EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0027259 (Gene tree)
Gene ID: 110321650
Gene Symbol: Khdrbs2
Alias: 6330586C16Rik|SLM-1
Full Name: KH RNA binding domain containing%2C signal transduction associated 2
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 446095 bases
Position: chr5:12996572-13442666
Accession: 110321650
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0072333	KH_1	PF00013.29	5.4e-09	1	1
MGP_PahariEiJ_P0072335	KH_1	PF00013.29	2.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0072333	-	2277	XM_021198026	MGP_PahariEiJ_P0072333	349 (aa)	XP_021053685	UPI000A30F636
MGP_PahariEiJ_T0072336	-	277	-	-	- (aa)	-	-
MGP_PahariEiJ_T0072334	-	3168	-	MGP_PahariEiJ_P0072334	89 (aa)	-	-
MGP_PahariEiJ_T0072335	-	5025	-	MGP_PahariEiJ_P0072335	120 (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0027259's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0027259's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0027259	Khdrbs2	89	41.176	MGP_PahariEiJ_G0023373	Qk	58	41.053
MGP_PahariEiJ_G0027259	Khdrbs2	92	76.364	MGP_PahariEiJ_G0028866	Khdrbs1	78	61.190
MGP_PahariEiJ_G0027259	Khdrbs2	92	79.091	MGP_PahariEiJ_G0019860	Khdrbs3	99	64.103

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0027259	Khdrbs2	100	95.129	ENSG00000112232	KHDRBS2	100	95.129	Homo_sapiens
MGP_PahariEiJ_G0027259	Khdrbs2	93	78.571	ENSAPOG00000008806	khdrbs2	100	68.182	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0027259	Khdrbs2	93	97.321	ENSAMEG00000007111	KHDRBS2	100	95.556	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0027259	Khdrbs2	93	80.357	ENSACIG00000020525	khdrbs2	100	67.139	Amphilophus_citrinellus
MGP_PahariEiJ_G0027259	Khdrbs2	93	78.571	ENSAOCG00000011333	khdrbs2	100	67.045	Amphiprion_ocellaris
MGP_PahariEiJ_G0027259	Khdrbs2	93	78.571	ENSAPEG00000019843	khdrbs2	99	64.179	Amphiprion_percula
MGP_PahariEiJ_G0027259	Khdrbs2	93	80.357	ENSATEG00000020863	khdrbs2	100	67.521	Anabas_testudineus
MGP_PahariEiJ_G0027259	Khdrbs2	100	90.831	ENSAPLG00000013452	KHDRBS2	100	89.971	Anas_platyrhynchos
MGP_PahariEiJ_G0027259	Khdrbs2	93	94.643	ENSACAG00000006691	KHDRBS2	100	86.533	Anolis_carolinensis
MGP_PahariEiJ_G0027259	Khdrbs2	93	98.214	ENSANAG00000024792	KHDRBS2	99	95.960	Aotus_nancymaae
MGP_PahariEiJ_G0027259	Khdrbs2	93	80.357	ENSACLG00000002710	khdrbs2	100	68.839	Astatotilapia_calliptera
MGP_PahariEiJ_G0027259	Khdrbs2	93	82.143	ENSAMXG00000009582	khdrbs2	89	74.110	Astyanax_mexicanus
MGP_PahariEiJ_G0027259	Khdrbs2	100	90.258	ENSBTAG00000043990	KHDRBS2	100	91.404	Bos_taurus
MGP_PahariEiJ_G0027259	Khdrbs2	100	95.702	ENSCJAG00000001766	KHDRBS2	100	95.702	Callithrix_jacchus
MGP_PahariEiJ_G0027259	Khdrbs2	100	95.129	ENSCAFG00000002470	KHDRBS2	100	95.129	Canis_familiaris
