EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0028447 (Gene tree)
Gene ID: 110323576
Gene Symbol: Rasef
Alias: RAB45
Full Name: RAS and EF hand domain containing
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 70960 bases
Position: chr6:26588259-26659218
Accession: 2448565
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0077844	MMR_HSR1	PF01926.23	6.3e-08	1	1
MGP_PahariEiJ_P0077845	MMR_HSR1	PF01926.23	1.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0077845	-	5166	-	MGP_PahariEiJ_P0077845	622 (aa)	-	-
MGP_PahariEiJ_T0077844	-	5143	-	MGP_PahariEiJ_P0077844	555 (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0028447's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0028447's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0028447	Rasef	100	83.662	ENSG00000165105	RASEF	82	83.003	Homo_sapiens
MGP_PahariEiJ_G0028447	Rasef	99	51.712	ENSAPOG00000024369	rasef	95	53.595	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0028447	Rasef	99	83.993	ENSAMEG00000009467	RASEF	82	84.202	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0028447	Rasef	94	52.256	ENSACIG00000005549	rasef	82	52.632	Amphilophus_citrinellus
MGP_PahariEiJ_G0028447	Rasef	92	54.286	ENSAOCG00000011464	rasef	78	54.352	Amphiprion_ocellaris
MGP_PahariEiJ_G0028447	Rasef	99	52.650	ENSAPEG00000003461	rasef	85	52.488	Amphiprion_percula
MGP_PahariEiJ_G0028447	Rasef	94	53.597	ENSATEG00000015032	rasef	86	53.554	Anabas_testudineus
MGP_PahariEiJ_G0028447	Rasef	99	72.987	ENSAPLG00000013969	RASEF	95	72.910	Anas_platyrhynchos
MGP_PahariEiJ_G0028447	Rasef	99	72.581	ENSACAG00000002155	RASEF	83	73.032	Anolis_carolinensis
MGP_PahariEiJ_G0028447	Rasef	100	84.740	ENSANAG00000035226	RASEF	81	84.899	Aotus_nancymaae
MGP_PahariEiJ_G0028447	Rasef	99	54.561	ENSACLG00000017818	rasef	85	54.677	Astatotilapia_calliptera
MGP_PahariEiJ_G0028447	Rasef	99	55.556	ENSAMXG00000011411	rasef	85	55.040	Astyanax_mexicanus
MGP_PahariEiJ_G0028447	Rasef	100	83.483	ENSBTAG00000021751	RASEF	82	82.838	Bos_taurus
MGP_PahariEiJ_G0028447	Rasef	100	84.229	ENSCJAG00000003547	RASEF	81	84.422	Callithrix_jacchus
MGP_PahariEiJ_G0028447	Rasef	99	83.633	ENSCAFG00000001453	RASEF	73	83.866	Canis_familiaris
MGP_PahariEiJ_G0028447	Rasef	99	83.813	ENSCAFG00020023859	RASEF	80	84.034	Canis_lupus_dingo
MGP_PahariEiJ_G0028447	Rasef	100	84.201	ENSCHIG00000020336	RASEF	98	83.007	Capra_hircus
MGP_PahariEiJ_G0028447	Rasef	93	83.846	ENSTSYG00000006987	RASEF	99	83.846	Carlito_syrichta
MGP_PahariEiJ_G0028447	Rasef	80	67.793	ENSCAPG00000010585	-	100	65.253	Cavia_aperea
MGP_PahariEiJ_G0028447	Rasef	100	76.079	ENSCPOG00000005004	RASEF	100	76.975	Cavia_porcellus
