EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0027496 (Gene tree)
Gene ID: 110321277
Gene Symbol: Pnkd
Alias: 2210013N15Rik|2810403H05Rik|Brp17
Full Name: PNKD%2C MBL domain containing
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 69553 bases
Position: chr5:52855396-52924948
Accession: 110321277
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0073578	Lactamase_B	PF00753.27	2.4e-10	1	1
MGP_PahariEiJ_P0073566	Lactamase_B	PF00753.27	2.8e-10	1	1
MGP_PahariEiJ_P0073569	Lactamase_B	PF00753.27	3.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0073579	-	3432	-	-	- (aa)	-	-
MGP_PahariEiJ_T0073578	-	2845	XM_021197475	MGP_PahariEiJ_P0073578	360 (aa)	XP_021053134	UPI000A311DE9
MGP_PahariEiJ_T0073565	-	739	XM_021197476	MGP_PahariEiJ_P0073565	142 (aa)	XP_021053135	UPI000A30AB3E
MGP_PahariEiJ_T0073566	-	2923	XM_021197474	MGP_PahariEiJ_P0073566	385 (aa)	XP_021053133	UPI00006976B2
MGP_PahariEiJ_T0073567	-	879	-	-	- (aa)	-	-
MGP_PahariEiJ_T0073568	-	420	-	-	- (aa)	-	-
MGP_PahariEiJ_T0073569	-	3040	XM_021197473	MGP_PahariEiJ_P0073569	424 (aa)	XP_021053132	UPI00001D9479
MGP_PahariEiJ_T0073570	-	443	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0027496's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0027496's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0027496	Pnkd	63	41.850	MGP_PahariEiJ_G0023566	Haghl	100	41.228
MGP_PahariEiJ_G0027496	Pnkd	66	43.277	MGP_PahariEiJ_G0023524	Hagh	100	43.578

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0027496	Pnkd	100	96.104	ENSG00000127838	PNKD	100	96.104	Homo_sapiens
MGP_PahariEiJ_G0027496	Pnkd	89	62.069	ENSAPOG00000019072	pnkd	97	57.429	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0027496	Pnkd	100	95.844	ENSAMEG00000003089	PNKD	100	95.844	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0027496	Pnkd	97	54.301	ENSACIG00000015359	pnkd	96	54.301	Amphilophus_citrinellus
MGP_PahariEiJ_G0027496	Pnkd	73	64.504	ENSAOCG00000024159	pnkd	91	58.000	Amphiprion_ocellaris
MGP_PahariEiJ_G0027496	Pnkd	89	61.755	ENSAOCG00000011458	-	89	61.755	Amphiprion_ocellaris
MGP_PahariEiJ_G0027496	Pnkd	89	61.755	ENSAPEG00000011710	pnkd	89	61.755	Amphiprion_percula
MGP_PahariEiJ_G0027496	Pnkd	89	61.442	ENSATEG00000002727	pnkd	97	57.267	Anabas_testudineus
MGP_PahariEiJ_G0027496	Pnkd	89	62.187	ENSACAG00000001617	PNKD	99	55.435	Anolis_carolinensis
MGP_PahariEiJ_G0027496	Pnkd	100	96.623	ENSANAG00000019661	PNKD	100	96.623	Aotus_nancymaae
MGP_PahariEiJ_G0027496	Pnkd	95	60.058	ENSACLG00000021665	pnkd	89	62.382	Astatotilapia_calliptera
MGP_PahariEiJ_G0027496	Pnkd	100	58.172	ENSAMXG00000043305	pnkd	90	61.963	Astyanax_mexicanus
