EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
MGP_PahariEiJ_G0027929 (Gene tree)
Gene ID
110321541
Gene Symbol
Trmt1l
Alias
1190005F20Rik|Trm1-like
Full Name
tRNA methyltransferase 1 like
Gene Type
protein_coding
Species
Mus_pahari
Status
putative
Strand
Plus strand
Length
27546 bases
Position
chr5:124498540-124526085
Accession
110321541
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_PahariEiJ_P0075612TRMPF02005.162.7e-6612
MGP_PahariEiJ_P0075612TRMPF02005.162.7e-6622
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_PahariEiJ_T0075611-1544--- (aa)--
MGP_PahariEiJ_T0075612-2753XM_021197836MGP_PahariEiJ_P0075612730 (aa)XP_021053495UPI000A30B35E
MGP_PahariEiJ_T0075613-3318--- (aa)--
MGP_PahariEiJ_T0075614-2222--- (aa)--
MGP_PahariEiJ_T0075615-1989--- (aa)--
MGP_PahariEiJ_T0075616-1512--- (aa)--
MGP_PahariEiJ_T0075617-2440-MGP_PahariEiJ_P0075617158 (aa)--
Gene Model
Click here to download MGP_PahariEiJ_G0027929's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0027929's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_PahariEiJ_G0027929Trmt1l10087.483ENSG00000121486TRMT1L9996.190Homo_sapiens
MGP_PahariEiJ_G0027929Trmt1l8560.127ENSAPOG00000011807trmt1l9856.822Acanthochromis_polyacanthus
MGP_PahariEiJ_G0027929Trmt1l10086.395ENSAMEG00000013538TRMT1L10086.974Ailuropoda_melanoleuca
MGP_PahariEiJ_G0027929Trmt1l6861.647ENSACIG00000012049trmt1l9661.647Amphilophus_citrinellus
MGP_PahariEiJ_G0027929Trmt1l8561.327ENSAOCG00000018112trmt1l9760.932Amphiprion_ocellaris
MGP_PahariEiJ_G0027929Trmt1l8560.383ENSAPEG00000021433trmt1l9759.905Amphiprion_percula
MGP_PahariEiJ_G0027929Trmt1l8860.829ENSATEG00000004573trmt1l9863.306Anabas_testudineus
MGP_PahariEiJ_G0027929Trmt1l9171.579ENSAPLG00000008394TRMT1L9868.458Anas_platyrhynchos
MGP_PahariEiJ_G0027929Trmt1l8772.713ENSACAG00000002342TRMT1L8772.713Anolis_carolinensis
MGP_PahariEiJ_G0027929Trmt1l10087.483ENSANAG00000038162TRMT1L10087.483Aotus_nancymaae
MGP_PahariEiJ_G0027929Trmt1l8860.369ENSACLG00000021625trmt1l9360.369Astatotilapia_calliptera
MGP_PahariEiJ_G0027929Trmt1l8761.385ENSAMXG00000009602trmt1l9161.385Astyanax_mexicanus
MGP_PahariEiJ_G0027929Trmt1l10085.521ENSBTAG00000011285TRMT1L10085.830Bos_taurus
MGP_PahariEiJ_G0027929Trmt1l10086.122ENSCJAG00000005456TRMT1L10086.122Callithrix_jacchus
MGP_PahariEiJ_G0027929Trmt1l9986.277ENSCAFG00000013518TRMT1L9886.957Canis_familiaris
MGP_PahariEiJ_G0027929Trmt1l10086.296ENSCAFG00020015640TRMT1L10086.974Canis_lupus_dingo
MGP_PahariEiJ_G0027929Trmt1l10086.062ENSCHIG00000016522TRMT1L10086.370Capra_hircus
MGP_PahariEiJ_G0027929Trmt1l10085.578ENSTSYG00000010465TRMT1L10084.980Carlito_syrichta
MGP_PahariEiJ_G0027929Trmt1l7286.594ENSCAPG00000012562TRMT1L8887.681Cavia_aperea
