EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0028193 (Gene tree)
Gene ID: 110321758
Gene Symbol: Hnrnpu
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein U
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 13648 bases
Position: chr5:150511634-150525281
Accession: 110321758
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0076760	SAP	PF02037.27	2.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0076764	-	689	-	-	- (aa)	-	-
MGP_PahariEiJ_T0076761	-	703	-	-	- (aa)	-	-
MGP_PahariEiJ_T0076760	-	7596	-	MGP_PahariEiJ_P0076760	801 (aa)	XP_021053886	UPI000A3114E1
MGP_PahariEiJ_T0076763	-	863	-	-	- (aa)	-	-
MGP_PahariEiJ_T0076762	-	889	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0028193's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0028193's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0028193	Hnrnpu	55	58.636	MGP_PahariEiJ_G0021234	Hnrnpul1	61	51.215

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0028193	Hnrnpu	100	95.050	ENSG00000153187	HNRNPU	100	100.000	Homo_sapiens
MGP_PahariEiJ_G0028193	Hnrnpu	75	56.287	ENSAPOG00000017400	hnrnpub	81	57.829	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0028193	Hnrnpu	100	91.981	ENSAMEG00000009145	HNRNPU	100	91.616	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0028193	Hnrnpu	99	50.792	ENSACIG00000012138	hnrnpub	89	71.930	Amphilophus_citrinellus
MGP_PahariEiJ_G0028193	Hnrnpu	80	86.047	ENSAOCG00000015843	hnrnpub	81	57.829	Amphiprion_ocellaris
MGP_PahariEiJ_G0028193	Hnrnpu	80	86.047	ENSAPEG00000014679	hnrnpub	81	57.829	Amphiprion_percula
MGP_PahariEiJ_G0028193	Hnrnpu	69	61.239	ENSATEG00000016178	hnrnpub	72	59.174	Anabas_testudineus
MGP_PahariEiJ_G0028193	Hnrnpu	81	82.396	ENSACAG00000004511	HNRNPU	72	89.185	Anolis_carolinensis
MGP_PahariEiJ_G0028193	Hnrnpu	100	95.268	ENSANAG00000033895	-	100	94.802	Aotus_nancymaae
MGP_PahariEiJ_G0028193	Hnrnpu	73	59.574	ENSACLG00000008165	hnrnpub	86	78.723	Astatotilapia_calliptera
MGP_PahariEiJ_G0028193	Hnrnpu	98	95.702	ENSBTAG00000007606	HNRNPU	98	95.702	Bos_taurus
MGP_PahariEiJ_G0028193	Hnrnpu	100	93.229	ENSCJAG00000016914	HNRNPU	100	93.229	Callithrix_jacchus
MGP_PahariEiJ_G0028193	Hnrnpu	100	95.792	ENSCAFG00020000918	HNRNPU	100	95.792	Canis_lupus_dingo
MGP_PahariEiJ_G0028193	Hnrnpu	100	95.792	ENSCHIG00000004900	HNRNPU	100	95.792	Capra_hircus
MGP_PahariEiJ_G0028193	Hnrnpu	100	93.811	ENSCPOG00000011887	HNRNPU	100	93.811	Cavia_porcellus
MGP_PahariEiJ_G0028193	Hnrnpu	100	95.517	ENSCCAG00000037859	-	99	97.368	Cebus_capucinus
MGP_PahariEiJ_G0028193	Hnrnpu	100	94.894	ENSCATG00000035273	HNRNPU	100	94.770	Cercocebus_atys
MGP_PahariEiJ_G0028193	Hnrnpu	100	94.053	ENSCLAG00000007100	HNRNPU	100	94.053	Chinchilla_lanigera
MGP_PahariEiJ_G0028193	Hnrnpu	100	94.802	ENSCSAG00000009219	HNRNPU	100	94.678	Chlorocebus_sabaeus
MGP_PahariEiJ_G0028193	Hnrnpu	81	93.333	ENSCHOG00000001387	HNRNPU	79	93.333	Choloepus_hoffmanni