MGP_PahariEiJ_G0027496	Pnkd	100	91.111	ENSBTAG00000003936	PNKD	100	91.111	Bos_taurus
MGP_PahariEiJ_G0027496	Pnkd	100	96.623	ENSCJAG00000010820	PNKD	100	96.623	Callithrix_jacchus
MGP_PahariEiJ_G0027496	Pnkd	100	93.766	ENSCAFG00000014632	PNKD	100	93.766	Canis_familiaris
MGP_PahariEiJ_G0027496	Pnkd	100	90.833	ENSCAFG00020027093	PNKD	100	90.833	Canis_lupus_dingo
MGP_PahariEiJ_G0027496	Pnkd	100	95.325	ENSCHIG00000002862	PNKD	100	95.325	Capra_hircus
MGP_PahariEiJ_G0027496	Pnkd	100	96.364	ENSTSYG00000034863	PNKD	100	96.364	Carlito_syrichta
MGP_PahariEiJ_G0027496	Pnkd	100	96.104	ENSCPOG00000020589	PNKD	100	96.104	Cavia_porcellus
MGP_PahariEiJ_G0027496	Pnkd	100	96.364	ENSCCAG00000036713	PNKD	100	96.364	Cebus_capucinus
MGP_PahariEiJ_G0027496	Pnkd	100	96.364	ENSCATG00000041188	PNKD	100	96.364	Cercocebus_atys
MGP_PahariEiJ_G0027496	Pnkd	100	96.883	ENSCLAG00000012048	PNKD	100	96.883	Chinchilla_lanigera
MGP_PahariEiJ_G0027496	Pnkd	100	96.364	ENSCSAG00000008892	PNKD	100	96.364	Chlorocebus_sabaeus
MGP_PahariEiJ_G0027496	Pnkd	100	96.364	ENSCANG00000032283	PNKD	100	96.364	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0027496	Pnkd	100	98.701	ENSCGRG00001024071	Pnkd	100	98.701	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0027496	Pnkd	100	97.778	ENSCGRG00000005443	Pnkd	100	97.778	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0027496	Pnkd	98	55.899	ENSCSEG00000013958	pnkd	99	53.933	Cynoglossus_semilaevis
MGP_PahariEiJ_G0027496	Pnkd	89	62.069	ENSCVAG00000005723	pnkd	89	62.069	Cyprinodon_variegatus
MGP_PahariEiJ_G0027496	Pnkd	100	55.956	ENSDARG00000071032	pnkd	89	61.250	Danio_rerio
MGP_PahariEiJ_G0027496	Pnkd	100	90.278	ENSDNOG00000046154	PNKD	89	89.722	Dasypus_novemcinctus
MGP_PahariEiJ_G0027496	Pnkd	100	96.641	ENSDORG00000016109	Pnkd	100	96.641	Dipodomys_ordii
MGP_PahariEiJ_G0027496	Pnkd	100	65.039	ENSETEG00000014587	PNKD	100	65.039	Echinops_telfairi
MGP_PahariEiJ_G0027496	Pnkd	85	53.595	ENSEBUG00000013857	pnkd	98	53.668	Eptatretus_burgeri
MGP_PahariEiJ_G0027496	Pnkd	100	91.111	ENSEASG00005012391	PNKD	100	91.111	Equus_asinus_asinus
MGP_PahariEiJ_G0027496	Pnkd	100	94.805	ENSECAG00000013322	PNKD	100	94.805	Equus_caballus
MGP_PahariEiJ_G0027496	Pnkd	98	55.402	ENSELUG00000015007	pnkd	91	56.286	Esox_lucius
MGP_PahariEiJ_G0027496	Pnkd	100	91.111	ENSFCAG00000002373	PNKD	100	91.111	Felis_catus
MGP_PahariEiJ_G0027496	Pnkd	86	63.107	ENSFALG00000004028	PNKD	95	62.579	Ficedula_albicollis
MGP_PahariEiJ_G0027496	Pnkd	100	96.364	ENSFDAG00000012326	PNKD	100	96.364	Fukomys_damarensis
MGP_PahariEiJ_G0027496	Pnkd	89	62.069	ENSFHEG00000010999	pnkd	86	62.069	Fundulus_heteroclitus
MGP_PahariEiJ_G0027496	Pnkd	100	56.510	ENSGMOG00000009565	pnkd	96	57.267	Gadus_morhua
