EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0027937 (Gene tree)
Gene ID: 110321477
Gene Symbol: Apobec4
Alias: 4933431M11Rik
Full Name: apolipoprotein B mRNA editing enzyme catalytic polypeptide like 4
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 5652 bases
Position: chr5:125779647-125785298
Accession: 110321477
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0075648	APOBEC_N	PF08210.11	7e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0075648	-	1566	XM_021197722	MGP_PahariEiJ_P0075648	374 (aa)	XP_021053381	UPI000A30FCE5

Gene Model

Click here to download MGP_PahariEiJ_G0027937's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0027937's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0027937	Apobec4	94	63.056	ENSG00000173627	APOBEC4	100	62.500	Homo_sapiens
MGP_PahariEiJ_G0027937	Apobec4	94	64.167	ENSAMEG00000002503	APOBEC4	97	63.784	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0027937	Apobec4	91	48.997	ENSACAG00000015192	APOBEC4	98	48.997	Anolis_carolinensis
MGP_PahariEiJ_G0027937	Apobec4	93	63.662	ENSBTAG00000047395	APOBEC4	99	62.398	Bos_taurus
MGP_PahariEiJ_G0027937	Apobec4	94	61.944	ENSCJAG00000040026	APOBEC4	99	61.308	Callithrix_jacchus
MGP_PahariEiJ_G0027937	Apobec4	94	61.389	ENSCAFG00000013349	APOBEC4	100	60.870	Canis_familiaris
MGP_PahariEiJ_G0027937	Apobec4	94	61.389	ENSCAFG00020015526	APOBEC4	100	60.870	Canis_lupus_dingo
MGP_PahariEiJ_G0027937	Apobec4	93	62.536	ENSCHIG00000011987	APOBEC4	95	60.833	Capra_hircus
MGP_PahariEiJ_G0027937	Apobec4	94	61.690	ENSCSAG00000000243	APOBEC4	100	60.714	Chlorocebus_sabaeus
MGP_PahariEiJ_G0027937	Apobec4	96	60.598	ENSCHOG00000012387	APOBEC4	100	60.598	Choloepus_hoffmanni
MGP_PahariEiJ_G0027937	Apobec4	94	46.409	ENSCPBG00000015714	APOBEC4	97	46.409	Chrysemys_picta_bellii
MGP_PahariEiJ_G0027937	Apobec4	89	71.856	ENSCGRG00001004553	Apobec4	96	71.856	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0027937	Apobec4	93	63.944	ENSDNOG00000044664	APOBEC4	100	62.331	Dasypus_novemcinctus
MGP_PahariEiJ_G0027937	Apobec4	94	60.227	ENSDORG00000007335	Apobec4	99	60.227	Dipodomys_ordii
MGP_PahariEiJ_G0027937	Apobec4	94	63.889	ENSEASG00005006513	APOBEC4	99	63.215	Equus_asinus_asinus
MGP_PahariEiJ_G0027937	Apobec4	94	64.167	ENSECAG00000019734	APOBEC4	99	63.488	Equus_caballus
MGP_PahariEiJ_G0027937	Apobec4	94	63.333	ENSFCAG00000010909	APOBEC4	100	63.686	Felis_catus
MGP_PahariEiJ_G0027937	Apobec4	83	63.522	ENSFDAG00000018185	APOBEC4	100	63.522	Fukomys_damarensis
MGP_PahariEiJ_G0027937	Apobec4	83	49.379	ENSGALG00000053078	APOBEC4	92	49.379	Gallus_gallus
MGP_PahariEiJ_G0027937	Apobec4	94	62.778	ENSGGOG00000042217	APOBEC4	100	61.789	Gorilla_gorilla
MGP_PahariEiJ_G0027937	Apobec4	96	44.032	ENSLACG00000014504	APOBEC4	99	44.032	Latimeria_chalumnae
MGP_PahariEiJ_G0027937	Apobec4	94	61.972	ENSMMUG00000031303	APOBEC4	100	60.989	Macaca_mulatta
MGP_PahariEiJ_G0027937	Apobec4	84	48.125	ENSMGAG00000017190	APOBEC4	94	48.125	Meleagris_gallopavo