MGP_PahariEiJ_G0028193	Hnrnpu	100	77.619	ENSCPBG00000009415	HNRNPU	98	79.099	Chrysemys_picta_bellii
MGP_PahariEiJ_G0028193	Hnrnpu	100	92.528	ENSCANG00000022780	HNRNPU	100	92.403	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0028193	Hnrnpu	100	98.127	ENSCGRG00001020525	Hnrnpu	100	98.127	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0028193	Hnrnpu	83	78.261	ENSCSEG00000010804	hnrnpub	86	78.261	Cynoglossus_semilaevis
MGP_PahariEiJ_G0028193	Hnrnpu	82	71.429	ENSCVAG00000004280	hnrnpub	85	71.429	Cyprinodon_variegatus
MGP_PahariEiJ_G0028193	Hnrnpu	82	61.103	ENSDARG00000004735	hnrnpub	90	58.994	Danio_rerio
MGP_PahariEiJ_G0028193	Hnrnpu	81	64.706	ENSDARG00000015206	hnrnpua	89	64.706	Danio_rerio
MGP_PahariEiJ_G0028193	Hnrnpu	80	98.319	ENSDNOG00000000215	HNRNPU	91	98.319	Dasypus_novemcinctus
MGP_PahariEiJ_G0028193	Hnrnpu	100	92.164	ENSDORG00000015491	Hnrnpu	100	91.418	Dipodomys_ordii
MGP_PahariEiJ_G0028193	Hnrnpu	100	90.594	ENSETEG00000014565	HNRNPU	100	89.604	Echinops_telfairi
MGP_PahariEiJ_G0028193	Hnrnpu	100	95.668	ENSEASG00005003017	HNRNPU	100	95.668	Equus_asinus_asinus
MGP_PahariEiJ_G0028193	Hnrnpu	100	95.545	ENSECAG00000007955	HNRNPU	100	95.545	Equus_caballus
MGP_PahariEiJ_G0028193	Hnrnpu	99	50.305	ENSELUG00000011966	hnrnpua	58	71.990	Esox_lucius
MGP_PahariEiJ_G0028193	Hnrnpu	76	57.001	ENSELUG00000010733	hnrnpub	62	65.568	Esox_lucius
MGP_PahariEiJ_G0028193	Hnrnpu	100	94.672	ENSFCAG00000002156	HNRNPU	99	94.548	Felis_catus
MGP_PahariEiJ_G0028193	Hnrnpu	83	97.980	ENSFDAG00000006026	HNRNPU	100	97.980	Fukomys_damarensis
MGP_PahariEiJ_G0028193	Hnrnpu	75	53.936	ENSFHEG00000022639	hnrnpub	62	60.074	Fundulus_heteroclitus
MGP_PahariEiJ_G0028193	Hnrnpu	74	58.240	ENSGMOG00000001755	hnrnpub	77	60.066	Gadus_morhua
MGP_PahariEiJ_G0028193	Hnrnpu	100	77.712	ENSGALG00000010671	HNRNPU	100	77.032	Gallus_gallus
MGP_PahariEiJ_G0028193	Hnrnpu	76	53.235	ENSGAFG00000009369	hnrnpub	79	55.690	Gambusia_affinis
MGP_PahariEiJ_G0028193	Hnrnpu	78	58.104	ENSGACG00000004679	hnrnpub	73	60.762	Gasterosteus_aculeatus
MGP_PahariEiJ_G0028193	Hnrnpu	100	94.770	ENSGGOG00000004061	HNRNPU	100	94.521	Gorilla_gorilla
MGP_PahariEiJ_G0028193	Hnrnpu	81	78.723	ENSHBUG00000012290	hnrnpub	86	78.723	Haplochromis_burtoni
MGP_PahariEiJ_G0028193	Hnrnpu	100	95.901	ENSHGLG00000010594	-	100	95.901	Heterocephalus_glaber_female
MGP_PahariEiJ_G0028193	Hnrnpu	82	98.319	ENSHGLG00100015093	HNRNPU	100	98.319	Heterocephalus_glaber_male
MGP_PahariEiJ_G0028193	Hnrnpu	79	83.333	ENSHCOG00000020091	hnrnpub	84	74.000	Hippocampus_comes
MGP_PahariEiJ_G0028193	Hnrnpu	78	83.721	ENSIPUG00000007749	hnrnpu	92	68.421	Ictalurus_punctatus
MGP_PahariEiJ_G0028193	Hnrnpu	100	93.074	ENSJJAG00000011371	Hnrnpu	100	92.953	Jaculus_jaculus
MGP_PahariEiJ_G0028193	Hnrnpu	99	49.773	ENSKMAG00000004532	hnrnpub	80	54.737	Kryptolebias_marmoratus
MGP_PahariEiJ_G0028193	Hnrnpu	75	56.250	ENSLBEG00000022520	hnrnpub	80	55.672	Labrus_bergylta
