EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0028318 (Gene tree)
Gene ID: 110322910
Gene Symbol: Ncbp1
Alias: -
Full Name: nuclear cap binding protein subunit 1
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 35033 bases
Position: chr6:748148-783180
Accession: 110322910
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0077382	MIF4G_like	PF09088.11	7.4e-35	1	1
MGP_PahariEiJ_P0077382	MIF4G_like_2	PF09090.11	9.6e-84	1	1
MGP_PahariEiJ_P0077382	MIF4G	PF02854.19	7.6e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0077382	-	3011	XM_021199849	MGP_PahariEiJ_P0077382	790 (aa)	XP_021055508	UPI000A305336
MGP_PahariEiJ_T0077384	-	476	-	-	- (aa)	-	-
MGP_PahariEiJ_T0077385	-	781	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0028318's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0028318's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0028318	Ncbp1	100	98.228	ENSG00000136937	NCBP1	100	98.228	Homo_sapiens
MGP_PahariEiJ_G0028318	Ncbp1	99	83.375	ENSAPOG00000008002	NCBP1	99	82.997	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0028318	Ncbp1	100	98.232	ENSAMEG00000004763	NCBP1	100	98.232	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0028318	Ncbp1	99	83.733	ENSACIG00000000274	NCBP1	99	83.102	Amphilophus_citrinellus
MGP_PahariEiJ_G0028318	Ncbp1	99	83.501	ENSAOCG00000021148	NCBP1	99	83.123	Amphiprion_ocellaris
MGP_PahariEiJ_G0028318	Ncbp1	99	83.501	ENSAPEG00000001701	NCBP1	99	83.123	Amphiprion_percula
MGP_PahariEiJ_G0028318	Ncbp1	99	82.746	ENSATEG00000006929	NCBP1	99	82.368	Anabas_testudineus
MGP_PahariEiJ_G0028318	Ncbp1	95	90.225	ENSAPLG00000016318	NCBP1	100	90.357	Anas_platyrhynchos
MGP_PahariEiJ_G0028318	Ncbp1	100	86.517	ENSACAG00000004409	NCBP1	87	86.392	Anolis_carolinensis
MGP_PahariEiJ_G0028318	Ncbp1	100	95.316	ENSANAG00000025744	NCBP1	99	98.322	Aotus_nancymaae
MGP_PahariEiJ_G0028318	Ncbp1	99	82.997	ENSACLG00000014812	NCBP1	99	82.961	Astatotilapia_calliptera
MGP_PahariEiJ_G0028318	Ncbp1	99	81.658	ENSAMXG00000016364	NCBP1	99	81.156	Astyanax_mexicanus
MGP_PahariEiJ_G0028318	Ncbp1	100	98.101	ENSBTAG00000009732	NCBP1	100	98.101	Bos_taurus
MGP_PahariEiJ_G0028318	Ncbp1	99	34.402	WBGene00018156	ncbp-1	99	34.279	Caenorhabditis_elegans
MGP_PahariEiJ_G0028318	Ncbp1	100	98.481	ENSCJAG00000010840	NCBP1	100	98.678	Callithrix_jacchus
MGP_PahariEiJ_G0028318	Ncbp1	100	98.354	ENSCAFG00000002445	NCBP1	100	98.354	Canis_familiaris
