EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0027254 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 7053 bases
Position: chr5:11954387-11961439
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0072325	RRM_1	PF00076.22	1.1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0072325	-	720	-	MGP_PahariEiJ_P0072325	219 (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0027254's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0027254's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0027254	-	99	100.000	MGP_PahariEiJ_G0027255	-	96	100.000
MGP_PahariEiJ_G0027254	-	76	67.553	MGP_PahariEiJ_G0018656	-	99	68.617
MGP_PahariEiJ_G0027254	-	81	67.500	MGP_PahariEiJ_G0018655	-	82	69.048

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0027254	-	84	65.700	ENSG00000183684	ALYREF	81	67.442	Homo_sapiens
MGP_PahariEiJ_G0027254	-	78	55.882	ENSAPOG00000018455	ALYREF	82	58.407	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0027254	-	58	81.746	ENSAMEG00000017463	ALYREF	55	80.882	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0027254	-	61	81.203	ENSACAG00000010526	ALYREF	83	63.850	Anolis_carolinensis
MGP_PahariEiJ_G0027254	-	66	73.469	ENSANAG00000022638	-	59	78.417	Aotus_nancymaae
MGP_PahariEiJ_G0027254	-	81	68.539	ENSANAG00000028229	-	67	65.700	Aotus_nancymaae
MGP_PahariEiJ_G0027254	-	82	66.502	ENSBTAG00000008498	ALYREF	82	68.720	Bos_taurus
MGP_PahariEiJ_G0027254	-	83	65.366	ENSCJAG00000039942	ALYREF	91	64.535	Callithrix_jacchus
MGP_PahariEiJ_G0027254	-	82	65.517	ENSCAFG00000005877	ALYREF	82	67.773	Canis_familiaris
MGP_PahariEiJ_G0027254	-	78	70.286	ENSCAFG00020009815	ALYREF	85	72.222	Canis_lupus_dingo
MGP_PahariEiJ_G0027254	-	82	71.892	ENSCHIG00000017396	ALYREF	77	74.093	Capra_hircus
MGP_PahariEiJ_G0027254	-	64	78.014	ENSTSYG00000002272	ALYREF	63	78.146	Carlito_syrichta
MGP_PahariEiJ_G0027254	-	81	72.678	ENSCPOG00000013710	ALYREF	83	73.575	Cavia_porcellus
MGP_PahariEiJ_G0027254	-	84	67.633	ENSCCAG00000020578	-	91	64.535	Cebus_capucinus
MGP_PahariEiJ_G0027254	-	82	70.556	ENSCCAG00000030237	-	83	70.213	Cebus_capucinus
MGP_PahariEiJ_G0027254	-	84	65.700	ENSCATG00000033169	ALYREF	91	63.953	Cercocebus_atys
MGP_PahariEiJ_G0027254	-	81	68.508	ENSCLAG00000015026	ALYREF	83	70.899	Chinchilla_lanigera
MGP_PahariEiJ_G0027254	-	84	65.700	ENSCSAG00000002216	ALYREF	81	67.442	Chlorocebus_sabaeus
MGP_PahariEiJ_G0027254	-	57	84.000	ENSCANG00000034056	ALYREF	74	81.295	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0027254	-	84	72.340	ENSCGRG00001018191	-	83	72.539	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0027254	-	62	79.259	ENSCGRG00000015871	-	79	71.975	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0027254	-	74	48.889	ENSCSEG00000015438	-	98	48.889	Cynoglossus_semilaevis