MGP_PahariEiJ_G0028193	Hnrnpu	99	61.595	ENSLACG00000017463	HNRNPU	99	61.710	Latimeria_chalumnae
MGP_PahariEiJ_G0028193	Hnrnpu	83	64.358	ENSLOCG00000016652	hnrnpua	76	66.303	Lepisosteus_oculatus
MGP_PahariEiJ_G0028193	Hnrnpu	100	94.770	ENSLAFG00000021377	HNRNPU	100	93.773	Loxodonta_africana
MGP_PahariEiJ_G0028193	Hnrnpu	100	94.894	ENSMFAG00000037308	HNRNPU	100	94.770	Macaca_fascicularis
MGP_PahariEiJ_G0028193	Hnrnpu	100	95.143	ENSMMUG00000021098	HNRNPU	100	95.019	Macaca_mulatta
MGP_PahariEiJ_G0028193	Hnrnpu	100	94.894	ENSMNEG00000043645	HNRNPU	100	94.770	Macaca_nemestrina
MGP_PahariEiJ_G0028193	Hnrnpu	74	59.040	ENSMZEG00005003185	hnrnpub	86	78.723	Maylandia_zebra
MGP_PahariEiJ_G0028193	Hnrnpu	100	98.377	ENSMAUG00000008842	Hnrnpu	100	98.377	Mesocricetus_auratus
MGP_PahariEiJ_G0028193	Hnrnpu	100	94.894	ENSMICG00000004616	HNRNPU	100	94.147	Microcebus_murinus
MGP_PahariEiJ_G0028193	Hnrnpu	100	98.127	ENSMOCG00000015623	Hnrnpu	100	98.127	Microtus_ochrogaster
MGP_PahariEiJ_G0028193	Hnrnpu	100	87.089	ENSMODG00000006515	HNRNPU	100	86.033	Monodelphis_domestica
MGP_PahariEiJ_G0028193	Hnrnpu	97	52.451	ENSMALG00000018243	hnrnpub	75	83.721	Monopterus_albus
MGP_PahariEiJ_G0028193	Hnrnpu	100	99.001	MGP_CAROLIEiJ_G0014962	Hnrnpu	100	99.001	Mus_caroli
MGP_PahariEiJ_G0028193	Hnrnpu	100	99.126	ENSMUSG00000039630	Hnrnpu	100	99.126	Mus_musculus
MGP_PahariEiJ_G0028193	Hnrnpu	100	99.126	MGP_SPRETEiJ_G0015761	Hnrnpu	100	99.126	Mus_spretus
MGP_PahariEiJ_G0028193	Hnrnpu	100	88.366	ENSMLUG00000000475	HNRNPU	100	87.871	Myotis_lucifugus
MGP_PahariEiJ_G0028193	Hnrnpu	100	97.007	ENSNGAG00000019075	Hnrnpu	100	97.007	Nannospalax_galili
MGP_PahariEiJ_G0028193	Hnrnpu	99	84.318	ENSMEUG00000000541	HNRNPU	100	83.595	Notamacropus_eugenii
MGP_PahariEiJ_G0028193	Hnrnpu	70	95.588	ENSODEG00000014458	-	100	95.588	Octodon_degus
MGP_PahariEiJ_G0028193	Hnrnpu	81	78.723	ENSONIG00000001260	hnrnpub	89	78.723	Oreochromis_niloticus
MGP_PahariEiJ_G0028193	Hnrnpu	98	93.457	ENSOCUG00000014469	HNRNPU	93	93.457	Oryctolagus_cuniculus
MGP_PahariEiJ_G0028193	Hnrnpu	80	83.721	ENSORLG00020005363	hnrnpub	86	83.721	Oryzias_latipes_hni
MGP_PahariEiJ_G0028193	Hnrnpu	80	83.721	ENSORLG00015001190	hnrnpub	86	83.721	Oryzias_latipes_hsok
MGP_PahariEiJ_G0028193	Hnrnpu	80	83.721	ENSOMEG00000014951	hnrnpub	86	83.721	Oryzias_melastigma
MGP_PahariEiJ_G0028193	Hnrnpu	100	95.050	ENSOGAG00000014024	HNRNPU	100	94.183	Otolemur_garnettii
MGP_PahariEiJ_G0028193	Hnrnpu	82	97.655	ENSOARG00000004985	HNRNPU	91	97.651	Ovis_aries
MGP_PahariEiJ_G0028193	Hnrnpu	100	96.015	ENSPPAG00000038652	HNRNPU	100	96.015	Pan_paniscus
MGP_PahariEiJ_G0028193	Hnrnpu	100	93.229	ENSPPRG00000002662	HNRNPU	100	93.229	Panthera_pardus
MGP_PahariEiJ_G0028193	Hnrnpu	100	96.015	ENSPTRG00000002182	HNRNPU	100	96.015	Pan_troglodytes
MGP_PahariEiJ_G0028193	Hnrnpu	100	94.894	ENSPANG00000011643	HNRNPU	100	94.770	Papio_anubis