MGP_PahariEiJ_G0028318	Ncbp1	99	97.592	ENSCAFG00020017997	NCBP1	100	98.243	Canis_lupus_dingo
MGP_PahariEiJ_G0028318	Ncbp1	100	97.848	ENSCHIG00000020139	NCBP1	100	97.848	Capra_hircus
MGP_PahariEiJ_G0028318	Ncbp1	52	96.845	ENSTSYG00000011914	NCBP1	98	99.060	Carlito_syrichta
MGP_PahariEiJ_G0028318	Ncbp1	81	87.969	ENSCAPG00000014252	NCBP1	90	87.812	Cavia_aperea
MGP_PahariEiJ_G0028318	Ncbp1	97	96.349	ENSCPOG00000012573	NCBP1	99	96.349	Cavia_porcellus
MGP_PahariEiJ_G0028318	Ncbp1	100	98.354	ENSCCAG00000032297	NCBP1	100	98.354	Cebus_capucinus
MGP_PahariEiJ_G0028318	Ncbp1	100	98.228	ENSCATG00000010052	NCBP1	100	98.228	Cercocebus_atys
MGP_PahariEiJ_G0028318	Ncbp1	100	98.228	ENSCLAG00000014339	NCBP1	100	98.228	Chinchilla_lanigera
MGP_PahariEiJ_G0028318	Ncbp1	100	98.228	ENSCSAG00000010929	NCBP1	100	98.228	Chlorocebus_sabaeus
MGP_PahariEiJ_G0028318	Ncbp1	91	96.610	ENSCHOG00000010332	NCBP1	91	96.610	Choloepus_hoffmanni
MGP_PahariEiJ_G0028318	Ncbp1	100	85.786	ENSCPBG00000024344	NCBP1	99	90.278	Chrysemys_picta_bellii
MGP_PahariEiJ_G0028318	Ncbp1	99	53.553	ENSCING00000008990	-	98	53.299	Ciona_intestinalis
MGP_PahariEiJ_G0028318	Ncbp1	99	52.179	ENSCSAVG00000005300	-	99	53.927	Ciona_savignyi
MGP_PahariEiJ_G0028318	Ncbp1	100	98.228	ENSCANG00000036913	NCBP1	100	98.228	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0028318	Ncbp1	100	99.114	ENSCGRG00001015771	Ncbp1	100	99.114	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0028318	Ncbp1	99	99.103	ENSCGRG00000010311	Ncbp1	100	99.103	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0028318	Ncbp1	99	82.494	ENSCSEG00000012377	NCBP1	99	82.937	Cynoglossus_semilaevis
MGP_PahariEiJ_G0028318	Ncbp1	99	80.881	ENSCVAG00000008795	NCBP1	99	81.509	Cyprinodon_variegatus
MGP_PahariEiJ_G0028318	Ncbp1	100	97.342	ENSDNOG00000006885	NCBP1	100	97.342	Dasypus_novemcinctus
MGP_PahariEiJ_G0028318	Ncbp1	100	93.829	ENSDORG00000013652	Ncbp1	100	93.829	Dipodomys_ordii
MGP_PahariEiJ_G0028318	Ncbp1	83	33.137	FBgn0038887	CG7907	87	33.137	Drosophila_melanogaster
MGP_PahariEiJ_G0028318	Ncbp1	100	56.894	FBgn0022942	Cbp80	100	57.375	Drosophila_melanogaster
MGP_PahariEiJ_G0028318	Ncbp1	89	93.886	ENSETEG00000009705	NCBP1	89	93.886	Echinops_telfairi
MGP_PahariEiJ_G0028318	Ncbp1	100	73.459	ENSEBUG00000008386	NCBP1	100	73.208	Eptatretus_burgeri
MGP_PahariEiJ_G0028318	Ncbp1	100	97.848	ENSEASG00005022795	NCBP1	100	97.848	Equus_asinus_asinus
MGP_PahariEiJ_G0028318	Ncbp1	100	97.975	ENSECAG00000013847	NCBP1	100	97.975	Equus_caballus
