EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0027720 (Gene tree)
Gene ID: 110321508
Gene Symbol: Zcchc2
Alias: 9930114B20Rik
Full Name: zinc finger CCHC-type containing 2
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 46577 bases
Position: chr5:82013883-82060459
Accession: 110321508
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0074658	zf-CCHC	PF00098.23	6.4e-06	1	1
MGP_PahariEiJ_P0074657	zf-CCHC	PF00098.23	9.4e-06	1	1
MGP_PahariEiJ_P0074656	zf-CCHC	PF00098.23	9.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0074657	-	6494	-	MGP_PahariEiJ_P0074657	1164 (aa)	-	-
MGP_PahariEiJ_T0074656	-	5818	XM_021197781	MGP_PahariEiJ_P0074656	1175 (aa)	XP_021053440	UPI000A305B17
MGP_PahariEiJ_T0074660	-	601	-	MGP_PahariEiJ_P0074660	79 (aa)	-	-
MGP_PahariEiJ_T0074659	-	770	-	MGP_PahariEiJ_P0074659	256 (aa)	-	-
MGP_PahariEiJ_T0074658	-	3745	-	MGP_PahariEiJ_P0074658	762 (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0027720's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0027720's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0027720	Zcchc2	55	40.136	MGP_PahariEiJ_G0023248	-	61	39.429

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0027720	Zcchc2	99	80.247	ENSG00000141664	ZCCHC2	100	97.170	Homo_sapiens
MGP_PahariEiJ_G0027720	Zcchc2	99	77.778	ENSAMEG00000006283	ZCCHC2	92	84.644	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0027720	Zcchc2	99	31.969	ENSAOCG00000018816	-	96	35.909	Amphiprion_ocellaris
MGP_PahariEiJ_G0027720	Zcchc2	99	32.143	ENSAPEG00000012103	-	95	37.374	Amphiprion_percula
MGP_PahariEiJ_G0027720	Zcchc2	92	34.185	ENSATEG00000020193	zcchc2	94	35.173	Anabas_testudineus
MGP_PahariEiJ_G0027720	Zcchc2	99	65.281	ENSAPLG00000003573	ZCCHC2	100	70.670	Anas_platyrhynchos
MGP_PahariEiJ_G0027720	Zcchc2	99	57.721	ENSACAG00000011813	ZCCHC2	96	61.416	Anolis_carolinensis
MGP_PahariEiJ_G0027720	Zcchc2	100	82.363	ENSANAG00000035764	ZCCHC2	93	86.789	Aotus_nancymaae
MGP_PahariEiJ_G0027720	Zcchc2	99	30.409	ENSACLG00000004507	-	94	35.168	Astatotilapia_calliptera
MGP_PahariEiJ_G0027720	Zcchc2	71	34.391	ENSAMXG00000040972	-	89	34.951	Astyanax_mexicanus
MGP_PahariEiJ_G0027720	Zcchc2	64	45.946	ENSAMXG00000041767	zcchc2	87	38.559	Astyanax_mexicanus
MGP_PahariEiJ_G0027720	Zcchc2	82	75.655	ENSBTAG00000050848	ZCCHC2	100	69.602	Bos_taurus
MGP_PahariEiJ_G0027720	Zcchc2	55	39.726	ENSBTAG00000014267	ZCCHC14	60	40.571	Bos_taurus
MGP_PahariEiJ_G0027720	Zcchc2	99	80.741	ENSCJAG00000003312	ZCCHC2	100	84.992	Callithrix_jacchus
MGP_PahariEiJ_G0027720	Zcchc2	55	37.415	ENSCJAG00000004460	ZCCHC14	61	37.143	Callithrix_jacchus
MGP_PahariEiJ_G0027720	Zcchc2	99	75.432	ENSCAFG00000000073	ZCCHC2	99	82.135	Canis_familiaris
MGP_PahariEiJ_G0027720	Zcchc2	99	75.631	ENSCAFG00020017046	ZCCHC2	100	80.992	Canis_lupus_dingo