MGP_PahariEiJ_G0027259	Khdrbs2	100	95.129	ENSCAFG00020015926	KHDRBS2	100	95.129	Canis_lupus_dingo
MGP_PahariEiJ_G0027259	Khdrbs2	100	89.685	ENSCHIG00000024242	KHDRBS2	100	89.685	Capra_hircus
MGP_PahariEiJ_G0027259	Khdrbs2	91	95.912	ENSTSYG00000007203	KHDRBS2	91	95.912	Carlito_syrichta
MGP_PahariEiJ_G0027259	Khdrbs2	91	93.082	ENSCPOG00000025621	KHDRBS2	100	93.082	Cavia_porcellus
MGP_PahariEiJ_G0027259	Khdrbs2	93	98.214	ENSCCAG00000037746	KHDRBS2	100	80.802	Cebus_capucinus
MGP_PahariEiJ_G0027259	Khdrbs2	100	95.702	ENSCATG00000042976	KHDRBS2	100	95.702	Cercocebus_atys
MGP_PahariEiJ_G0027259	Khdrbs2	91	94.654	ENSCLAG00000000509	KHDRBS2	100	94.654	Chinchilla_lanigera
MGP_PahariEiJ_G0027259	Khdrbs2	93	98.214	ENSCSAG00000013462	KHDRBS2	98	95.926	Chlorocebus_sabaeus
MGP_PahariEiJ_G0027259	Khdrbs2	100	67.622	ENSCHOG00000013616	KHDRBS2	100	67.335	Choloepus_hoffmanni
MGP_PahariEiJ_G0027259	Khdrbs2	100	92.264	ENSCPBG00000022649	KHDRBS2	100	91.404	Chrysemys_picta_bellii
MGP_PahariEiJ_G0027259	Khdrbs2	100	95.702	ENSCANG00000021348	KHDRBS2	100	95.702	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0027259	Khdrbs2	100	97.708	ENSCGRG00001022657	Khdrbs2	100	97.708	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0027259	Khdrbs2	93	99.107	ENSCGRG00000003079	-	96	97.778	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0027259	Khdrbs2	93	79.464	ENSCSEG00000005064	khdrbs2	100	62.000	Cynoglossus_semilaevis
MGP_PahariEiJ_G0027259	Khdrbs2	93	79.464	ENSCVAG00000020560	khdrbs2	99	82.266	Cyprinodon_variegatus
MGP_PahariEiJ_G0027259	Khdrbs2	93	83.036	ENSDARG00000069469	khdrbs2	100	72.857	Danio_rerio
MGP_PahariEiJ_G0027259	Khdrbs2	100	95.415	ENSDNOG00000014028	KHDRBS2	100	95.415	Dasypus_novemcinctus
MGP_PahariEiJ_G0027259	Khdrbs2	94	85.933	ENSDORG00000005701	Khdrbs2	100	87.107	Dipodomys_ordii
MGP_PahariEiJ_G0027259	Khdrbs2	87	98.077	ENSETEG00000002241	KHDRBS2	100	76.791	Echinops_telfairi
MGP_PahariEiJ_G0027259	Khdrbs2	79	49.324	ENSEBUG00000012421	khdrbs2	99	47.766	Eptatretus_burgeri
MGP_PahariEiJ_G0027259	Khdrbs2	88	60.377	ENSEBUG00000007730	khdrbs2	98	52.288	Eptatretus_burgeri
MGP_PahariEiJ_G0027259	Khdrbs2	99	48.256	ENSEBUG00000007596	khdrbs2	88	50.435	Eptatretus_burgeri
MGP_PahariEiJ_G0027259	Khdrbs2	100	95.129	ENSEASG00005003578	KHDRBS2	100	95.129	Equus_asinus_asinus
MGP_PahariEiJ_G0027259	Khdrbs2	100	94.842	ENSECAG00000021541	KHDRBS2	100	94.842	Equus_caballus
MGP_PahariEiJ_G0027259	Khdrbs2	93	97.321	ENSEEUG00000003986	KHDRBS2	100	93.060	Erinaceus_europaeus
MGP_PahariEiJ_G0027259	Khdrbs2	93	81.250	ENSELUG00000020898	khdrbs2	100	69.429	Esox_lucius
MGP_PahariEiJ_G0027259	Khdrbs2	100	95.415	ENSFCAG00000046207	KHDRBS2	78	95.415	Felis_catus
