	94	67.730	Gallus_gallus
MGP_PahariEiJ_G0027060	-	99	51.495	ENSGACG00000019618	larp7	79	71.111	Gasterosteus_aculeatus
MGP_PahariEiJ_G0027060	-	96	68.118	ENSGAGG00000024520	LARP7	95	69.580	Gopherus_agassizii
MGP_PahariEiJ_G0027060	-	87	78.107	ENSGGOG00000006438	-	97	78.107	Gorilla_gorilla
MGP_PahariEiJ_G0027060	-	96	81.688	ENSGGOG00000023567	-	95	81.588	Gorilla_gorilla
MGP_PahariEiJ_G0027060	-	98	51.613	ENSHBUG00000019223	larp7	95	53.298	Haplochromis_burtoni
MGP_PahariEiJ_G0027060	-	96	80.790	ENSHGLG00000002716	LARP7	100	79.655	Heterocephalus_glaber_female
MGP_PahariEiJ_G0027060	-	96	80.790	ENSHGLG00100000332	LARP7	100	79.655	Heterocephalus_glaber_male
MGP_PahariEiJ_G0027060	-	97	53.596	ENSIPUG00000019886	larp7	94	52.456	Ictalurus_punctatus
MGP_PahariEiJ_G0027060	-	100	81.067	ENSSTOG00000011789	LARP7	100	82.444	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0027060	-	100	84.375	ENSJJAG00000000257	-	100	84.722	Jaculus_jaculus
MGP_PahariEiJ_G0027060	-	99	52.151	ENSKMAG00000005057	larp7	95	51.155	Kryptolebias_marmoratus
MGP_PahariEiJ_G0027060	-	98	52.650	ENSLBEG00000020062	larp7	95	52.837	Labrus_bergylta
MGP_PahariEiJ_G0027060	-	99	58.696	ENSLACG00000013744	LARP7	95	59.099	Latimeria_chalumnae
MGP_PahariEiJ_G0027060	-	96	48.625	ENSLOCG00000011608	larp7	95	48.359	Lepisosteus_oculatus
MGP_PahariEiJ_G0027060	-	100	81.724	ENSLAFG00000015769	LARP7	100	81.724	Loxodonta_africana
MGP_PahariEiJ_G0027060	-	96	81.655	ENSMFAG00000036506	LARP7	100	80.103	Macaca_fascicularis
MGP_PahariEiJ_G0027060	-	96	81.655	ENSMMUG00000017911	LARP7	100	80.103	Macaca_mulatta
MGP_PahariEiJ_G0027060	-	96	81.835	ENSMNEG00000034758	LARP7	100	80.274	Macaca_nemestrina
MGP_PahariEiJ_G0027060	-	96	81.835	ENSMLEG00000026154	LARP7	100	80.274	Mandrillus_leucophaeus
MGP_PahariEiJ_G0027060	-	98	51.613	ENSMZEG00005002084	larp7	95	52.941	Maylandia_zebra
MGP_PahariEiJ_G0027060	-	96	70.036	ENSMGAG00000010947	LARP7	95	70.471	Meleagris_gallopavo
MGP_PahariEiJ_G0027060	-	100	75.087	ENSMAUG00000005625	-	100	74.913	Mesocricetus_auratus
MGP_PahariEiJ_G0027060	-	96	83.094	ENSMICG00000031035	LARP7	95	83.002	Microcebus_murinus
MGP_PahariEiJ_G0027060	-	89	89.432	ENSMOCG00000015761	-	100	88.845	Microtus_ochrogaster
MGP_PahariEiJ_G0027060	-	100	92.147	ENSMOCG00000012519	-	100	91.667	Microtus_ochrogaster
MGP_PahariEiJ_G0027060	-	99	71.622	ENSMODG00000005669	LARP7	100	71.622	Monodelphis_domestica
MGP_PahariEiJ_G0027060	-	100	97.378	MGP_CAROLIEiJ_G0025613	-	100	97.378	Mus_caroli