MGP_PahariEiJ_G0027720	Zcchc2	82	73.783	ENSCHIG00000016298	ZCCHC2	100	68.713	Capra_hircus
MGP_PahariEiJ_G0027720	Zcchc2	99	78.519	ENSTSYG00000007331	ZCCHC2	100	85.499	Carlito_syrichta
MGP_PahariEiJ_G0027720	Zcchc2	99	73.120	ENSCAPG00000014510	ZCCHC2	100	79.538	Cavia_aperea
MGP_PahariEiJ_G0027720	Zcchc2	99	80.841	ENSCPOG00000014085	ZCCHC2	92	87.227	Cavia_porcellus
MGP_PahariEiJ_G0027720	Zcchc2	99	80.494	ENSCCAG00000021979	ZCCHC2	100	84.739	Cebus_capucinus
MGP_PahariEiJ_G0027720	Zcchc2	100	82.954	ENSCATG00000038478	ZCCHC2	99	86.414	Cercocebus_atys
MGP_PahariEiJ_G0027720	Zcchc2	99	81.088	ENSCLAG00000010985	ZCCHC2	100	87.342	Chinchilla_lanigera
MGP_PahariEiJ_G0027720	Zcchc2	99	79.481	ENSCSAG00000018187	ZCCHC2	99	86.275	Chlorocebus_sabaeus
MGP_PahariEiJ_G0027720	Zcchc2	99	76.456	ENSCHOG00000002359	ZCCHC2	100	82.724	Choloepus_hoffmanni
MGP_PahariEiJ_G0027720	Zcchc2	99	68.050	ENSCPBG00000026588	ZCCHC2	93	69.837	Chrysemys_picta_bellii
MGP_PahariEiJ_G0027720	Zcchc2	99	79.877	ENSCANG00000029790	ZCCHC2	100	86.775	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0027720	Zcchc2	100	90.277	ENSCGRG00001022059	Zcchc2	100	89.791	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0027720	Zcchc2	99	81.358	ENSCGRG00000014383	Zcchc2	97	86.674	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0027720	Zcchc2	86	38.158	ENSCSEG00000007152	-	85	37.441	Cynoglossus_semilaevis
MGP_PahariEiJ_G0027720	Zcchc2	59	37.465	ENSCVAG00000005640	-	95	35.862	Cyprinodon_variegatus
MGP_PahariEiJ_G0027720	Zcchc2	82	40.878	ENSDARG00000067950	zcchc2	100	42.230	Danio_rerio
MGP_PahariEiJ_G0027720	Zcchc2	92	84.510	ENSDNOG00000015952	ZCCHC2	99	84.601	Dasypus_novemcinctus
MGP_PahariEiJ_G0027720	Zcchc2	99	79.705	ENSDORG00000010199	Zcchc2	100	83.784	Dipodomys_ordii
MGP_PahariEiJ_G0027720	Zcchc2	99	69.877	ENSETEG00000002750	ZCCHC2	100	75.499	Echinops_telfairi
MGP_PahariEiJ_G0027720	Zcchc2	55	38.095	ENSEASG00005013865	ZCCHC14	61	39.205	Equus_asinus_asinus
MGP_PahariEiJ_G0027720	Zcchc2	92	85.859	ENSEASG00005002645	ZCCHC2	100	84.237	Equus_asinus_asinus
MGP_PahariEiJ_G0027720	Zcchc2	55	38.095	ENSECAG00000013066	ZCCHC14	63	39.205	Equus_caballus
MGP_PahariEiJ_G0027720	Zcchc2	99	79.012	ENSECAG00000014990	ZCCHC2	100	84.317	Equus_caballus
MGP_PahariEiJ_G0027720	Zcchc2	99	60.491	ENSEEUG00000008744	ZCCHC2	100	68.229	Erinaceus_europaeus
MGP_PahariEiJ_G0027720	Zcchc2	50	47.805	ENSELUG00000024099	-	73	47.805	Esox_lucius
MGP_PahariEiJ_G0027720	Zcchc2	92	83.744	ENSFCAG00000030054	ZCCHC2	100	82.941	Felis_catus
MGP_PahariEiJ_G0027720	Zcchc2	99	65.116	ENSFALG00000012977	ZCCHC2	100	69.096	Ficedula_albicollis
MGP_PahariEiJ_G0027720	Zcchc2	99	80.222	ENSFDAG00000011521	ZCCHC2	99	86.982	Fukomys_damarensis
MGP_PahariEiJ_G0027720	Zcchc2	57	39.645	ENSGALG00000034166	ZCCHC14	60	40.341	Gallus_gallus
MGP_PahariEiJ_G0027720	Zcchc2	99	65.116	ENSGALG00000012889	ZCCHC2	91	70.894	Gallus_gallus