MGP_PahariEiJ_G0027254	-	55	83.471	ENSDNOG00000002563	ALYREF	67	73.418	Dasypus_novemcinctus
MGP_PahariEiJ_G0027254	-	57	83.871	ENSDORG00000025849	-	54	81.818	Dipodomys_ordii
MGP_PahariEiJ_G0027254	-	59	82.946	ENSETEG00000016596	ALYREF	74	83.206	Echinops_telfairi
MGP_PahariEiJ_G0027254	-	84	65.700	ENSEASG00005005824	ALYREF	79	72.778	Equus_asinus_asinus
MGP_PahariEiJ_G0027254	-	84	65.700	ENSECAG00000018754	ALYREF	79	72.778	Equus_caballus
MGP_PahariEiJ_G0027254	-	68	61.988	ENSEEUG00000010164	ALYREF	100	64.327	Erinaceus_europaeus
MGP_PahariEiJ_G0027254	-	84	66.184	ENSFCAG00000022549	ALYREF	82	68.372	Felis_catus
MGP_PahariEiJ_G0027254	-	67	74.150	ENSFDAG00000001213	ALYREF	75	73.885	Fukomys_damarensis
MGP_PahariEiJ_G0027254	-	82	63.682	ENSGALG00000007237	ALYREF	82	66.667	Gallus_gallus
MGP_PahariEiJ_G0027254	-	80	57.000	ENSGACG00000013328	ALYREF	81	59.048	Gasterosteus_aculeatus
MGP_PahariEiJ_G0027254	-	81	64.677	ENSGAGG00000008536	ALYREF	82	65.566	Gopherus_agassizii
MGP_PahariEiJ_G0027254	-	84	66.184	ENSGGOG00000013935	ALYREF	91	64.535	Gorilla_gorilla
MGP_PahariEiJ_G0027254	-	82	70.000	ENSHGLG00000008293	ALYREF	91	64.327	Heterocephalus_glaber_female
MGP_PahariEiJ_G0027254	-	56	82.927	ENSHGLG00100006949	ALYREF	56	82.443	Heterocephalus_glaber_male
MGP_PahariEiJ_G0027254	-	83	57.547	ENSHCOG00000015046	ALYREF	80	58.491	Hippocampus_comes
MGP_PahariEiJ_G0027254	-	85	64.593	ENSJJAG00000004134	-	83	66.825	Jaculus_jaculus
MGP_PahariEiJ_G0027254	-	78	60.513	ENSLACG00000005694	ALYREF	82	60.185	Latimeria_chalumnae
MGP_PahariEiJ_G0027254	-	61	82.836	ENSLAFG00000003083	ALYREF	76	81.690	Loxodonta_africana
MGP_PahariEiJ_G0027254	-	84	65.500	ENSMFAG00000001394	ALYREF	81	68.269	Macaca_fascicularis
MGP_PahariEiJ_G0027254	-	84	65.700	ENSMMUG00000012884	ALYREF	91	63.953	Macaca_mulatta
MGP_PahariEiJ_G0027254	-	84	65.700	ENSMNEG00000043666	ALYREF	90	63.636	Macaca_nemestrina
MGP_PahariEiJ_G0027254	-	57	84.000	ENSMLEG00000043353	ALYREF	65	82.707	Mandrillus_leucophaeus
MGP_PahariEiJ_G0027254	-	82	70.000	ENSMAUG00000020552	-	83	70.370	Mesocricetus_auratus
MGP_PahariEiJ_G0027254	-	85	64.762	ENSMICG00000017403	ALYREF	91	63.372	Microcebus_murinus
MGP_PahariEiJ_G0027254	-	82	68.889	ENSMOCG00000016792	-	83	71.053	Microtus_ochrogaster
MGP_PahariEiJ_G0027254	-	81	65.347	ENSMODG00000003030	ALYREF	69	67.453	Monodelphis_domestica
MGP_PahariEiJ_G0027254	-	86	56.502	ENSMALG00000019408	ALYREF	81	58.257	Monopterus_albus
MGP_PahariEiJ_G0027254	-	81	69.663	MGP_CAROLIEiJ_G0014874	Alyref2	81	69.681	Mus_caroli