MGP_PahariEiJ_G0027496	Pnkd	86	62.701	ENSGALG00000022166	PNKD	98	62.745	Gallus_gallus
MGP_PahariEiJ_G0027496	Pnkd	89	62.382	ENSGAFG00000013942	pnkd	80	62.382	Gambusia_affinis
MGP_PahariEiJ_G0027496	Pnkd	99	58.146	ENSGACG00000007119	pnkd	91	61.468	Gasterosteus_aculeatus
MGP_PahariEiJ_G0027496	Pnkd	88	61.950	ENSGAGG00000017234	PNKD	100	61.950	Gopherus_agassizii
MGP_PahariEiJ_G0027496	Pnkd	100	96.104	ENSGGOG00000006892	PNKD	100	96.104	Gorilla_gorilla
MGP_PahariEiJ_G0027496	Pnkd	95	60.058	ENSHBUG00000001234	pnkd	89	62.382	Haplochromis_burtoni
MGP_PahariEiJ_G0027496	Pnkd	100	95.844	ENSHGLG00000013971	PNKD	100	95.844	Heterocephalus_glaber_female
MGP_PahariEiJ_G0027496	Pnkd	100	95.844	ENSHGLG00100005225	PNKD	100	95.844	Heterocephalus_glaber_male
MGP_PahariEiJ_G0027496	Pnkd	99	58.263	ENSHCOG00000018894	pnkd	88	63.057	Hippocampus_comes
MGP_PahariEiJ_G0027496	Pnkd	100	59.116	ENSIPUG00000013907	pnkd	99	63.844	Ictalurus_punctatus
MGP_PahariEiJ_G0027496	Pnkd	100	97.922	ENSSTOG00000024593	PNKD	100	97.922	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0027496	Pnkd	100	94.805	ENSJJAG00000023559	Pnkd	100	95.844	Jaculus_jaculus
MGP_PahariEiJ_G0027496	Pnkd	89	61.442	ENSKMAG00000014879	pnkd	89	61.442	Kryptolebias_marmoratus
MGP_PahariEiJ_G0027496	Pnkd	89	61.755	ENSLBEG00000000985	pnkd	89	61.755	Labrus_bergylta
MGP_PahariEiJ_G0027496	Pnkd	100	57.025	ENSLOCG00000000821	pnkd	89	61.755	Lepisosteus_oculatus
MGP_PahariEiJ_G0027496	Pnkd	100	92.689	ENSLAFG00000007427	PNKD	100	92.689	Loxodonta_africana
MGP_PahariEiJ_G0027496	Pnkd	100	96.364	ENSMFAG00000038281	PNKD	100	96.364	Macaca_fascicularis
MGP_PahariEiJ_G0027496	Pnkd	50	98.343	ENSMMUG00000022819	-	100	98.343	Macaca_mulatta
MGP_PahariEiJ_G0027496	Pnkd	100	93.075	ENSMNEG00000041541	PNKD	100	96.497	Macaca_nemestrina
MGP_PahariEiJ_G0027496	Pnkd	100	96.364	ENSMLEG00000042812	PNKD	100	96.364	Mandrillus_leucophaeus
MGP_PahariEiJ_G0027496	Pnkd	89	61.755	ENSMAMG00000017212	pnkd	89	61.755	Mastacembelus_armatus
MGP_PahariEiJ_G0027496	Pnkd	82	62.712	ENSMZEG00005012514	pnkd	100	62.712	Maylandia_zebra
MGP_PahariEiJ_G0027496	Pnkd	50	51.364	ENSMGAG00000011524	PNKD	100	56.250	Meleagris_gallopavo
MGP_PahariEiJ_G0027496	Pnkd	100	98.056	ENSMAUG00000013099	Pnkd	100	98.056	Mesocricetus_auratus
MGP_PahariEiJ_G0027496	Pnkd	100	96.883	ENSMICG00000042547	PNKD	100	96.883	Microcebus_murinus
MGP_PahariEiJ_G0027496	Pnkd	100	99.059	ENSMOCG00000007956	Pnkd	100	99.059	Microtus_ochrogaster
MGP_PahariEiJ_G0027496	Pnkd	86	62.460	ENSMMOG00000005679	pnkd	99	58.501	Mola_mola
MGP_PahariEiJ_G0027496	Pnkd	86	78.778	ENSMODG00000015497	PNKD	97	72.254	Monodelphis_domestica