MGP_PahariEiJ_G0028447	Rasef	100	84.381	ENSCCAG00000031624	RASEF	81	84.228	Cebus_capucinus
MGP_PahariEiJ_G0028447	Rasef	99	47.378	ENSCLAG00000004622	-	99	47.378	Chinchilla_lanigera
MGP_PahariEiJ_G0028447	Rasef	100	83.483	ENSCSAG00000007663	RASEF	81	83.557	Chlorocebus_sabaeus
MGP_PahariEiJ_G0028447	Rasef	94	80.268	ENSCHOG00000001831	RASEF	93	79.501	Choloepus_hoffmanni
MGP_PahariEiJ_G0028447	Rasef	99	72.043	ENSCPBG00000019037	RASEF	98	71.289	Chrysemys_picta_bellii
MGP_PahariEiJ_G0028447	Rasef	100	82.765	ENSCANG00000034081	RASEF	81	82.886	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0028447	Rasef	100	92.266	ENSCGRG00001001324	Rasef	100	92.217	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0028447	Rasef	100	92.266	ENSCGRG00000006455	Rasef	100	92.266	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0028447	Rasef	89	49.320	ENSCSEG00000017898	rasef	81	47.700	Cynoglossus_semilaevis
MGP_PahariEiJ_G0028447	Rasef	99	54.419	ENSCVAG00000006168	rasef	75	54.153	Cyprinodon_variegatus
MGP_PahariEiJ_G0028447	Rasef	100	54.231	ENSDARG00000076250	rasef	87	53.239	Danio_rerio
MGP_PahariEiJ_G0028447	Rasef	100	83.303	ENSDNOG00000006002	RASEF	73	83.557	Dasypus_novemcinctus
MGP_PahariEiJ_G0028447	Rasef	98	84.124	ENSDORG00000015570	Rasef	100	84.095	Dipodomys_ordii
MGP_PahariEiJ_G0028447	Rasef	99	38.660	ENSEBUG00000012179	rasef	99	38.462	Eptatretus_burgeri
MGP_PahariEiJ_G0028447	Rasef	99	49.649	ENSEBUG00000012629	rasef	82	49.100	Eptatretus_burgeri
MGP_PahariEiJ_G0028447	Rasef	99	82.374	ENSEASG00005015967	RASEF	98	82.718	Equus_asinus_asinus
MGP_PahariEiJ_G0028447	Rasef	99	82.734	ENSECAG00000000324	RASEF	98	83.025	Equus_caballus
MGP_PahariEiJ_G0028447	Rasef	94	68.582	ENSEEUG00000008455	RASEF	100	69.875	Erinaceus_europaeus
MGP_PahariEiJ_G0028447	Rasef	99	82.914	ENSFCAG00000002416	RASEF	81	83.193	Felis_catus
MGP_PahariEiJ_G0028447	Rasef	99	74.014	ENSFALG00000003611	RASEF	99	73.869	Ficedula_albicollis
MGP_PahariEiJ_G0028447	Rasef	100	80.790	ENSFDAG00000013428	RASEF	100	81.208	Fukomys_damarensis
MGP_PahariEiJ_G0028447	Rasef	94	53.383	ENSFHEG00000022470	rasef	76	53.684	Fundulus_heteroclitus
MGP_PahariEiJ_G0028447	Rasef	94	51.923	ENSGMOG00000010090	rasef	82	54.336	Gadus_morhua
MGP_PahariEiJ_G0028447	Rasef	99	72.760	ENSGALG00000012576	RASEF	83	73.032	Gallus_gallus
MGP_PahariEiJ_G0028447	Rasef	99	53.333	ENSGAFG00000013735	rasef	83	53.618	Gambusia_affinis
MGP_PahariEiJ_G0028447	Rasef	99	55.654	ENSGACG00000007528	rasef	85	55.629	Gasterosteus_aculeatus
MGP_PahariEiJ_G0028447	Rasef	99	72.531	ENSGAGG00000007338	RASEF	99	71.617	Gopherus_agassizii
MGP_PahariEiJ_G0028447	Rasef	100	83.483	ENSGGOG00000006651	RASEF	82	82.838	Gorilla_gorilla