MGP_PahariEiJ_G0027254	-	81	67.500	MGP_CAROLIEiJ_G0017529	Alyref	82	69.048	Mus_caroli
MGP_PahariEiJ_G0027254	-	83	81.215	ENSMUSG00000117091	AC153137.1	78	81.383	Mus_musculus
MGP_PahariEiJ_G0027254	-	87	82.199	ENSMUSG00000090854	Gm4340	71	82.979	Mus_musculus
MGP_PahariEiJ_G0027254	-	87	81.152	ENSMUSG00000112931	Gm4303	66	81.152	Mus_musculus
MGP_PahariEiJ_G0027254	-	87	80.105	ENSMUSG00000094314	Gm4301	66	80.105	Mus_musculus
MGP_PahariEiJ_G0027254	-	87	82.199	ENSMUSG00000097427	Gm6763	100	82.877	Mus_musculus
MGP_PahariEiJ_G0027254	-	87	82.199	ENSMUSG00000095022	Gm20765	72	82.979	Mus_musculus
MGP_PahariEiJ_G0027254	-	86	82.979	ENSMUSG00000097550	Gm21304	72	82.979	Mus_musculus
MGP_PahariEiJ_G0027254	-	87	81.152	ENSMUSG00000112856	Gm4305	66	81.152	Mus_musculus
MGP_PahariEiJ_G0027254	-	81	71.348	ENSMUSG00000060244	Alyref2	83	71.277	Mus_musculus
MGP_PahariEiJ_G0027254	-	87	81.152	ENSMUSG00000096744	Gm4307	66	81.152	Mus_musculus
MGP_PahariEiJ_G0027254	-	83	82.320	ENSMUSG00000086727	4931428L18Rik	78	82.447	Mus_musculus
MGP_PahariEiJ_G0027254	-	87	82.199	ENSMUSG00000094144	Gm21312	72	82.979	Mus_musculus
MGP_PahariEiJ_G0027254	-	87	81.152	ENSMUSG00000091101	Gm4302	65	81.152	Mus_musculus
MGP_PahariEiJ_G0027254	-	86	82.979	ENSMUSG00000091779	Gm21293	72	82.979	Mus_musculus
MGP_PahariEiJ_G0027254	-	87	82.199	ENSMUSG00000097878	Gm8764	100	82.877	Mus_musculus
MGP_PahariEiJ_G0027254	-	87	80.105	ENSMUSG00000096640	Gm4312	66	80.105	Mus_musculus
MGP_PahariEiJ_G0027254	-	81	67.500	ENSMUSG00000025134	Alyref	82	69.048	Mus_musculus
MGP_PahariEiJ_G0027254	-	81	67.500	MGP_SPRETEiJ_G0018373	Alyref	82	69.048	Mus_spretus
MGP_PahariEiJ_G0027254	-	81	70.225	MGP_SPRETEiJ_G0015679	Alyref2	83	70.213	Mus_spretus
MGP_PahariEiJ_G0027254	-	59	82.171	MGP_SPRETEiJ_G0016590	-	57	82.171	Mus_spretus
MGP_PahariEiJ_G0027254	-	71	53.107	ENSMLUG00000023213	-	69	51.648	Myotis_lucifugus
MGP_PahariEiJ_G0027254	-	81	64.835	ENSMLUG00000027516	-	65	65.285	Myotis_lucifugus
MGP_PahariEiJ_G0027254	-	82	58.333	ENSMLUG00000015043	-	78	59.043	Myotis_lucifugus
MGP_PahariEiJ_G0027254	-	79	53.571	ENSMLUG00000002626	-	84	52.315	Myotis_lucifugus
MGP_PahariEiJ_G0027254	-	82	59.444	ENSMLUG00000024471	-	64	60.106	Myotis_lucifugus
MGP_PahariEiJ_G0027254	-	86	59.686	ENSMLUG00000026271	-	66	60.733	Myotis_lucifugus
MGP_PahariEiJ_G0027254	-	61	70.149	ENSMLUG00000024976	-	66	61.780	Myotis_lucifugus
MGP_PahariEiJ_G0027254	-	82	59.444	ENSMLUG00000022869	-	66	60.317	Myotis_lucifugus
MGP_PahariEiJ_G0027254	-	82	59.669	ENSMLUG00000025677	-	62	59.788	Myotis_lucifugus