MGP_PahariEiJ_G0027496	Pnkd	95	60.580	ENSMALG00000005967	pnkd	78	63.898	Monopterus_albus
MGP_PahariEiJ_G0027496	Pnkd	100	100.000	MGP_CAROLIEiJ_G0014258	Pnkd	100	100.000	Mus_caroli
MGP_PahariEiJ_G0027496	Pnkd	100	100.000	ENSMUSG00000026179	Pnkd	100	100.000	Mus_musculus
MGP_PahariEiJ_G0027496	Pnkd	100	99.740	MGP_SPRETEiJ_G0015064	Pnkd	100	99.740	Mus_spretus
MGP_PahariEiJ_G0027496	Pnkd	100	91.944	ENSMPUG00000016531	PNKD	100	91.944	Mustela_putorius_furo
MGP_PahariEiJ_G0027496	Pnkd	85	94.771	ENSMLUG00000004125	PNKD	100	94.771	Myotis_lucifugus
MGP_PahariEiJ_G0027496	Pnkd	100	98.182	ENSNGAG00000014980	Pnkd	100	98.182	Nannospalax_galili
MGP_PahariEiJ_G0027496	Pnkd	86	62.662	ENSNBRG00000020031	pnkd	96	62.460	Neolamprologus_brichardi
MGP_PahariEiJ_G0027496	Pnkd	100	72.727	ENSMEUG00000011266	PNKD	100	72.727	Notamacropus_eugenii
MGP_PahariEiJ_G0027496	Pnkd	100	95.556	ENSODEG00000009734	PNKD	100	95.556	Octodon_degus
MGP_PahariEiJ_G0027496	Pnkd	95	59.475	ENSONIG00000004389	pnkd	89	61.755	Oreochromis_niloticus
MGP_PahariEiJ_G0027496	Pnkd	100	92.925	ENSOCUG00000023754	PNKD	100	92.925	Oryctolagus_cuniculus
MGP_PahariEiJ_G0027496	Pnkd	89	59.878	ENSORLG00000026276	pnkd	91	59.878	Oryzias_latipes
MGP_PahariEiJ_G0027496	Pnkd	89	59.878	ENSORLG00020008373	pnkd	97	61.921	Oryzias_latipes_hni
MGP_PahariEiJ_G0027496	Pnkd	89	60.182	ENSORLG00015005276	pnkd	91	60.182	Oryzias_latipes_hsok
MGP_PahariEiJ_G0027496	Pnkd	89	60.748	ENSOMEG00000016106	pnkd	89	60.748	Oryzias_melastigma
MGP_PahariEiJ_G0027496	Pnkd	85	96.732	ENSOGAG00000001792	PNKD	100	96.732	Otolemur_garnettii
MGP_PahariEiJ_G0027496	Pnkd	100	95.584	ENSOARG00000019505	PNKD	100	95.584	Ovis_aries
MGP_PahariEiJ_G0027496	Pnkd	100	96.104	ENSPPAG00000034969	PNKD	100	96.104	Pan_paniscus
MGP_PahariEiJ_G0027496	Pnkd	100	91.111	ENSPPRG00000023720	PNKD	100	91.111	Panthera_pardus
MGP_PahariEiJ_G0027496	Pnkd	100	88.831	ENSPTIG00000021040	PNKD	100	88.831	Panthera_tigris_altaica
MGP_PahariEiJ_G0027496	Pnkd	100	95.844	ENSPTRG00000012914	PNKD	100	95.844	Pan_troglodytes
MGP_PahariEiJ_G0027496	Pnkd	100	96.364	ENSPANG00000005752	PNKD	100	96.364	Papio_anubis
MGP_PahariEiJ_G0027496	Pnkd	97	58.046	ENSPKIG00000011208	pnkd	100	60.063	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0027496	Pnkd	85	59.804	ENSPMGG00000005169	pnkd	100	59.804	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0027496	Pnkd	100	98.701	ENSPEMG00000010689	Pnkd	100	98.701	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0027496	Pnkd	85	53.595	ENSPMAG00000006947	pnkd	99	53.595	Petromyzon_marinus
MGP_PahariEiJ_G0027496	Pnkd	91	78.834	ENSPCIG00000021457	PNKD	100	73.554	Phascolarctos_cinereus
MGP_PahariEiJ_G0027496	Pnkd	88	62.857	ENSPFOG00000010628	pnkd	95	58.140	Poecilia_formosa