MGP_PahariEiJ_G0027259	Khdrbs2	91	89.028	ENSFALG00000001691	KHDRBS2	99	89.583	Ficedula_albicollis
MGP_PahariEiJ_G0027259	Khdrbs2	91	84.906	ENSFDAG00000008941	KHDRBS2	100	85.849	Fukomys_damarensis
MGP_PahariEiJ_G0027259	Khdrbs2	81	49.310	ENSFHEG00000021135	khdrbs2	89	48.966	Fundulus_heteroclitus
MGP_PahariEiJ_G0027259	Khdrbs2	93	85.841	ENSGMOG00000005065	khdrbs2	100	61.756	Gadus_morhua
MGP_PahariEiJ_G0027259	Khdrbs2	100	89.398	ENSGALG00000016276	KHDRBS2	100	88.539	Gallus_gallus
MGP_PahariEiJ_G0027259	Khdrbs2	93	80.357	ENSGAFG00000007645	khdrbs2	100	67.045	Gambusia_affinis
MGP_PahariEiJ_G0027259	Khdrbs2	93	78.571	ENSGACG00000006097	khdrbs2	100	66.761	Gasterosteus_aculeatus
MGP_PahariEiJ_G0027259	Khdrbs2	64	84.685	ENSGAGG00000023457	-	78	83.333	Gopherus_agassizii
MGP_PahariEiJ_G0027259	Khdrbs2	100	95.129	ENSGGOG00000025068	KHDRBS2	100	95.129	Gorilla_gorilla
MGP_PahariEiJ_G0027259	Khdrbs2	93	80.357	ENSHBUG00000008029	khdrbs2	100	68.839	Haplochromis_burtoni
MGP_PahariEiJ_G0027259	Khdrbs2	100	91.977	ENSHGLG00000017439	KHDRBS2	100	91.977	Heterocephalus_glaber_female
MGP_PahariEiJ_G0027259	Khdrbs2	100	91.977	ENSHGLG00100003817	KHDRBS2	100	91.977	Heterocephalus_glaber_male
MGP_PahariEiJ_G0027259	Khdrbs2	93	75.893	ENSHCOG00000013857	khdrbs2	100	63.173	Hippocampus_comes
MGP_PahariEiJ_G0027259	Khdrbs2	93	83.929	ENSIPUG00000015437	khdrbs2	100	76.000	Ictalurus_punctatus
MGP_PahariEiJ_G0027259	Khdrbs2	100	95.702	ENSSTOG00000011529	KHDRBS2	100	95.702	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0027259	Khdrbs2	100	94.269	ENSJJAG00000017812	Khdrbs2	100	94.269	Jaculus_jaculus
MGP_PahariEiJ_G0027259	Khdrbs2	93	82.143	ENSKMAG00000018214	khdrbs2	100	69.034	Kryptolebias_marmoratus
MGP_PahariEiJ_G0027259	Khdrbs2	93	78.571	ENSLBEG00000013077	khdrbs2	86	67.429	Labrus_bergylta
MGP_PahariEiJ_G0027259	Khdrbs2	93	89.286	ENSLOCG00000017016	khdrbs2	98	78.286	Lepisosteus_oculatus
MGP_PahariEiJ_G0027259	Khdrbs2	100	95.702	ENSLAFG00000006655	KHDRBS2	100	95.702	Loxodonta_africana
MGP_PahariEiJ_G0027259	Khdrbs2	100	95.702	ENSMFAG00000002823	KHDRBS2	100	95.702	Macaca_fascicularis
MGP_PahariEiJ_G0027259	Khdrbs2	100	95.702	ENSMNEG00000042875	KHDRBS2	100	95.702	Macaca_nemestrina
MGP_PahariEiJ_G0027259	Khdrbs2	93	98.214	ENSMLEG00000022013	KHDRBS2	100	95.926	Mandrillus_leucophaeus
MGP_PahariEiJ_G0027259	Khdrbs2	93	80.357	ENSMAMG00000015552	khdrbs2	100	68.466	Mastacembelus_armatus
MGP_PahariEiJ_G0027259	Khdrbs2	93	79.464	ENSMZEG00005005504	khdrbs2	100	68.272	Maylandia_zebra
MGP_PahariEiJ_G0027259	Khdrbs2	56	97.462	ENSMAUG00000013631	Khdrbs2	72	97.462	Mesocricetus_auratus
MGP_PahariEiJ_G0027259	Khdrbs2	100	95.129	ENSMICG00000010315	KHDRBS2	100	95.129	Microcebus_murinus