MGP_PahariEiJ_G0027254	-	82	57.459	ENSMLUG00000030407	-	62	58.201	Myotis_lucifugus
MGP_PahariEiJ_G0027254	-	58	65.354	ENSMLUG00000028343	-	67	65.000	Myotis_lucifugus
MGP_PahariEiJ_G0027254	-	86	61.170	ENSMLUG00000024447	-	63	61.170	Myotis_lucifugus
MGP_PahariEiJ_G0027254	-	57	82.258	ENSMLUG00000009555	-	50	81.343	Myotis_lucifugus
MGP_PahariEiJ_G0027254	-	82	60.556	ENSMLUG00000027352	-	64	61.170	Myotis_lucifugus
MGP_PahariEiJ_G0027254	-	84	66.184	ENSNLEG00000010313	ALYREF	91	64.535	Nomascus_leucogenys
MGP_PahariEiJ_G0027254	-	81	64.706	ENSODEG00000008359	ALYREF	82	67.290	Octodon_degus
MGP_PahariEiJ_G0027254	-	85	57.692	ENSORLG00000012331	ALYREF	81	60.096	Oryzias_latipes
MGP_PahariEiJ_G0027254	-	69	71.895	ENSOGAG00000012409	ALYREF	66	72.050	Otolemur_garnettii
MGP_PahariEiJ_G0027254	-	56	84.553	ENSOARG00000017932	ALYREF	57	75.484	Ovis_aries
MGP_PahariEiJ_G0027254	-	84	66.184	ENSPPRG00000010829	ALYREF	82	68.372	Panthera_pardus
MGP_PahariEiJ_G0027254	-	56	84.553	ENSPTIG00000006399	ALYREF	73	83.969	Panthera_tigris_altaica
MGP_PahariEiJ_G0027254	-	84	66.184	ENSPTRG00000009774	ALYREF	91	64.535	Pan_troglodytes
MGP_PahariEiJ_G0027254	-	84	65.700	ENSPANG00000019265	ALYREF	91	63.953	Papio_anubis
MGP_PahariEiJ_G0027254	-	84	65.700	ENSPPYG00000008749	ALYREF	81	67.907	Pongo_abelii
MGP_PahariEiJ_G0027254	-	85	64.762	ENSPCOG00000020874	ALYREF	91	63.372	Propithecus_coquereli
MGP_PahariEiJ_G0027254	-	56	83.740	ENSPVAG00000017866	ALYREF	83	60.000	Pteropus_vampyrus
MGP_PahariEiJ_G0027254	-	68	61.850	ENSRNOG00000036687	Alyref	91	64.535	Rattus_norvegicus
MGP_PahariEiJ_G0027254	-	56	84.553	ENSRBIG00000039651	ALYREF	53	83.206	Rhinopithecus_bieti
MGP_PahariEiJ_G0027254	-	72	72.393	ENSRROG00000045364	ALYREF	74	71.212	Rhinopithecus_roxellana
MGP_PahariEiJ_G0027254	-	55	84.298	ENSSHAG00000010459	ALYREF	68	83.969	Sarcophilus_harrisii
MGP_PahariEiJ_G0027254	-	82	50.000	ENSSDUG00000003992	-	75	50.505	Seriola_dumerili
MGP_PahariEiJ_G0027254	-	82	50.000	ENSSLDG00000005386	-	76	50.505	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0027254	-	81	64.356	ENSSPUG00000004600	ALYREF	83	65.258	Sphenodon_punctatus
MGP_PahariEiJ_G0027254	-	78	55.392	ENSSPAG00000011178	ALYREF	78	57.919	Stegastes_partitus
MGP_PahariEiJ_G0027254	-	82	67.327	ENSSSCG00000032655	ALYREF	82	68.571	Sus_scrofa
MGP_PahariEiJ_G0027254	-	86	55.455	ENSTRUG00000008828	ALYREF	82	58.182	Takifugu_rubripes
MGP_PahariEiJ_G0027254	-	55	83.471	ENSTBEG00000005834	ALYREF	74	82.443	Tupaia_belangeri
MGP_PahariEiJ_G0027254	-	82	64.039	ENSTTRG00000012275	ALYREF	82	67.299	Tursiops_truncatus
MGP_PahariEiJ_G0027254	-	85	67.539	ENSXETG00000005391	alyref	80	69.634	Xenopus_tropicalis