MGP_PahariEiJ_G0027929Trmt1l10084.563ENSCPOG00000001567TRMT1L10085.246Cavia_porcellus
MGP_PahariEiJ_G0027929Trmt1l10087.619ENSCCAG00000018699TRMT1L10087.619Cebus_capucinus
MGP_PahariEiJ_G0027929Trmt1l9787.904ENSCATG00000043114TRMT1L10087.246Cercocebus_atys
MGP_PahariEiJ_G0027929Trmt1l10086.885ENSCLAG00000010801-10087.295Chinchilla_lanigera
MGP_PahariEiJ_G0027929Trmt1l9768.864ENSCLAG00000010853-9869.315Chinchilla_lanigera
MGP_PahariEiJ_G0027929Trmt1l9787.904ENSCSAG00000012880TRMT1L10087.246Chlorocebus_sabaeus
MGP_PahariEiJ_G0027929Trmt1l6093.004ENSCHOG00000011164TRMT1L8974.688Choloepus_hoffmanni
MGP_PahariEiJ_G0027929Trmt1l8875.270ENSCPBG00000015694TRMT1L9275.000Chrysemys_picta_bellii
MGP_PahariEiJ_G0027929Trmt1l9787.342ENSCANG00000031107TRMT1L10086.703Colobus_angolensis_palliatus
MGP_PahariEiJ_G0027929Trmt1l10093.579ENSCGRG00001019297Trmt1l10093.579Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0027929Trmt1l10093.579ENSCGRG00000005036Trmt1l10093.579Cricetulus_griseus_crigri
MGP_PahariEiJ_G0027929Trmt1l8760.686ENSCSEG00000001248trmt1l9361.218Cynoglossus_semilaevis
MGP_PahariEiJ_G0027929Trmt1l8958.410ENSCVAG00000012274trmt1l9658.079Cyprinodon_variegatus
MGP_PahariEiJ_G0027929Trmt1l8560.635ENSDARG00000042057trmt1l9461.148Danio_rerio
MGP_PahariEiJ_G0027929Trmt1l10084.741ENSDNOG00000005239TRMT1L10085.462Dasypus_novemcinctus
MGP_PahariEiJ_G0027929Trmt1l9876.709ENSDORG00000003298Trmt1l10077.266Dipodomys_ordii
MGP_PahariEiJ_G0027929Trmt1l8276.682ENSETEG00000015895TRMT1L9176.682Echinops_telfairi
MGP_PahariEiJ_G0027929Trmt1l8848.442ENSEBUG00000010301trmt1l9748.442Eptatretus_burgeri
MGP_PahariEiJ_G0027929Trmt1l10082.615ENSEASG00005005551TRMT1L10082.345Equus_asinus_asinus
MGP_PahariEiJ_G0027929Trmt1l9986.351ENSECAG00000020999TRMT1L9586.081Equus_caballus
MGP_PahariEiJ_G0027929Trmt1l9972.466ENSEEUG00000014110TRMT1L10072.740Erinaceus_europaeus
MGP_PahariEiJ_G0027929Trmt1l8562.677ENSELUG00000020587trmt1l8862.835Esox_lucius
MGP_PahariEiJ_G0027929Trmt1l10086.122ENSFCAG00000011285TRMT1L10086.974Felis_catus
MGP_PahariEiJ_G0027929Trmt1l8969.954ENSFALG00000003177TRMT1L10069.954Ficedula_albicollis
MGP_PahariEiJ_G0027929Trmt1l10085.675ENSFDAG00000008822TRMT1L10085.675Fukomys_damarensis
MGP_PahariEiJ_G0027929Trmt1l7162.384ENSFHEG00000014328trmt1l9962.384Fundulus_heteroclitus
MGP_PahariEiJ_G0027929Trmt1l8759.812ENSGMOG00000009535trmt1l9959.591Gadus_morhua
MGP_PahariEiJ_G0027929Trmt1l9069.909ENSGALG00000033077TRMT1L8570.943Gallus_gallus
MGP_PahariEiJ_G0027929Trmt1l9157.965ENSGAFG00000012445trmt1l9358.652Gambusia_affinis
MGP_PahariEiJ_G0027929Trmt1l8560.539ENSGACG00000005050trmt1l9860.539Gasterosteus_aculeatus
MGP_PahariEiJ_G0027929Trmt1l8875.270ENSGAGG00000007441TRMT1L8475.504Gopherus_agassizii
MGP_PahariEiJ_G0027929Trmt1l10087.483ENSGGOG00000011778TRMT1L10087.483Gorilla_gorilla