MGP_PahariEiJ_G0027259	Khdrbs2	100	97.135	ENSMOCG00000012101	Khdrbs2	100	97.135	Microtus_ochrogaster
MGP_PahariEiJ_G0027259	Khdrbs2	93	79.464	ENSMMOG00000007708	khdrbs2	100	66.193	Mola_mola
MGP_PahariEiJ_G0027259	Khdrbs2	100	91.977	ENSMODG00000018714	KHDRBS2	100	91.977	Monodelphis_domestica
MGP_PahariEiJ_G0027259	Khdrbs2	93	79.464	ENSMALG00000002214	khdrbs2	100	65.909	Monopterus_albus
MGP_PahariEiJ_G0027259	Khdrbs2	100	99.140	MGP_CAROLIEiJ_G0014010	Khdrbs2	100	99.140	Mus_caroli
MGP_PahariEiJ_G0027259	Khdrbs2	100	99.713	ENSMUSG00000026058	Khdrbs2	100	99.713	Mus_musculus
MGP_PahariEiJ_G0027259	Khdrbs2	100	99.713	MGP_SPRETEiJ_G0014814	Khdrbs2	100	99.713	Mus_spretus
MGP_PahariEiJ_G0027259	Khdrbs2	100	95.129	ENSMPUG00000002607	KHDRBS2	100	95.129	Mustela_putorius_furo
MGP_PahariEiJ_G0027259	Khdrbs2	100	94.556	ENSMLUG00000005484	KHDRBS2	100	94.556	Myotis_lucifugus
MGP_PahariEiJ_G0027259	Khdrbs2	93	80.357	ENSNBRG00000013759	khdrbs2	100	68.839	Neolamprologus_brichardi
MGP_PahariEiJ_G0027259	Khdrbs2	91	92.138	ENSODEG00000015927	KHDRBS2	100	92.138	Octodon_degus
MGP_PahariEiJ_G0027259	Khdrbs2	93	80.357	ENSONIG00000009755	khdrbs2	100	68.839	Oreochromis_niloticus
MGP_PahariEiJ_G0027259	Khdrbs2	64	94.805	ENSOANG00000030721	-	99	94.805	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0027259	Khdrbs2	100	94.842	ENSOCUG00000012344	KHDRBS2	100	94.842	Oryctolagus_cuniculus
MGP_PahariEiJ_G0027259	Khdrbs2	93	80.357	ENSORLG00000010165	khdrbs2	100	67.045	Oryzias_latipes
MGP_PahariEiJ_G0027259	Khdrbs2	93	80.357	ENSORLG00020020168	khdrbs2	100	66.761	Oryzias_latipes_hni
MGP_PahariEiJ_G0027259	Khdrbs2	93	79.464	ENSORLG00015003971	khdrbs2	100	66.761	Oryzias_latipes_hsok
MGP_PahariEiJ_G0027259	Khdrbs2	93	80.357	ENSOMEG00000001684	khdrbs2	100	66.477	Oryzias_melastigma
MGP_PahariEiJ_G0027259	Khdrbs2	100	95.129	ENSOGAG00000015071	KHDRBS2	100	95.129	Otolemur_garnettii
MGP_PahariEiJ_G0027259	Khdrbs2	92	96.364	ENSOARG00000005603	KHDRBS2	97	88.462	Ovis_aries
MGP_PahariEiJ_G0027259	Khdrbs2	100	94.842	ENSPPAG00000032651	KHDRBS2	100	94.842	Pan_paniscus
MGP_PahariEiJ_G0027259	Khdrbs2	100	95.702	ENSPPRG00000008147	KHDRBS2	100	95.702	Panthera_pardus
MGP_PahariEiJ_G0027259	Khdrbs2	100	95.702	ENSPTIG00000020547	KHDRBS2	100	95.702	Panthera_tigris_altaica
MGP_PahariEiJ_G0027259	Khdrbs2	100	95.129	ENSPTRG00000018311	KHDRBS2	100	95.129	Pan_troglodytes
MGP_PahariEiJ_G0027259	Khdrbs2	100	95.702	ENSPANG00000021881	KHDRBS2	100	95.702	Papio_anubis
MGP_PahariEiJ_G0027259	Khdrbs2	97	93.966	ENSPSIG00000015682	-	83	93.966	Pelodiscus_sinensis
MGP_PahariEiJ_G0027259	Khdrbs2	93	82.143	ENSPMGG00000008580	khdrbs2	100	66.097	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0027259	Khdrbs2	93	80.357	ENSPFOG00000011638	khdrbs2	100	67.614	Poecilia_formosa