MGP_PahariEiJ_G0028447	Rasef	99	54.389	ENSHBUG00000010345	rasef	74	54.516	Haplochromis_burtoni
MGP_PahariEiJ_G0028447	Rasef	100	81.508	ENSHGLG00000000399	RASEF	82	81.711	Heterocephalus_glaber_female
MGP_PahariEiJ_G0028447	Rasef	100	81.508	ENSHGLG00100008043	RASEF	100	81.711	Heterocephalus_glaber_male
MGP_PahariEiJ_G0028447	Rasef	99	48.925	ENSHCOG00000010976	rasef	82	49.158	Hippocampus_comes
MGP_PahariEiJ_G0028447	Rasef	99	53.578	ENSIPUG00000008768	rasef	82	54.187	Ictalurus_punctatus
MGP_PahariEiJ_G0028447	Rasef	100	84.201	ENSSTOG00000004311	RASEF	80	84.060	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0028447	Rasef	100	82.469	ENSJJAG00000023215	Rasef	100	82.609	Jaculus_jaculus
MGP_PahariEiJ_G0028447	Rasef	99	52.101	ENSKMAG00000021106	rasef	75	52.516	Kryptolebias_marmoratus
MGP_PahariEiJ_G0028447	Rasef	99	49.558	ENSLBEG00000021098	-	83	50.912	Labrus_bergylta
MGP_PahariEiJ_G0028447	Rasef	99	67.500	ENSLACG00000010849	RASEF	86	66.885	Latimeria_chalumnae
MGP_PahariEiJ_G0028447	Rasef	99	65.827	ENSLOCG00000002094	rasef	89	63.565	Lepisosteus_oculatus
MGP_PahariEiJ_G0028447	Rasef	100	82.374	ENSLAFG00000010552	RASEF	99	82.521	Loxodonta_africana
MGP_PahariEiJ_G0028447	Rasef	100	83.124	ENSMFAG00000046414	RASEF	81	83.221	Macaca_fascicularis
MGP_PahariEiJ_G0028447	Rasef	100	83.303	ENSMNEG00000044341	RASEF	80	83.389	Macaca_nemestrina
MGP_PahariEiJ_G0028447	Rasef	100	82.944	ENSMLEG00000034579	RASEF	81	83.054	Mandrillus_leucophaeus
MGP_PahariEiJ_G0028447	Rasef	82	53.653	ENSMAMG00000001536	rasef	82	53.598	Mastacembelus_armatus
MGP_PahariEiJ_G0028447	Rasef	94	51.316	ENSMZEG00005004819	rasef	82	51.664	Maylandia_zebra
MGP_PahariEiJ_G0028447	Rasef	100	93.525	ENSMAUG00000010820	Rasef	100	93.445	Mesocricetus_auratus
MGP_PahariEiJ_G0028447	Rasef	100	83.513	ENSMICG00000011836	RASEF	81	83.752	Microcebus_murinus
MGP_PahariEiJ_G0028447	Rasef	100	92.986	ENSMOCG00000000943	Rasef	100	92.986	Microtus_ochrogaster
MGP_PahariEiJ_G0028447	Rasef	97	49.912	ENSMMOG00000000102	rasef	83	51.429	Mola_mola
MGP_PahariEiJ_G0028447	Rasef	100	77.419	ENSMODG00000009037	RASEF	81	77.889	Monodelphis_domestica
MGP_PahariEiJ_G0028447	Rasef	99	54.291	ENSMALG00000009830	rasef	85	54.516	Monopterus_albus
MGP_PahariEiJ_G0028447	Rasef	100	97.477	MGP_CAROLIEiJ_G0026109	Rasef	100	97.477	Mus_caroli
MGP_PahariEiJ_G0028447	Rasef	100	97.297	ENSMUSG00000043003	Rasef	100	97.297	Mus_musculus
MGP_PahariEiJ_G0028447	Rasef	100	96.757	MGP_SPRETEiJ_G0027075	Rasef	100	96.757	Mus_spretus
MGP_PahariEiJ_G0028447	Rasef	99	80.866	ENSMPUG00000013070	RASEF	99	80.866	Mustela_putorius_furo
MGP_PahariEiJ_G0028447	Rasef	100	80.755	ENSMLUG00000013108	RASEF	80	81.176	Myotis_lucifugus