MGP_PahariEiJ_G0027496	Pnkd	62	66.071	ENSPLAG00000020583	pnkd	95	59.289	Poecilia_latipinna
MGP_PahariEiJ_G0027496	Pnkd	72	65.251	ENSPMEG00000006542	pnkd	72	60.284	Poecilia_mexicana
MGP_PahariEiJ_G0027496	Pnkd	88	62.222	ENSPREG00000014434	pnkd	95	57.726	Poecilia_reticulata
MGP_PahariEiJ_G0027496	Pnkd	100	96.104	ENSPPYG00000013167	PNKD	100	96.104	Pongo_abelii
MGP_PahariEiJ_G0027496	Pnkd	100	76.364	ENSPCAG00000003946	PNKD	100	76.364	Procavia_capensis
MGP_PahariEiJ_G0027496	Pnkd	100	97.143	ENSPCOG00000019839	PNKD	100	97.143	Propithecus_coquereli
MGP_PahariEiJ_G0027496	Pnkd	88	62.579	ENSPNYG00000016327	pnkd	100	62.579	Pundamilia_nyererei
MGP_PahariEiJ_G0027496	Pnkd	100	59.003	ENSPNAG00000008655	pnkd	100	59.003	Pygocentrus_nattereri
MGP_PahariEiJ_G0027496	Pnkd	100	99.221	ENSRNOG00000014806	Pnkd	100	99.221	Rattus_norvegicus
MGP_PahariEiJ_G0027496	Pnkd	100	96.364	ENSRBIG00000031614	PNKD	100	96.364	Rhinopithecus_bieti
MGP_PahariEiJ_G0027496	Pnkd	100	96.364	ENSRROG00000045542	PNKD	100	96.364	Rhinopithecus_roxellana
MGP_PahariEiJ_G0027496	Pnkd	100	96.104	ENSSBOG00000036000	PNKD	100	96.104	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0027496	Pnkd	88	79.439	ENSSHAG00000016339	PNKD	100	79.439	Sarcophilus_harrisii
MGP_PahariEiJ_G0027496	Pnkd	90	62.462	ENSSFOG00015013028	pnkd	90	61.310	Scleropages_formosus
MGP_PahariEiJ_G0027496	Pnkd	97	58.000	ENSSMAG00000006812	pnkd	97	56.857	Scophthalmus_maximus
MGP_PahariEiJ_G0027496	Pnkd	100	56.389	ENSSDUG00000012538	pnkd	89	61.129	Seriola_dumerili
MGP_PahariEiJ_G0027496	Pnkd	89	61.129	ENSSLDG00000021431	pnkd	86	61.129	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0027496	Pnkd	86	49.196	ENSSPUG00000018454	PNKD	98	52.131	Sphenodon_punctatus
MGP_PahariEiJ_G0027496	Pnkd	89	61.755	ENSSPAG00000007083	pnkd	89	61.755	Stegastes_partitus
MGP_PahariEiJ_G0027496	Pnkd	100	96.185	ENSSSCG00000029002	PNKD	100	95.584	Sus_scrofa
MGP_PahariEiJ_G0027496	Pnkd	89	60.188	ENSTRUG00000009399	pnkd	89	60.188	Takifugu_rubripes
MGP_PahariEiJ_G0027496	Pnkd	100	56.944	ENSTNIG00000010992	pnkd	90	60.681	Tetraodon_nigroviridis
MGP_PahariEiJ_G0027496	Pnkd	100	93.766	ENSTTRG00000012895	PNKD	100	93.766	Tursiops_truncatus
MGP_PahariEiJ_G0027496	Pnkd	100	90.556	ENSUAMG00000000289	PNKD	100	90.556	Ursus_americanus
MGP_PahariEiJ_G0027496	Pnkd	100	79.740	ENSUMAG00000019639	PNKD	100	79.740	Ursus_maritimus
MGP_PahariEiJ_G0027496	Pnkd	100	95.844	ENSVVUG00000007348	PNKD	100	95.844	Vulpes_vulpes
MGP_PahariEiJ_G0027496	Pnkd	86	63.666	ENSXETG00000014931	pnkd	99	64.078	Xenopus_tropicalis
MGP_PahariEiJ_G0027496	Pnkd	86	62.987	ENSXCOG00000014370	pnkd	95	62.987	Xiphophorus_couchianus