MGP_PahariEiJ_G0027060	-	100	97.552	ENSMUSG00000027968	Larp7	100	97.552	Mus_musculus
MGP_PahariEiJ_G0027060	-	100	97.557	MGP_SPRETEiJ_G0026566	Larp7	100	97.557	Mus_spretus
MGP_PahariEiJ_G0027060	-	95	78.860	ENSMPUG00000018052	-	100	78.860	Mustela_putorius_furo
MGP_PahariEiJ_G0027060	-	96	81.655	ENSMPUG00000008331	-	100	80.928	Mustela_putorius_furo
MGP_PahariEiJ_G0027060	-	87	74.802	ENSMLUG00000027214	LARP7	100	74.802	Myotis_lucifugus
MGP_PahariEiJ_G0027060	-	100	82.931	ENSNGAG00000007368	-	100	83.448	Nannospalax_galili
MGP_PahariEiJ_G0027060	-	96	82.014	ENSNLEG00000016354	LARP7	94	81.555	Nomascus_leucogenys
MGP_PahariEiJ_G0027060	-	88	71.624	ENSMEUG00000004739	LARP7	100	71.233	Notamacropus_eugenii
MGP_PahariEiJ_G0027060	-	85	85.714	ENSOPRG00000009594	-	87	85.714	Ochotona_princeps
MGP_PahariEiJ_G0027060	-	96	78.766	ENSODEG00000011121	LARP7	98	78.766	Octodon_degus
MGP_PahariEiJ_G0027060	-	96	51.468	ENSONIG00000008763	larp7	95	52.941	Oreochromis_niloticus
MGP_PahariEiJ_G0027060	-	99	73.232	ENSOANG00000009298	LARP7	99	73.232	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0027060	-	100	78.731	ENSOCUG00000007073	LARP7	100	78.559	Oryctolagus_cuniculus
MGP_PahariEiJ_G0027060	-	96	52.813	ENSORLG00000004978	larp7	94	52.737	Oryzias_latipes
MGP_PahariEiJ_G0027060	-	96	52.995	ENSORLG00020013825	larp7	94	52.920	Oryzias_latipes_hni
MGP_PahariEiJ_G0027060	-	96	83.333	ENSOGAG00000001643	LARP7	95	83.243	Otolemur_garnettii
MGP_PahariEiJ_G0027060	-	96	81.541	ENSOARG00000001809	LARP7	100	80.651	Ovis_aries
MGP_PahariEiJ_G0027060	-	96	81.329	ENSPPAG00000038420	LARP7	94	81.227	Pan_paniscus
MGP_PahariEiJ_G0027060	-	96	81.835	ENSPPRG00000023256	LARP7	95	81.736	Panthera_pardus
MGP_PahariEiJ_G0027060	-	92	81.015	ENSPTIG00000021146	LARP7	92	80.907	Panthera_tigris_altaica
MGP_PahariEiJ_G0027060	-	96	81.688	ENSPTRG00000016380	LARP7	95	81.588	Pan_troglodytes
MGP_PahariEiJ_G0027060	-	96	82.079	ENSPANG00000006701	LARP7	99	80.513	Papio_anubis
MGP_PahariEiJ_G0027060	-	97	56.522	ENSPKIG00000023484	larp7	94	54.255	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0027060	-	99	68.322	ENSPSIG00000014419	LARP7	93	68.996	Pelodiscus_sinensis
MGP_PahariEiJ_G0027060	-	100	89.761	ENSPEMG00000013978	-	100	89.932	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0027060	-	100	71.572	ENSPCIG00000020284	LARP7	98	80.672	Phascolarctos_cinereus
MGP_PahariEiJ_G0027060	-	99	53.368	ENSPFOG00000000265	larp7	94	51.737	Poecilia_formosa