MGP_PahariEiJ_G0028447	Rasef	100	86.176	ENSNGAG00000014878	Rasef	100	86.176	Nannospalax_galili
MGP_PahariEiJ_G0028447	Rasef	94	50.652	ENSNBRG00000012335	rasef	82	51.042	Neolamprologus_brichardi
MGP_PahariEiJ_G0028447	Rasef	100	83.303	ENSNLEG00000003245	RASEF	82	82.673	Nomascus_leucogenys
MGP_PahariEiJ_G0028447	Rasef	100	74.552	ENSMEUG00000016412	RASEF	81	74.539	Notamacropus_eugenii
MGP_PahariEiJ_G0028447	Rasef	100	66.966	ENSOPRG00000002742	-	81	68.121	Ochotona_princeps
MGP_PahariEiJ_G0028447	Rasef	50	63.082	ENSODEG00000002594	-	99	63.082	Octodon_degus
MGP_PahariEiJ_G0028447	Rasef	99	54.325	ENSONIG00000015021	rasef	81	56.574	Oreochromis_niloticus
MGP_PahariEiJ_G0028447	Rasef	100	71.629	ENSOANG00000010379	RASEF	83	71.246	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0028447	Rasef	100	81.688	ENSOCUG00000001548	RASEF	82	80.858	Oryctolagus_cuniculus
MGP_PahariEiJ_G0028447	Rasef	99	53.993	ENSORLG00000005076	rasef	73	54.072	Oryzias_latipes
MGP_PahariEiJ_G0028447	Rasef	99	53.368	ENSORLG00020020049	rasef	73	53.485	Oryzias_latipes_hni
MGP_PahariEiJ_G0028447	Rasef	99	53.819	ENSORLG00015008479	rasef	73	53.583	Oryzias_latipes_hsok
MGP_PahariEiJ_G0028447	Rasef	99	53.472	ENSOMEG00000023457	rasef	84	54.983	Oryzias_melastigma
MGP_PahariEiJ_G0028447	Rasef	99	84.532	ENSOGAG00000012724	RASEF	99	84.706	Otolemur_garnettii
MGP_PahariEiJ_G0028447	Rasef	100	83.483	ENSOARG00000009073	RASEF	77	82.838	Ovis_aries
MGP_PahariEiJ_G0028447	Rasef	100	83.842	ENSPPAG00000042152	RASEF	85	83.003	Pan_paniscus
MGP_PahariEiJ_G0028447	Rasef	99	82.914	ENSPPRG00000008487	RASEF	80	83.193	Panthera_pardus
MGP_PahariEiJ_G0028447	Rasef	99	83.273	ENSPTIG00000006676	RASEF	98	81.025	Panthera_tigris_altaica
MGP_PahariEiJ_G0028447	Rasef	100	83.662	ENSPTRG00000021052	RASEF	85	82.838	Pan_troglodytes
MGP_PahariEiJ_G0028447	Rasef	100	82.944	ENSPANG00000024899	RASEF	81	83.054	Papio_anubis
MGP_PahariEiJ_G0028447	Rasef	99	70.430	ENSPSIG00000017699	RASEF	99	69.169	Pelodiscus_sinensis
MGP_PahariEiJ_G0028447	Rasef	99	45.070	ENSPMGG00000015499	rasef	90	83.019	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0028447	Rasef	100	93.165	ENSPEMG00000002797	Rasef	100	93.165	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0028447	Rasef	94	48.182	ENSPMAG00000001634	rasef	80	47.716	Petromyzon_marinus
MGP_PahariEiJ_G0028447	Rasef	100	78.136	ENSPCIG00000027655	RASEF	81	78.057	Phascolarctos_cinereus
MGP_PahariEiJ_G0028447	Rasef	99	53.427	ENSPFOG00000018924	rasef	82	53.607	Poecilia_formosa
MGP_PahariEiJ_G0028447	Rasef	99	51.510	ENSPLAG00000022907	RASEF	97	51.920	Poecilia_latipinna