MGP_PahariEiJ_G0028193	Hnrnpu	75	66.035	ENSPKIG00000022332	hnrnpub	78	62.980	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0028193	Hnrnpu	75	64.055	ENSPKIG00000006885	hnrnpua	78	66.348	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0028193	Hnrnpu	100	89.035	ENSPCIG00000008657	HNRNPU	100	87.485	Phascolarctos_cinereus
MGP_PahariEiJ_G0028193	Hnrnpu	76	53.235	ENSPFOG00000002908	hnrnpub	80	55.690	Poecilia_formosa
MGP_PahariEiJ_G0028193	Hnrnpu	76	53.891	ENSPLAG00000004160	hnrnpub	80	55.860	Poecilia_latipinna
MGP_PahariEiJ_G0028193	Hnrnpu	100	90.099	ENSPCOG00000003883	-	100	90.347	Propithecus_coquereli
MGP_PahariEiJ_G0028193	Hnrnpu	100	93.913	ENSPCOG00000018655	-	100	93.168	Propithecus_coquereli
MGP_PahariEiJ_G0028193	Hnrnpu	100	93.229	ENSPVAG00000002581	HNRNPU	100	93.229	Pteropus_vampyrus
MGP_PahariEiJ_G0028193	Hnrnpu	99	56.826	ENSPNAG00000001055	hnrnpub	79	64.082	Pygocentrus_nattereri
MGP_PahariEiJ_G0028193	Hnrnpu	100	98.627	ENSRNOG00000033790	Hnrnpu	100	98.627	Rattus_norvegicus
MGP_PahariEiJ_G0028193	Hnrnpu	100	94.770	ENSRBIG00000031519	HNRNPU	100	94.147	Rhinopithecus_bieti
MGP_PahariEiJ_G0028193	Hnrnpu	100	95.050	ENSRROG00000041642	HNRNPU	100	94.678	Rhinopithecus_roxellana
MGP_PahariEiJ_G0028193	Hnrnpu	99	59.053	ENSSFOG00015001124	hnrnpub	78	63.511	Scleropages_formosus
MGP_PahariEiJ_G0028193	Hnrnpu	94	59.895	ENSSFOG00015019004	hnrnpu	77	67.252	Scleropages_formosus
MGP_PahariEiJ_G0028193	Hnrnpu	69	61.239	ENSSMAG00000003607	hnrnpub	77	53.021	Scophthalmus_maximus
MGP_PahariEiJ_G0028193	Hnrnpu	75	54.905	ENSSDUG00000005912	hnrnpub	79	56.072	Seriola_dumerili
MGP_PahariEiJ_G0028193	Hnrnpu	75	54.758	ENSSLDG00000004899	hnrnpub	79	55.922	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0028193	Hnrnpu	100	77.208	ENSSPUG00000011393	HNRNPU	100	78.151	Sphenodon_punctatus
MGP_PahariEiJ_G0028193	Hnrnpu	69	60.924	ENSSPAG00000011853	hnrnpub	80	56.391	Stegastes_partitus
MGP_PahariEiJ_G0028193	Hnrnpu	100	94.678	ENSSSCG00000010877	HNRNPU	100	94.926	Sus_scrofa
MGP_PahariEiJ_G0028193	Hnrnpu	75	56.805	ENSTRUG00000007759	hnrnpub	79	54.795	Takifugu_rubripes
MGP_PahariEiJ_G0028193	Hnrnpu	80	76.744	ENSTNIG00000009725	hnrnpub	90	76.744	Tetraodon_nigroviridis
MGP_PahariEiJ_G0028193	Hnrnpu	70	97.980	ENSTTRG00000005281	HNRNPU	71	97.980	Tursiops_truncatus
MGP_PahariEiJ_G0028193	Hnrnpu	100	93.591	ENSUAMG00000021120	HNRNPU	100	93.591	Ursus_americanus
MGP_PahariEiJ_G0028193	Hnrnpu	99	83.787	ENSUMAG00000012322	HNRNPU	97	93.772	Ursus_maritimus
MGP_PahariEiJ_G0028193	Hnrnpu	79	91.541	ENSVPAG00000010520	HNRNPU	91	91.541	Vicugna_pacos
MGP_PahariEiJ_G0028193	Hnrnpu	100	95.792	ENSVVUG00000026524	HNRNPU	100	95.792	Vulpes_vulpes
MGP_PahariEiJ_G0028193	Hnrnpu	99	66.626	ENSXETG00000011386	hnrnpu	99	67.922	Xenopus_tropicalis
MGP_PahariEiJ_G0028193	Hnrnpu	76	53.235	ENSXMAG00000010356	hnrnpub	80	55.690	Xiphophorus_maculatus