MGP_PahariEiJ_G0027929Trmt1l9357.849ENSHBUG00000000622trmt1l9762.248Haplochromis_burtoni
MGP_PahariEiJ_G0027929Trmt1l10072.065ENSHGLG00000012595-9972.140Heterocephalus_glaber_female
MGP_PahariEiJ_G0027929Trmt1l10081.199ENSHGLG00000003135-10082.377Heterocephalus_glaber_female
MGP_PahariEiJ_G0027929Trmt1l10085.286ENSHGLG00100019412-10086.475Heterocephalus_glaber_male
MGP_PahariEiJ_G0027929Trmt1l10072.065ENSHGLG00100004569-9972.140Heterocephalus_glaber_male
MGP_PahariEiJ_G0027929Trmt1l8560.925ENSIPUG00000008873trmt1l9760.287Ictalurus_punctatus
MGP_PahariEiJ_G0027929Trmt1l10087.432ENSSTOG00000010332TRMT1L10087.295Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0027929Trmt1l10083.083ENSJJAG00000010929Trmt1l10082.627Jaculus_jaculus
MGP_PahariEiJ_G0027929Trmt1l8560.835ENSKMAG00000010310trmt1l9060.772Kryptolebias_marmoratus
MGP_PahariEiJ_G0027929Trmt1l9058.595ENSLBEG00000003487trmt1l9060.220Labrus_bergylta
MGP_PahariEiJ_G0027929Trmt1l8357.692ENSLBEG00000007982-9259.391Labrus_bergylta
MGP_PahariEiJ_G0027929Trmt1l8865.798ENSLACG00000008447TRMT1L9565.948Latimeria_chalumnae
MGP_PahariEiJ_G0027929Trmt1l8762.848ENSLOCG00000001781trmt1l9062.848Lepisosteus_oculatus
MGP_PahariEiJ_G0027929Trmt1l10084.836ENSLAFG00000004339TRMT1L10086.221Loxodonta_africana
MGP_PahariEiJ_G0027929Trmt1l9787.764ENSMFAG00000037592TRMT1L10087.110Macaca_fascicularis
MGP_PahariEiJ_G0027929Trmt1l9787.623ENSMMUG00000013879TRMT1L10086.974Macaca_mulatta
MGP_PahariEiJ_G0027929Trmt1l9787.904ENSMNEG00000041637TRMT1L10087.246Macaca_nemestrina
MGP_PahariEiJ_G0027929Trmt1l9787.764ENSMLEG00000004840TRMT1L10087.110Mandrillus_leucophaeus
MGP_PahariEiJ_G0027929Trmt1l8461.951ENSMAMG00000015305trmt1l9861.951Mastacembelus_armatus
MGP_PahariEiJ_G0027929Trmt1l8860.215ENSMZEG00005017822trmt1l9360.215Maylandia_zebra
MGP_PahariEiJ_G0027929Trmt1l8970.552ENSMGAG00000000930TRMT1L9970.552Meleagris_gallopavo
MGP_PahariEiJ_G0027929Trmt1l10088.027ENSMAUG00000019870Trmt1l10088.027Mesocricetus_auratus
MGP_PahariEiJ_G0027929Trmt1l10088.163ENSMICG00000009494TRMT1L10088.163Microcebus_murinus
MGP_PahariEiJ_G0027929Trmt1l10092.740ENSMOCG00000016453Trmt1l10092.740Microtus_ochrogaster
MGP_PahariEiJ_G0027929Trmt1l8459.455ENSMMOG00000016961trmt1l9758.974Mola_mola
MGP_PahariEiJ_G0027929Trmt1l8977.863ENSMODG00000007454TRMT1L8671.640Monodelphis_domestica
MGP_PahariEiJ_G0027929Trmt1l9456.571ENSMALG00000019306trmt1l9160.472Monopterus_albus
MGP_PahariEiJ_G0027929Trmt1l10097.123MGP_CAROLIEiJ_G0014693Trmt1l10097.123Mus_caroli
MGP_PahariEiJ_G0027929Trmt1l10097.671ENSMUSG00000053286Trmt1l10097.671Mus_musculus
MGP_PahariEiJ_G0027929Trmt1l8698.802MGP_SPRETEiJ_G0015500Trmt1l10098.802Mus_spretus
MGP_PahariEiJ_G0027929Trmt1l10082.609ENSMPUG00000011859TRMT1L10084.375Mustela_putorius_furo