MGP_PahariEiJ_G0027720	Zcchc2	55	42.105	ENSGAGG00000001754	ZCCHC14	61	40.909	Gopherus_agassizii
MGP_PahariEiJ_G0027720	Zcchc2	99	68.262	ENSGAGG00000023874	ZCCHC2	100	70.038	Gopherus_agassizii
MGP_PahariEiJ_G0027720	Zcchc2	99	80.247	ENSGGOG00000002966	ZCCHC2	99	86.612	Gorilla_gorilla
MGP_PahariEiJ_G0027720	Zcchc2	92	34.952	ENSHBUG00000012799	-	94	34.831	Haplochromis_burtoni
MGP_PahariEiJ_G0027720	Zcchc2	99	77.078	ENSHGLG00000000903	-	97	77.061	Heterocephalus_glaber_female
MGP_PahariEiJ_G0027720	Zcchc2	99	80.470	ENSHGLG00000002443	-	100	85.110	Heterocephalus_glaber_female
MGP_PahariEiJ_G0027720	Zcchc2	99	75.693	ENSHGLG00100004917	-	100	80.423	Heterocephalus_glaber_male
MGP_PahariEiJ_G0027720	Zcchc2	69	39.810	ENSIPUG00000009963	zcchc2	88	35.587	Ictalurus_punctatus
MGP_PahariEiJ_G0027720	Zcchc2	99	81.088	ENSSTOG00000015357	ZCCHC2	100	87.731	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0027720	Zcchc2	99	74.660	ENSJJAG00000014570	Zcchc2	100	79.945	Jaculus_jaculus
MGP_PahariEiJ_G0027720	Zcchc2	71	45.633	ENSLACG00000002296	-	100	45.098	Latimeria_chalumnae
MGP_PahariEiJ_G0027720	Zcchc2	99	37.707	ENSLOCG00000010044	zcchc2	94	43.427	Lepisosteus_oculatus
MGP_PahariEiJ_G0027720	Zcchc2	99	75.093	ENSLAFG00000021566	ZCCHC2	95	81.726	Loxodonta_africana
MGP_PahariEiJ_G0027720	Zcchc2	99	79.753	ENSMFAG00000033238	ZCCHC2	100	85.757	Macaca_fascicularis
MGP_PahariEiJ_G0027720	Zcchc2	99	79.753	ENSMMUG00000004434	ZCCHC2	89	85.347	Macaca_mulatta
MGP_PahariEiJ_G0027720	Zcchc2	99	79.753	ENSMNEG00000033594	ZCCHC2	99	86.734	Macaca_nemestrina
MGP_PahariEiJ_G0027720	Zcchc2	99	79.753	ENSMLEG00000031802	ZCCHC2	100	86.659	Mandrillus_leucophaeus
MGP_PahariEiJ_G0027720	Zcchc2	91	34.354	ENSMAMG00000021679	-	94	34.805	Mastacembelus_armatus
MGP_PahariEiJ_G0027720	Zcchc2	92	35.259	ENSMZEG00005015504	-	94	35.198	Maylandia_zebra
MGP_PahariEiJ_G0027720	Zcchc2	99	65.441	ENSMGAG00000004834	ZCCHC2	100	70.896	Meleagris_gallopavo
MGP_PahariEiJ_G0027720	Zcchc2	92	91.068	ENSMAUG00000016369	Zcchc2	99	91.068	Mesocricetus_auratus
MGP_PahariEiJ_G0027720	Zcchc2	99	81.425	ENSMICG00000001550	ZCCHC2	100	85.955	Microcebus_murinus
MGP_PahariEiJ_G0027720	Zcchc2	55	40.136	ENSMICG00000034441	ZCCHC14	61	39.429	Microcebus_murinus
MGP_PahariEiJ_G0027720	Zcchc2	92	88.132	ENSMOCG00000021627	Zcchc2	94	88.132	Microtus_ochrogaster
MGP_PahariEiJ_G0027720	Zcchc2	100	71.944	ENSMODG00000005101	ZCCHC2	91	76.412	Monodelphis_domestica
MGP_PahariEiJ_G0027720	Zcchc2	100	95.323	MGP_CAROLIEiJ_G0014486	Zcchc2	100	95.407	Mus_caroli
MGP_PahariEiJ_G0027720	Zcchc2	55	40.136	MGP_CAROLIEiJ_G0031650	Zcchc14	61	39.429	Mus_caroli
MGP_PahariEiJ_G0027720	Zcchc2	100	94.388	ENSMUSG00000038866	Zcchc2	100	94.732	Mus_musculus
MGP_PahariEiJ_G0027720	Zcchc2	55	40.136	MGP_SPRETEiJ_G0032768	Zcchc14	61	39.429	Mus_spretus