MGP_PahariEiJ_G0028318	Ncbp1	95	93.493	ENSEEUG00000015973	NCBP1	99	93.094	Erinaceus_europaeus
MGP_PahariEiJ_G0028318	Ncbp1	99	80.252	ENSELUG00000022519	NCBP1	99	81.006	Esox_lucius
MGP_PahariEiJ_G0028318	Ncbp1	100	98.228	ENSFCAG00000001206	NCBP1	100	98.228	Felis_catus
MGP_PahariEiJ_G0028318	Ncbp1	98	89.059	ENSFALG00000001193	NCBP1	100	89.186	Ficedula_albicollis
MGP_PahariEiJ_G0028318	Ncbp1	100	97.975	ENSFDAG00000010864	NCBP1	100	97.975	Fukomys_damarensis
MGP_PahariEiJ_G0028318	Ncbp1	99	82.264	ENSFHEG00000000655	NCBP1	99	81.761	Fundulus_heteroclitus
MGP_PahariEiJ_G0028318	Ncbp1	99	79.245	ENSGMOG00000008653	NCBP1	99	79.245	Gadus_morhua
MGP_PahariEiJ_G0028318	Ncbp1	98	90.244	ENSGALG00000002087	NCBP1	100	89.786	Gallus_gallus
MGP_PahariEiJ_G0028318	Ncbp1	99	82.890	ENSGAFG00000017787	NCBP1	99	82.763	Gambusia_affinis
MGP_PahariEiJ_G0028318	Ncbp1	99	81.681	ENSGACG00000016772	NCBP1	98	81.305	Gasterosteus_aculeatus
MGP_PahariEiJ_G0028318	Ncbp1	100	88.428	ENSGAGG00000019483	NCBP1	99	90.000	Gopherus_agassizii
MGP_PahariEiJ_G0028318	Ncbp1	100	98.228	ENSGGOG00000001376	NCBP1	100	98.228	Gorilla_gorilla
MGP_PahariEiJ_G0028318	Ncbp1	99	82.997	ENSHBUG00000020843	NCBP1	99	82.620	Haplochromis_burtoni
MGP_PahariEiJ_G0028318	Ncbp1	100	85.732	ENSHGLG00000018112	-	100	85.732	Heterocephalus_glaber_female
MGP_PahariEiJ_G0028318	Ncbp1	100	98.101	ENSHGLG00000001882	NCBP1	100	98.101	Heterocephalus_glaber_female
MGP_PahariEiJ_G0028318	Ncbp1	100	85.480	ENSHGLG00100017373	-	100	85.480	Heterocephalus_glaber_male
MGP_PahariEiJ_G0028318	Ncbp1	100	98.101	ENSHGLG00100013014	NCBP1	100	98.101	Heterocephalus_glaber_male
MGP_PahariEiJ_G0028318	Ncbp1	79	72.108	ENSHCOG00000000204	NCBP1	92	72.108	Hippocampus_comes
MGP_PahariEiJ_G0028318	Ncbp1	99	81.887	ENSIPUG00000007275	ncbp1	99	81.509	Ictalurus_punctatus
MGP_PahariEiJ_G0028318	Ncbp1	100	98.354	ENSSTOG00000002695	NCBP1	100	98.354	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0028318	Ncbp1	99	82.368	ENSKMAG00000003594	NCBP1	99	85.976	Kryptolebias_marmoratus
MGP_PahariEiJ_G0028318	Ncbp1	99	80.870	ENSLBEG00000011661	NCBP1	99	80.373	Labrus_bergylta
MGP_PahariEiJ_G0028318	Ncbp1	100	79.726	ENSLACG00000013955	NCBP1	100	79.229	Latimeria_chalumnae
MGP_PahariEiJ_G0028318	Ncbp1	99	71.945	ENSLOCG00000009579	NCBP1	99	71.945	Lepisosteus_oculatus
MGP_PahariEiJ_G0028318	Ncbp1	100	97.848	ENSLAFG00000005999	NCBP1	100	97.848	Loxodonta_africana