MGP_PahariEiJ_G0027929Trmt1l10085.383ENSMLUG00000001136TRMT1L10085.519Myotis_lucifugus
MGP_PahariEiJ_G0027929Trmt1l10087.962ENSNGAG00000011685Trmt1l10086.395Nannospalax_galili
MGP_PahariEiJ_G0027929Trmt1l6166.667ENSNBRG00000004053trmt1l9365.772Neolamprologus_brichardi
MGP_PahariEiJ_G0027929Trmt1l10087.891ENSNLEG00000018030TRMT1L10087.891Nomascus_leucogenys
MGP_PahariEiJ_G0027929Trmt1l8368.841ENSMEUG00000011344TRMT1L8668.841Notamacropus_eugenii
MGP_PahariEiJ_G0027929Trmt1l8974.273ENSOPRG00000000680TRMT1L9974.273Ochotona_princeps
MGP_PahariEiJ_G0027929Trmt1l10081.284ENSODEG00000000826TRMT1L10080.926Octodon_degus
MGP_PahariEiJ_G0027929Trmt1l8859.908ENSONIG00000007823trmt1l10061.342Oreochromis_niloticus
MGP_PahariEiJ_G0027929Trmt1l8973.960ENSOANG00000001010TRMT1L9973.960Ornithorhynchus_anatinus
MGP_PahariEiJ_G0027929Trmt1l8985.015ENSOCUG00000004896TRMT1L9285.168Oryctolagus_cuniculus
MGP_PahariEiJ_G0027929Trmt1l8461.208ENSORLG00000029610trmt1l9562.963Oryzias_latipes
MGP_PahariEiJ_G0027929Trmt1l8461.208ENSORLG00020002203trmt1l9061.102Oryzias_latipes_hni
MGP_PahariEiJ_G0027929Trmt1l8461.675ENSORLG00015021512trmt1l9061.563Oryzias_latipes_hsok
MGP_PahariEiJ_G0027929Trmt1l7959.810ENSOMEG00000016275trmt1l8759.429Oryzias_melastigma
MGP_PahariEiJ_G0027929Trmt1l8875.617ENSOGAG00000016186TRMT1L9975.617Otolemur_garnettii
MGP_PahariEiJ_G0027929Trmt1l10086.043ENSOARG00000003786TRMT1L10085.772Ovis_aries
MGP_PahariEiJ_G0027929Trmt1l10087.619ENSPPAG00000029141TRMT1L10087.619Pan_paniscus
MGP_PahariEiJ_G0027929Trmt1l10085.986ENSPPRG00000023981TRMT1L10086.839Panthera_pardus
MGP_PahariEiJ_G0027929Trmt1l10086.122ENSPTIG00000021754TRMT1L10086.974Panthera_tigris_altaica
MGP_PahariEiJ_G0027929Trmt1l10087.619ENSPTRG00000001776TRMT1L10087.619Pan_troglodytes
MGP_PahariEiJ_G0027929Trmt1l9785.554ENSPANG00000020890TRMT1L10084.980Papio_anubis
MGP_PahariEiJ_G0027929Trmt1l9657.525ENSPKIG00000005941trmt1l9061.455Paramormyrops_kingsleyae
MGP_PahariEiJ_G0027929Trmt1l8874.383ENSPSIG00000010011TRMT1L9574.383Pelodiscus_sinensis
MGP_PahariEiJ_G0027929Trmt1l7456.239ENSPMGG00000021359trmt1l9556.600Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0027929Trmt1l9892.556ENSPEMG00000000031Trmt1l10092.339Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0027929Trmt1l8456.280ENSPMAG00000005838trmt1l10055.821Petromyzon_marinus
MGP_PahariEiJ_G0027929Trmt1l9971.662ENSPCIG00000002409TRMT1L8677.966Phascolarctos_cinereus
MGP_PahariEiJ_G0027929Trmt1l9158.174ENSPFOG00000003872trmt1l10060.964Poecilia_formosa
MGP_PahariEiJ_G0027929Trmt1l9158.174ENSPLAG00000010387trmt1l9359.447Poecilia_latipinna
MGP_PahariEiJ_G0027929Trmt1l9158.174ENSPMEG00000011828trmt1l9861.653Poecilia_mexicana
MGP_PahariEiJ_G0027929Trmt1l8859.418ENSPREG00000002866trmt1l9359.447Poecilia_reticulata