MGP_PahariEiJ_G0027720	Zcchc2	100	94.473	MGP_SPRETEiJ_G0015290	Zcchc2	100	94.728	Mus_spretus
MGP_PahariEiJ_G0027720	Zcchc2	100	71.166	ENSMPUG00000016510	ZCCHC2	100	72.335	Mustela_putorius_furo
MGP_PahariEiJ_G0027720	Zcchc2	99	75.309	ENSMLUG00000009495	ZCCHC2	100	81.839	Myotis_lucifugus
MGP_PahariEiJ_G0027720	Zcchc2	99	81.459	ENSNGAG00000022381	Zcchc2	92	87.570	Nannospalax_galili
MGP_PahariEiJ_G0027720	Zcchc2	99	80.494	ENSNLEG00000008618	-	100	87.471	Nomascus_leucogenys
MGP_PahariEiJ_G0027720	Zcchc2	99	71.095	ENSOPRG00000008527	ZCCHC2	100	77.320	Ochotona_princeps
MGP_PahariEiJ_G0027720	Zcchc2	99	80.099	ENSODEG00000005310	ZCCHC2	100	82.609	Octodon_degus
MGP_PahariEiJ_G0027720	Zcchc2	91	35.632	ENSONIG00000011258	-	94	35.929	Oreochromis_niloticus
MGP_PahariEiJ_G0027720	Zcchc2	65	49.237	ENSOANG00000012779	-	100	52.174	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0027720	Zcchc2	99	75.802	ENSOCUG00000012130	ZCCHC2	100	82.599	Oryctolagus_cuniculus
MGP_PahariEiJ_G0027720	Zcchc2	63	49.261	ENSORLG00000004152	zcchc2	87	48.500	Oryzias_latipes
MGP_PahariEiJ_G0027720	Zcchc2	93	34.612	ENSORLG00020009577	-	94	34.542	Oryzias_latipes_hni
MGP_PahariEiJ_G0027720	Zcchc2	93	34.367	ENSORLG00015006011	-	94	34.731	Oryzias_latipes_hsok
MGP_PahariEiJ_G0027720	Zcchc2	93	34.842	ENSOMEG00000001146	-	95	34.711	Oryzias_melastigma
MGP_PahariEiJ_G0027720	Zcchc2	99	80.247	ENSOGAG00000024641	ZCCHC2	100	87.123	Otolemur_garnettii
MGP_PahariEiJ_G0027720	Zcchc2	100	82.538	ENSPPAG00000029037	ZCCHC2	99	86.917	Pan_paniscus
MGP_PahariEiJ_G0027720	Zcchc2	99	77.407	ENSPPRG00000000176	ZCCHC2	99	84.862	Panthera_pardus
MGP_PahariEiJ_G0027720	Zcchc2	99	74.660	ENSPTIG00000008924	ZCCHC2	99	81.628	Panthera_tigris_altaica
MGP_PahariEiJ_G0027720	Zcchc2	100	82.789	ENSPTRG00000010076	ZCCHC2	100	85.666	Pan_troglodytes
MGP_PahariEiJ_G0027720	Zcchc2	100	82.161	ENSPANG00000013121	ZCCHC2	100	85.076	Papio_anubis
MGP_PahariEiJ_G0027720	Zcchc2	99	36.627	ENSPKIG00000001677	zcchc2	95	42.314	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0027720	Zcchc2	99	31.693	ENSPKIG00000001849	-	94	39.286	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0027720	Zcchc2	87	67.857	ENSPSIG00000007840	ZCCHC2	100	68.841	Pelodiscus_sinensis
MGP_PahariEiJ_G0027720	Zcchc2	91	90.698	ENSPEMG00000015159	Zcchc2	100	90.698	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0027720	Zcchc2	100	73.163	ENSPCIG00000011461	ZCCHC2	91	76.958	Phascolarctos_cinereus
MGP_PahariEiJ_G0027720	Zcchc2	57	39.645	ENSPCIG00000009877	ZCCHC14	61	39.444	Phascolarctos_cinereus
MGP_PahariEiJ_G0027720	Zcchc2	52	47.170	ENSPFOG00000011854	-	97	30.125	Poecilia_formosa
MGP_PahariEiJ_G0027720	Zcchc2	57	37.037	ENSPLAG00000003953	-	95	33.961	Poecilia_latipinna
MGP_PahariEiJ_G0027720	Zcchc2	57	44.954	ENSPMEG00000002279	-	95	33.248	Poecilia_mexicana