MGP_PahariEiJ_G0027060	-	99	53.173	ENSPLAG00000012181	larp7	94	51.737	Poecilia_latipinna
MGP_PahariEiJ_G0027060	-	99	53.173	ENSPMEG00000007182	larp7	94	51.737	Poecilia_mexicana
MGP_PahariEiJ_G0027060	-	96	82.047	ENSPPYG00000015010	LARP7	95	81.949	Pongo_abelii
MGP_PahariEiJ_G0027060	-	59	100.000	ENSPCAG00000003373	-	67	100.000	Procavia_capensis
MGP_PahariEiJ_G0027060	-	92	68.451	ENSPCOG00000023946	LARP7	94	72.692	Propithecus_coquereli
MGP_PahariEiJ_G0027060	-	100	78.462	ENSPVAG00000000282	LARP7	100	78.253	Pteropus_vampyrus
MGP_PahariEiJ_G0027060	-	96	53.097	ENSPNAG00000017554	larp7	94	52.151	Pygocentrus_nattereri
MGP_PahariEiJ_G0027060	-	100	91.972	ENSRNOG00000048989	Larp7	100	92.308	Rattus_norvegicus
MGP_PahariEiJ_G0027060	-	82	92.593	ENSRBIG00000031916	LARP7	99	92.593	Rhinopithecus_bieti
MGP_PahariEiJ_G0027060	-	96	81.835	ENSRROG00000033414	LARP7	100	80.274	Rhinopithecus_roxellana
MGP_PahariEiJ_G0027060	-	96	61.221	ENSSBOG00000022652	-	95	60.541	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0027060	-	96	82.796	ENSSBOG00000030886	-	99	81.100	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0027060	-	96	72.134	ENSSHAG00000008153	LARP7	95	71.986	Sarcophilus_harrisii
MGP_PahariEiJ_G0027060	-	98	55.806	ENSSFOG00015019344	larp7	94	54.152	Scleropages_formosus
MGP_PahariEiJ_G0027060	-	96	56.351	ENSSMAG00000011296	larp7	99	55.060	Scophthalmus_maximus
MGP_PahariEiJ_G0027060	-	52	74.667	ENSSARG00000000190	-	99	73.203	Sorex_araneus
MGP_PahariEiJ_G0027060	-	96	81.149	ENSSSCG00000009119	LARP7	95	80.866	Sus_scrofa
MGP_PahariEiJ_G0027060	-	99	69.349	ENSTGUG00000001804	LARP7	95	69.910	Taeniopygia_guttata
MGP_PahariEiJ_G0027060	-	98	50.714	ENSTRUG00000004996	larp7	95	51.287	Takifugu_rubripes
MGP_PahariEiJ_G0027060	-	98	47.521	ENSTNIG00000007183	larp7	95	46.942	Tetraodon_nigroviridis
MGP_PahariEiJ_G0027060	-	96	79.317	ENSTBEG00000009188	LARP7	95	79.204	Tupaia_belangeri
MGP_PahariEiJ_G0027060	-	91	78.517	ENSTTRG00000005233	LARP7	100	78.327	Tursiops_truncatus
MGP_PahariEiJ_G0027060	-	96	80.935	ENSUAMG00000000836	LARP7	95	80.832	Ursus_americanus
MGP_PahariEiJ_G0027060	-	95	80.474	ENSUMAG00000002263	LARP7	93	80.367	Ursus_maritimus
MGP_PahariEiJ_G0027060	-	96	81.720	ENSVPAG00000010502	LARP7	95	81.622	Vicugna_pacos
MGP_PahariEiJ_G0027060	-	96	81.115	ENSVVUG00000002274	LARP7	100	80.241	Vulpes_vulpes
MGP_PahariEiJ_G0027060	-	98	62.349	ENSXETG00000024097	larp7	94	60.498	Xenopus_tropicalis
MGP_PahariEiJ_G0027060	-	98	53.405	ENSXCOG00000004883	larp7	83	72.222	Xiphophorus_couchianus