MGP_PahariEiJ_G0027929Trmt1l10087.347ENSPPYG00000000416TRMT1L10087.347Pongo_abelii
MGP_PahariEiJ_G0027929Trmt1l8785.600ENSPCAG00000008257TRMT1L8985.600Procavia_capensis
MGP_PahariEiJ_G0027929Trmt1l8679.703ENSPCOG00000005682TRMT1L9379.703Propithecus_coquereli
MGP_PahariEiJ_G0027929Trmt1l10077.341ENSPVAG00000005961TRMT1L10077.551Pteropus_vampyrus
MGP_PahariEiJ_G0027929Trmt1l8659.464ENSPNYG00000005607trmt1l9762.416Pundamilia_nyererei
MGP_PahariEiJ_G0027929Trmt1l8661.275ENSPNAG00000004389trmt1l9061.275Pygocentrus_nattereri
MGP_PahariEiJ_G0027929Trmt1l10094.658ENSRNOG00000002580Trmt1l10094.658Rattus_norvegicus
MGP_PahariEiJ_G0027929Trmt1l9787.623ENSRBIG00000042589TRMT1L10086.974Rhinopithecus_bieti
MGP_PahariEiJ_G0027929Trmt1l9787.623ENSRROG00000032183TRMT1L10086.974Rhinopithecus_roxellana
MGP_PahariEiJ_G0027929Trmt1l10086.803ENSSBOG00000029282TRMT1L10086.803Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0027929Trmt1l9059.736ENSSFOG00015004878trmt1l9162.133Scleropages_formosus
MGP_PahariEiJ_G0027929Trmt1l6168.539ENSSMAG00000015425trmt1l9268.539Scophthalmus_maximus
MGP_PahariEiJ_G0027929Trmt1l8960.182ENSSDUG00000021807trmt1l9664.055Seriola_dumerili
MGP_PahariEiJ_G0027929Trmt1l8561.760ENSSLDG00000016579trmt1l9663.884Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0027929Trmt1l6583.759ENSSARG00000010135TRMT1L8683.759Sorex_araneus
MGP_PahariEiJ_G0027929Trmt1l8078.351ENSSPUG00000003927TRMT1L9677.148Sphenodon_punctatus
MGP_PahariEiJ_G0027929Trmt1l8560.918ENSSPAG00000008597trmt1l9060.918Stegastes_partitus
MGP_PahariEiJ_G0027929Trmt1l9979.103ENSSSCG00000021393TRMT1L10079.434Sus_scrofa
MGP_PahariEiJ_G0027929Trmt1l8870.898ENSTGUG00000003737TRMT1L9670.898Taeniopygia_guttata
MGP_PahariEiJ_G0027929Trmt1l7575.000ENSTRUG00000002396trmt1l9575.000Takifugu_rubripes
MGP_PahariEiJ_G0027929Trmt1l5763.765ENSTNIG00000005534trmt1l9963.765Tetraodon_nigroviridis
MGP_PahariEiJ_G0027929Trmt1l8681.188ENSTBEG00000016498TRMT1L8681.188Tupaia_belangeri
MGP_PahariEiJ_G0027929Trmt1l10084.783ENSTTRG00000005892TRMT1L10084.783Tursiops_truncatus
MGP_PahariEiJ_G0027929Trmt1l10086.395ENSUAMG00000020936TRMT1L10086.974Ursus_americanus
MGP_PahariEiJ_G0027929Trmt1l9986.240ENSUMAG00000021919TRMT1L9986.821Ursus_maritimus
MGP_PahariEiJ_G0027929Trmt1l8987.768ENSVPAG00000011854TRMT1L10087.768Vicugna_pacos
MGP_PahariEiJ_G0027929Trmt1l10086.160ENSVVUG00000009166TRMT1L10086.839Vulpes_vulpes
MGP_PahariEiJ_G0027929Trmt1l7059.038ENSXETG00000004539trmt1l9558.414Xenopus_tropicalis
MGP_PahariEiJ_G0027929Trmt1l8061.670ENSXCOG00000007372trmt1l9161.670Xiphophorus_couchianus
MGP_PahariEiJ_G0027929Trmt1l9258.187ENSXMAG00000003575trmt1l9761.745Xiphophorus_maculatus

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