MGP_PahariEiJ_G0028318	Ncbp1	100	98.228	ENSMFAG00000030994	NCBP1	100	98.228	Macaca_fascicularis
MGP_PahariEiJ_G0028318	Ncbp1	99	98.331	ENSMMUG00000012281	NCBP1	99	98.331	Macaca_mulatta
MGP_PahariEiJ_G0028318	Ncbp1	100	98.228	ENSMNEG00000042790	NCBP1	100	98.228	Macaca_nemestrina
MGP_PahariEiJ_G0028318	Ncbp1	100	98.228	ENSMLEG00000030374	NCBP1	100	98.228	Mandrillus_leucophaeus
MGP_PahariEiJ_G0028318	Ncbp1	99	83.123	ENSMAMG00000014806	NCBP1	99	82.620	Mastacembelus_armatus
MGP_PahariEiJ_G0028318	Ncbp1	97	82.682	ENSMZEG00005009290	-	99	82.552	Maylandia_zebra
MGP_PahariEiJ_G0028318	Ncbp1	99	82.997	ENSMZEG00005003469	NCBP1	99	82.620	Maylandia_zebra
MGP_PahariEiJ_G0028318	Ncbp1	99	98.346	ENSMAUG00000020583	Ncbp1	99	98.346	Mesocricetus_auratus
MGP_PahariEiJ_G0028318	Ncbp1	100	97.848	ENSMICG00000012682	NCBP1	100	97.848	Microcebus_murinus
MGP_PahariEiJ_G0028318	Ncbp1	100	98.734	ENSMOCG00000015818	Ncbp1	100	98.734	Microtus_ochrogaster
MGP_PahariEiJ_G0028318	Ncbp1	91	82.378	ENSMMOG00000002610	NCBP1	99	82.238	Mola_mola
MGP_PahariEiJ_G0028318	Ncbp1	100	93.291	ENSMODG00000003202	NCBP1	99	93.038	Monodelphis_domestica
MGP_PahariEiJ_G0028318	Ncbp1	99	82.368	ENSMALG00000003547	NCBP1	99	81.864	Monopterus_albus
MGP_PahariEiJ_G0028318	Ncbp1	100	99.620	MGP_CAROLIEiJ_G0025982	Ncbp1	100	99.620	Mus_caroli
MGP_PahariEiJ_G0028318	Ncbp1	100	99.620	ENSMUSG00000028330	Ncbp1	100	99.620	Mus_musculus
MGP_PahariEiJ_G0028318	Ncbp1	100	99.620	MGP_SPRETEiJ_G0026945	Ncbp1	100	99.620	Mus_spretus
MGP_PahariEiJ_G0028318	Ncbp1	100	98.354	ENSMPUG00000006399	NCBP1	100	98.354	Mustela_putorius_furo
MGP_PahariEiJ_G0028318	Ncbp1	99	97.176	ENSMLUG00000015201	NCBP1	100	97.176	Myotis_lucifugus
MGP_PahariEiJ_G0028318	Ncbp1	100	98.861	ENSNGAG00000014101	Ncbp1	100	98.861	Nannospalax_galili
MGP_PahariEiJ_G0028318	Ncbp1	73	86.784	ENSNBRG00000014674	NCBP1	94	86.784	Neolamprologus_brichardi
MGP_PahariEiJ_G0028318	Ncbp1	100	98.228	ENSNLEG00000016909	NCBP1	100	98.228	Nomascus_leucogenys
MGP_PahariEiJ_G0028318	Ncbp1	89	95.045	ENSMEUG00000010672	NCBP1	90	92.793	Notamacropus_eugenii
MGP_PahariEiJ_G0028318	Ncbp1	84	91.356	ENSOPRG00000002144	-	88	91.356	Ochotona_princeps
MGP_PahariEiJ_G0028318	Ncbp1	100	97.975	ENSODEG00000003232	NCBP1	100	97.975	Octodon_degus
MGP_PahariEiJ_G0028318	Ncbp1	99	82.997	ENSONIG00000001502	NCBP1	99	82.620	Oreochromis_niloticus
MGP_PahariEiJ_G0028318	Ncbp1	79	95.024	ENSOANG00000001918	NCBP1	100	95.024	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0028318	Ncbp1	98	97.558	ENSOCUG00000013853	NCBP1	97	97.558	Oryctolagus_cuniculus