MGP_PahariEiJ_G0028447	Rasef	99	53.509	ENSPMEG00000006546	rasef	85	53.783	Poecilia_mexicana
MGP_PahariEiJ_G0028447	Rasef	99	53.333	ENSPREG00000018728	rasef	73	53.618	Poecilia_reticulata
MGP_PahariEiJ_G0028447	Rasef	100	83.662	ENSPPYG00000019320	RASEF	82	83.003	Pongo_abelii
MGP_PahariEiJ_G0028447	Rasef	100	83.692	ENSPCOG00000022979	RASEF	81	84.087	Propithecus_coquereli
MGP_PahariEiJ_G0028447	Rasef	100	82.047	ENSPVAG00000003682	RASEF	81	82.383	Pteropus_vampyrus
MGP_PahariEiJ_G0028447	Rasef	94	52.495	ENSPNYG00000010579	rasef	80	52.129	Pundamilia_nyererei
MGP_PahariEiJ_G0028447	Rasef	99	53.287	ENSPNAG00000016447	rasef	87	53.302	Pygocentrus_nattereri
MGP_PahariEiJ_G0028447	Rasef	100	89.928	ENSRNOG00000024190	Rasef	84	90.084	Rattus_norvegicus
MGP_PahariEiJ_G0028447	Rasef	100	83.303	ENSRBIG00000039516	RASEF	81	83.389	Rhinopithecus_bieti
MGP_PahariEiJ_G0028447	Rasef	94	83.748	ENSRROG00000044397	RASEF	80	83.808	Rhinopithecus_roxellana
MGP_PahariEiJ_G0028447	Rasef	100	84.381	ENSSBOG00000029298	RASEF	81	84.564	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0028447	Rasef	100	65.653	ENSSFOG00015009014	rasef	86	64.065	Scleropages_formosus
MGP_PahariEiJ_G0028447	Rasef	99	50.168	ENSSMAG00000000942	rasef	88	50.153	Scophthalmus_maximus
MGP_PahariEiJ_G0028447	Rasef	82	50.000	ENSSDUG00000022228	rasef	73	55.375	Seriola_dumerili
MGP_PahariEiJ_G0028447	Rasef	99	50.170	ENSSLDG00000001784	rasef	68	50.631	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0028447	Rasef	99	68.280	ENSSPUG00000002899	RASEF	84	69.514	Sphenodon_punctatus
MGP_PahariEiJ_G0028447	Rasef	99	52.349	ENSSPAG00000002442	rasef	74	52.839	Stegastes_partitus
MGP_PahariEiJ_G0028447	Rasef	100	83.483	ENSSSCG00000040707	-	90	83.725	Sus_scrofa
MGP_PahariEiJ_G0028447	Rasef	99	74.014	ENSTGUG00000003216	RASEF	84	73.147	Taeniopygia_guttata
MGP_PahariEiJ_G0028447	Rasef	99	52.931	ENSTRUG00000011541	rasef	85	52.751	Takifugu_rubripes
MGP_PahariEiJ_G0028447	Rasef	99	53.940	ENSTNIG00000006010	rasef	81	53.695	Tetraodon_nigroviridis
MGP_PahariEiJ_G0028447	Rasef	100	73.656	ENSTTRG00000002061	RASEF	82	73.806	Tursiops_truncatus
MGP_PahariEiJ_G0028447	Rasef	99	83.993	ENSUAMG00000021591	RASEF	99	82.114	Ursus_americanus
MGP_PahariEiJ_G0028447	Rasef	99	84.173	ENSUMAG00000004670	RASEF	99	80.892	Ursus_maritimus
MGP_PahariEiJ_G0028447	Rasef	99	83.273	ENSVVUG00000029736	RASEF	98	83.028	Vulpes_vulpes
MGP_PahariEiJ_G0028447	Rasef	99	70.053	ENSXETG00000016758	mgc147600	83	70.333	Xenopus_tropicalis
MGP_PahariEiJ_G0028447	Rasef	100	47.972	ENSXCOG00000005178	rasef	87	48.339	Xiphophorus_couchianus
MGP_PahariEiJ_G0028447	Rasef	99	52.807	ENSXMAG00000015129	rasef	85	53.125	Xiphophorus_maculatus