MGP_PahariEiJ_G0027259	Khdrbs2	93	79.464	ENSPLAG00000023478	khdrbs2	100	66.477	Poecilia_latipinna
MGP_PahariEiJ_G0027259	Khdrbs2	93	81.250	ENSPMEG00000011563	khdrbs2	100	67.045	Poecilia_mexicana
MGP_PahariEiJ_G0027259	Khdrbs2	93	79.464	ENSPREG00000022525	khdrbs2	100	67.614	Poecilia_reticulata
MGP_PahariEiJ_G0027259	Khdrbs2	93	98.214	ENSPPYG00000029598	-	97	98.039	Pongo_abelii
MGP_PahariEiJ_G0027259	Khdrbs2	100	82.521	ENSPCAG00000001426	KHDRBS2	100	82.521	Procavia_capensis
MGP_PahariEiJ_G0027259	Khdrbs2	100	82.235	ENSPCOG00000018881	KHDRBS2	100	82.235	Propithecus_coquereli
MGP_PahariEiJ_G0027259	Khdrbs2	93	80.357	ENSPNYG00000019550	khdrbs2	100	68.839	Pundamilia_nyererei
MGP_PahariEiJ_G0027259	Khdrbs2	93	83.929	ENSPNAG00000008598	khdrbs2	99	75.862	Pygocentrus_nattereri
MGP_PahariEiJ_G0027259	Khdrbs2	100	97.994	ENSRNOG00000012284	Khdrbs2	100	97.994	Rattus_norvegicus
MGP_PahariEiJ_G0027259	Khdrbs2	91	94.937	ENSRBIG00000039774	KHDRBS2	99	94.937	Rhinopithecus_bieti
MGP_PahariEiJ_G0027259	Khdrbs2	100	95.415	ENSSBOG00000019779	KHDRBS2	100	95.415	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0027259	Khdrbs2	93	85.714	ENSSFOG00015012491	khdrbs2	100	75.143	Scleropages_formosus
MGP_PahariEiJ_G0027259	Khdrbs2	93	79.464	ENSSMAG00000006422	khdrbs2	89	66.856	Scophthalmus_maximus
MGP_PahariEiJ_G0027259	Khdrbs2	93	81.250	ENSSDUG00000023520	khdrbs2	100	69.516	Seriola_dumerili
MGP_PahariEiJ_G0027259	Khdrbs2	93	81.250	ENSSLDG00000019363	khdrbs2	98	68.857	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0027259	Khdrbs2	93	93.750	ENSSARG00000004121	KHDRBS2	100	73.352	Sorex_araneus
MGP_PahariEiJ_G0027259	Khdrbs2	71	96.471	ENSSPUG00000006155	KHDRBS2	77	89.300	Sphenodon_punctatus
MGP_PahariEiJ_G0027259	Khdrbs2	100	94.556	ENSSSCG00000001490	KHDRBS2	100	94.556	Sus_scrofa
MGP_PahariEiJ_G0027259	Khdrbs2	68	95.122	ENSTGUG00000012786	KHDRBS2	99	88.333	Taeniopygia_guttata
MGP_PahariEiJ_G0027259	Khdrbs2	93	84.821	ENSTRUG00000015760	khdrbs2	100	65.546	Takifugu_rubripes
MGP_PahariEiJ_G0027259	Khdrbs2	93	83.036	ENSTNIG00000016577	khdrbs2	100	83.036	Tetraodon_nigroviridis
MGP_PahariEiJ_G0027259	Khdrbs2	100	93.123	ENSTTRG00000005591	KHDRBS2	100	93.123	Tursiops_truncatus
MGP_PahariEiJ_G0027259	Khdrbs2	100	95.129	ENSUMAG00000018593	KHDRBS2	100	95.129	Ursus_maritimus
MGP_PahariEiJ_G0027259	Khdrbs2	93	96.429	ENSVPAG00000001469	KHDRBS2	100	92.429	Vicugna_pacos
MGP_PahariEiJ_G0027259	Khdrbs2	100	95.129	ENSVVUG00000008652	KHDRBS2	100	95.129	Vulpes_vulpes
MGP_PahariEiJ_G0027259	Khdrbs2	93	91.071	ENSXETG00000004451	khdrbs2	100	72.206	Xenopus_tropicalis
MGP_PahariEiJ_G0027259	Khdrbs2	93	80.357	ENSXMAG00000009415	khdrbs2	100	66.761	Xiphophorus_maculatus