MGP_PahariEiJ_G0028318	Ncbp1	99	81.203	ENSORLG00000011008	NCBP1	99	80.827	Oryzias_latipes
MGP_PahariEiJ_G0028318	Ncbp1	99	81.203	ENSORLG00020017455	NCBP1	99	80.827	Oryzias_latipes_hni
MGP_PahariEiJ_G0028318	Ncbp1	99	81.328	ENSORLG00015012127	NCBP1	99	80.952	Oryzias_latipes_hsok
MGP_PahariEiJ_G0028318	Ncbp1	99	81.704	ENSOMEG00000020698	NCBP1	99	81.579	Oryzias_melastigma
MGP_PahariEiJ_G0028318	Ncbp1	100	98.232	ENSOGAG00000013888	NCBP1	100	98.232	Otolemur_garnettii
MGP_PahariEiJ_G0028318	Ncbp1	100	97.848	ENSOARG00000011233	NCBP1	100	97.848	Ovis_aries
MGP_PahariEiJ_G0028318	Ncbp1	100	98.228	ENSPPAG00000026462	NCBP1	100	98.228	Pan_paniscus
MGP_PahariEiJ_G0028318	Ncbp1	100	98.354	ENSPPRG00000022574	NCBP1	100	98.354	Panthera_pardus
MGP_PahariEiJ_G0028318	Ncbp1	100	98.354	ENSPTIG00000018507	NCBP1	100	98.354	Panthera_tigris_altaica
MGP_PahariEiJ_G0028318	Ncbp1	100	98.228	ENSPTRG00000021167	NCBP1	100	98.228	Pan_troglodytes
MGP_PahariEiJ_G0028318	Ncbp1	100	98.228	ENSPANG00000025591	NCBP1	100	98.228	Papio_anubis
MGP_PahariEiJ_G0028318	Ncbp1	100	80.755	ENSPKIG00000015861	NCBP1	100	80.629	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0028318	Ncbp1	64	88.281	ENSPSIG00000009558	NCBP1	100	88.477	Pelodiscus_sinensis
MGP_PahariEiJ_G0028318	Ncbp1	99	79.345	ENSPMGG00000020476	NCBP1	99	78.841	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0028318	Ncbp1	100	98.608	ENSPEMG00000020105	Ncbp1	100	98.608	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0028318	Ncbp1	100	67.544	ENSPMAG00000005533	NCBP1	100	67.544	Petromyzon_marinus
MGP_PahariEiJ_G0028318	Ncbp1	100	93.038	ENSPCIG00000015800	NCBP1	99	93.699	Phascolarctos_cinereus
MGP_PahariEiJ_G0028318	Ncbp1	99	82.080	ENSPFOG00000004158	NCBP1	99	81.704	Poecilia_formosa
MGP_PahariEiJ_G0028318	Ncbp1	99	82.516	ENSPLAG00000020002	NCBP1	99	82.138	Poecilia_latipinna
MGP_PahariEiJ_G0028318	Ncbp1	99	82.516	ENSPMEG00000019821	NCBP1	99	82.138	Poecilia_mexicana
MGP_PahariEiJ_G0028318	Ncbp1	99	82.538	ENSPREG00000006035	NCBP1	99	82.161	Poecilia_reticulata
MGP_PahariEiJ_G0028318	Ncbp1	100	98.228	ENSPPYG00000019426	NCBP1	100	98.228	Pongo_abelii
MGP_PahariEiJ_G0028318	Ncbp1	90	89.153	ENSPCAG00000009943	NCBP1	90	89.153	Procavia_capensis
MGP_PahariEiJ_G0028318	Ncbp1	82	98.026	ENSPCOG00000020024	NCBP1	98	98.026	Propithecus_coquereli