MGP_PahariEiJ_G0027937	Apobec4	100	89.305	MGP_CAROLIEiJ_G0014701	Apobec4	100	89.305	Mus_caroli
MGP_PahariEiJ_G0027937	Apobec4	100	88.770	ENSMUSG00000055547	Apobec4	100	88.770	Mus_musculus
MGP_PahariEiJ_G0027937	Apobec4	100	87.433	MGP_SPRETEiJ_G0015508	Apobec4	100	87.433	Mus_spretus
MGP_PahariEiJ_G0027937	Apobec4	98	61.828	ENSMPUG00000011756	APOBEC4	100	63.172	Mustela_putorius_furo
MGP_PahariEiJ_G0027937	Apobec4	93	59.610	ENSMLUG00000002458	APOBEC4	100	60.705	Myotis_lucifugus
MGP_PahariEiJ_G0027937	Apobec4	94	58.571	ENSNGAG00000017599	Apobec4	100	57.939	Nannospalax_galili
MGP_PahariEiJ_G0027937	Apobec4	94	62.500	ENSNLEG00000035610	APOBEC4	100	61.518	Nomascus_leucogenys
MGP_PahariEiJ_G0027937	Apobec4	86	62.112	ENSODEG00000009778	APOBEC4	96	61.585	Octodon_degus
MGP_PahariEiJ_G0027937	Apobec4	91	50.857	ENSOANG00000001000	APOBEC4	99	49.591	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0027937	Apobec4	94	62.778	ENSOGAG00000003118	APOBEC4	99	61.957	Otolemur_garnettii
MGP_PahariEiJ_G0027937	Apobec4	93	61.972	ENSOARG00000005287	APOBEC4	99	60.763	Ovis_aries
MGP_PahariEiJ_G0027937	Apobec4	94	62.500	ENSPPAG00000038272	APOBEC4	100	61.944	Pan_paniscus
MGP_PahariEiJ_G0027937	Apobec4	94	63.889	ENSPPRG00000014706	APOBEC4	100	62.873	Panthera_pardus
MGP_PahariEiJ_G0027937	Apobec4	94	63.889	ENSPTIG00000005518	APOBEC4	100	62.873	Panthera_tigris_altaica
MGP_PahariEiJ_G0027937	Apobec4	94	61.944	ENSPTRG00000047181	APOBEC4	100	61.413	Pan_troglodytes
MGP_PahariEiJ_G0027937	Apobec4	93	73.121	ENSPEMG00000019164	Apobec4	100	72.145	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0027937	Apobec4	57	34.310	ENSPMAG00000006156	APOBEC4	64	34.310	Petromyzon_marinus
MGP_PahariEiJ_G0027937	Apobec4	91	55.556	ENSPCIG00000003817	APOBEC4	96	53.803	Phascolarctos_cinereus
MGP_PahariEiJ_G0027937	Apobec4	94	62.500	ENSPPYG00000000424	APOBEC4	100	61.518	Pongo_abelii
MGP_PahariEiJ_G0027937	Apobec4	94	47.500	ENSPCAG00000015174	APOBEC4	100	47.154	Procavia_capensis
MGP_PahariEiJ_G0027937	Apobec4	94	63.333	ENSPVAG00000001100	APOBEC4	100	64.130	Pteropus_vampyrus
MGP_PahariEiJ_G0027937	Apobec4	100	75.467	ENSRNOG00000028089	Apobec4	97	75.467	Rattus_norvegicus
MGP_PahariEiJ_G0027937	Apobec4	91	52.857	ENSSHAG00000013804	APOBEC4	100	50.678	Sarcophilus_harrisii
MGP_PahariEiJ_G0027937	Apobec4	98	46.757	ENSSPUG00000010884	APOBEC4	99	46.757	Sphenodon_punctatus
MGP_PahariEiJ_G0027937	Apobec4	96	61.853	ENSSSCG00000015561	APOBEC4	100	61.853	Sus_scrofa
MGP_PahariEiJ_G0027937	Apobec4	94	60.833	ENSTBEG00000006476	APOBEC4	100	60.218	Tupaia_belangeri
MGP_PahariEiJ_G0027937	Apobec4	94	64.067	ENSTTRG00000014784	APOBEC4	99	63.215	Tursiops_truncatus
MGP_PahariEiJ_G0027937	Apobec4	92	64.306	ENSUAMG00000005088	APOBEC4	100	62.772	Ursus_americanus
MGP_PahariEiJ_G0027937	Apobec4	92	64.306	ENSUMAG00000016285	APOBEC4	100	62.772	Ursus_maritimus
MGP_PahariEiJ_G0027937	Apobec4	94	61.667	ENSVVUG00000009054	APOBEC4	100	60.705	Vulpes_vulpes
MGP_PahariEiJ_G0027937	Apobec4	97	39.189	ENSXETG00000017441	apobec4	97	39.189	Xenopus_tropicalis