MGP_PahariEiJ_G0027720	Zcchc2	57	36.889	ENSPREG00000011715	zcchc2	95	33.532	Poecilia_reticulata
MGP_PahariEiJ_G0027720	Zcchc2	99	80.593	ENSPPYG00000009208	-	100	85.619	Pongo_abelii
MGP_PahariEiJ_G0027720	Zcchc2	98	77.150	ENSPCAG00000010194	ZCCHC2	100	79.513	Procavia_capensis
MGP_PahariEiJ_G0027720	Zcchc2	92	86.343	ENSPCOG00000022710	ZCCHC2	98	85.957	Propithecus_coquereli
MGP_PahariEiJ_G0027720	Zcchc2	99	71.817	ENSPVAG00000013017	ZCCHC2	100	78.184	Pteropus_vampyrus
MGP_PahariEiJ_G0027720	Zcchc2	72	32.369	ENSPNYG00000021201	-	98	32.583	Pundamilia_nyererei
MGP_PahariEiJ_G0027720	Zcchc2	91	37.445	ENSPNAG00000027536	-	94	37.719	Pygocentrus_nattereri
MGP_PahariEiJ_G0027720	Zcchc2	83	36.484	ENSPNAG00000012445	zcchc2	94	36.484	Pygocentrus_nattereri
MGP_PahariEiJ_G0027720	Zcchc2	55	38.095	ENSRNOG00000018226	Zcchc14	62	37.714	Rattus_norvegicus
MGP_PahariEiJ_G0027720	Zcchc2	100	92.092	ENSRNOG00000002882	Zcchc2	100	91.341	Rattus_norvegicus
MGP_PahariEiJ_G0027720	Zcchc2	99	79.877	ENSRBIG00000035806	ZCCHC2	98	86.734	Rhinopithecus_bieti
MGP_PahariEiJ_G0027720	Zcchc2	99	82.293	ENSRROG00000034247	ZCCHC2	99	86.734	Rhinopithecus_roxellana
MGP_PahariEiJ_G0027720	Zcchc2	99	80.370	ENSSBOG00000022911	ZCCHC2	100	87.007	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0027720	Zcchc2	99	71.971	ENSSHAG00000016133	ZCCHC2	100	76.353	Sarcophilus_harrisii
MGP_PahariEiJ_G0027720	Zcchc2	83	34.609	ENSSFOG00015012993	-	98	36.635	Scleropages_formosus
MGP_PahariEiJ_G0027720	Zcchc2	99	36.485	ENSSFOG00015010533	-	99	39.213	Scleropages_formosus
MGP_PahariEiJ_G0027720	Zcchc2	62	37.813	ENSSMAG00000004119	-	94	36.485	Scophthalmus_maximus
MGP_PahariEiJ_G0027720	Zcchc2	99	30.228	ENSSDUG00000002388	-	89	35.597	Seriola_dumerili
MGP_PahariEiJ_G0027720	Zcchc2	99	31.015	ENSSLDG00000006969	zcchc2	94	37.511	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0027720	Zcchc2	99	62.267	ENSSPUG00000006991	ZCCHC2	95	65.967	Sphenodon_punctatus
MGP_PahariEiJ_G0027720	Zcchc2	92	35.054	ENSSPAG00000011032	-	95	36.447	Stegastes_partitus
MGP_PahariEiJ_G0027720	Zcchc2	55	38.776	ENSSSCG00000002656	ZCCHC14	63	39.773	Sus_scrofa
MGP_PahariEiJ_G0027720	Zcchc2	99	80.435	ENSSSCG00000004897	ZCCHC2	100	82.799	Sus_scrofa
MGP_PahariEiJ_G0027720	Zcchc2	99	76.885	ENSTTRG00000013533	ZCCHC2	100	81.468	Tursiops_truncatus
MGP_PahariEiJ_G0027720	Zcchc2	99	78.025	ENSUAMG00000019763	ZCCHC2	95	85.128	Ursus_americanus
MGP_PahariEiJ_G0027720	Zcchc2	99	74.166	ENSUMAG00000003109	ZCCHC2	93	81.565	Ursus_maritimus
MGP_PahariEiJ_G0027720	Zcchc2	99	75.062	ENSVPAG00000009934	ZCCHC2	100	81.034	Vicugna_pacos
MGP_PahariEiJ_G0027720	Zcchc2	93	80.909	ENSVVUG00000017624	ZCCHC2	99	81.204	Vulpes_vulpes
MGP_PahariEiJ_G0027720	Zcchc2	55	40.136	ENSVVUG00000000929	ZCCHC14	61	40.782	Vulpes_vulpes
MGP_PahariEiJ_G0027720	Zcchc2	99	48.554	ENSXETG00000032980	zcchc2	96	51.473	Xenopus_tropicalis