MGP_PahariEiJ_G0028318	Ncbp1	100	97.722	ENSPVAG00000005924	NCBP1	100	97.722	Pteropus_vampyrus
MGP_PahariEiJ_G0028318	Ncbp1	91	83.101	ENSPNYG00000002140	NCBP1	99	82.961	Pundamilia_nyererei
MGP_PahariEiJ_G0028318	Ncbp1	99	81.910	ENSPNAG00000027753	NCBP1	99	81.281	Pygocentrus_nattereri
MGP_PahariEiJ_G0028318	Ncbp1	100	99.873	ENSRNOG00000023605	Ncbp1	100	99.873	Rattus_norvegicus
MGP_PahariEiJ_G0028318	Ncbp1	100	98.228	ENSRBIG00000043175	NCBP1	100	98.228	Rhinopithecus_bieti
MGP_PahariEiJ_G0028318	Ncbp1	100	98.228	ENSRROG00000029767	NCBP1	100	98.228	Rhinopithecus_roxellana
MGP_PahariEiJ_G0028318	Ncbp1	100	98.354	ENSSBOG00000019378	NCBP1	100	98.354	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0028318	Ncbp1	69	95.331	ENSSHAG00000015882	NCBP1	73	95.331	Sarcophilus_harrisii
MGP_PahariEiJ_G0028318	Ncbp1	99	80.485	ENSSFOG00015001872	NCBP1	100	80.127	Scleropages_formosus
MGP_PahariEiJ_G0028318	Ncbp1	99	81.234	ENSSMAG00000007463	NCBP1	99	80.982	Scophthalmus_maximus
MGP_PahariEiJ_G0028318	Ncbp1	99	83.016	ENSSDUG00000007019	NCBP1	100	82.442	Seriola_dumerili
MGP_PahariEiJ_G0028318	Ncbp1	99	82.746	ENSSLDG00000021924	NCBP1	99	82.368	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0028318	Ncbp1	85	89.520	ENSSARG00000007274	NCBP1	87	89.520	Sorex_araneus
MGP_PahariEiJ_G0028318	Ncbp1	100	81.646	ENSSPUG00000008609	NCBP1	100	81.646	Sphenodon_punctatus
MGP_PahariEiJ_G0028318	Ncbp1	99	83.249	ENSSPAG00000012550	NCBP1	99	82.872	Stegastes_partitus
MGP_PahariEiJ_G0028318	Ncbp1	100	98.101	ENSSSCG00000005366	NCBP1	100	98.101	Sus_scrofa
MGP_PahariEiJ_G0028318	Ncbp1	100	83.396	ENSTGUG00000001472	NCBP1	100	83.522	Taeniopygia_guttata
MGP_PahariEiJ_G0028318	Ncbp1	99	81.486	ENSTRUG00000005287	NCBP1	99	81.108	Takifugu_rubripes
MGP_PahariEiJ_G0028318	Ncbp1	100	94.810	ENSTBEG00000004035	NCBP1	100	94.810	Tupaia_belangeri
MGP_PahariEiJ_G0028318	Ncbp1	88	98.030	ENSTTRG00000000507	NCBP1	88	98.030	Tursiops_truncatus
MGP_PahariEiJ_G0028318	Ncbp1	100	98.228	ENSUAMG00000005471	NCBP1	100	98.228	Ursus_americanus
MGP_PahariEiJ_G0028318	Ncbp1	97	95.969	ENSUMAG00000011865	NCBP1	100	98.243	Ursus_maritimus
MGP_PahariEiJ_G0028318	Ncbp1	100	93.924	ENSVPAG00000010537	NCBP1	100	93.924	Vicugna_pacos
MGP_PahariEiJ_G0028318	Ncbp1	100	98.354	ENSVVUG00000019725	NCBP1	100	98.354	Vulpes_vulpes
MGP_PahariEiJ_G0028318	Ncbp1	100	80.657	ENSXETG00000010179	ncbp1	100	80.657	Xenopus_tropicalis
MGP_PahariEiJ_G0028318	Ncbp1	99	82.642	ENSXMAG00000018253	NCBP1	99	82.264	Xiphophorus_maculatus