EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0028522 (Gene tree)
Gene ID: -
Gene Symbol: L1td1
Alias: ECAT11
Full Name: LINE-1 type transposase domain containing 1
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 12495 bases
Position: chr6:49796908-49809402
Accession: 3578435
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0078190	Transposase_22	PF02994.14	5.1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0078190	-	3039	-	MGP_PahariEiJ_P0078190	816 (aa)	-	-
MGP_PahariEiJ_T0078191	-	466	-	MGP_PahariEiJ_P0078191	120 (aa)	-	-
MGP_PahariEiJ_T0078189	-	741	-	MGP_PahariEiJ_P0078189	153 (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0028522's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0028522's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0028522	L1td1	54	52.394	ENSG00000240563	L1TD1	60	49.531	Homo_sapiens
MGP_PahariEiJ_G0028522	L1td1	99	43.707	ENSAMEG00000014821	L1TD1	50	51.724	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0028522	L1td1	75	55.882	ENSCJAG00000038509	L1TD1	92	55.882	Callithrix_jacchus
MGP_PahariEiJ_G0028522	L1td1	99	42.629	ENSCATG00000038295	L1TD1	54	52.419	Cercocebus_atys
MGP_PahariEiJ_G0028522	L1td1	75	54.225	ENSCLAG00000005428	-	78	48.424	Chinchilla_lanigera
MGP_PahariEiJ_G0028522	L1td1	99	65.983	ENSCGRG00001024238	L1td1	53	74.764	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0028522	L1td1	99	65.983	ENSCGRG00000011853	L1td1	53	74.764	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0028522	L1td1	99	37.805	ENSDNOG00000040097	-	85	46.199	Dasypus_novemcinctus
MGP_PahariEiJ_G0028522	L1td1	99	40.559	ENSDNOG00000039645	-	84	49.593	Dasypus_novemcinctus
MGP_PahariEiJ_G0028522	L1td1	99	41.958	ENSECAG00000013248	L1TD1	53	48.478	Equus_caballus
MGP_PahariEiJ_G0028522	L1td1	52	41.509	ENSECAG00000035069	-	94	41.509	Equus_caballus
MGP_PahariEiJ_G0028522	L1td1	50	48.843	ENSFCAG00000042658	L1TD1	51	49.655	Felis_catus
MGP_PahariEiJ_G0028522	L1td1	50	30.894	ENSFDAG00000000664	-	89	30.894	Fukomys_damarensis
MGP_PahariEiJ_G0028522	L1td1	54	51.596	ENSGGOG00000026365	L1TD1	61	48.826	Gorilla_gorilla
MGP_PahariEiJ_G0028522	L1td1	50	33.000	ENSHGLG00100019863	-	82	33.000	Heterocephalus_glaber_male
MGP_PahariEiJ_G0028522	L1td1	99	41.600	ENSMFAG00000031887	L1TD1	54	52.151	Macaca_fascicularis
MGP_PahariEiJ_G0028522	L1td1	60	77.910	ENSMAUG00000020769	L1td1	50	79.795	Mesocricetus_auratus
MGP_PahariEiJ_G0028522	L1td1	99	44.054	ENSMICG00000045847	L1TD1	51	50.685	Microcebus_murinus
MGP_PahariEiJ_G0028522	L1td1	60	77.381	ENSMOCG00000007037	L1td1	55	75.355	Microtus_ochrogaster
MGP_PahariEiJ_G0028522	L1td1	51	87.736	ENSMUSG00000087166	L1td1	50	88.832	Mus_musculus
MGP_PahariEiJ_G0028522	L1td1	51	87.736	MGP_SPRETEiJ_G0027153	L1td1	51	88.832	Mus_spretus
MGP_PahariEiJ_G0028522	L1td1	100	49.100	ENSNGAG00000000776	L1td1	69	61.305	Nannospalax_galili
MGP_PahariEiJ_G0028522	L1td1	54	51.862	ENSPPAG00000043606	L1TD1	64	49.061	Pan_paniscus
MGP_PahariEiJ_G0028522	L1td1	60	48.843	ENSPPRG00000011113	L1TD1	50	50.115	Panthera_pardus
MGP_PahariEiJ_G0028522	L1td1	54	51.862	ENSPTRG00000034387	L1TD1	64	49.061	Pan_troglodytes
MGP_PahariEiJ_G0028522	L1td1	99	41.553	ENSPANG00000021627	L1TD1	65	52.151	Papio_anubis
MGP_PahariEiJ_G0028522	L1td1	99	66.746	ENSPEMG00000008068	L1td1	97	76.309	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0028522	L1td1	99	41.648	ENSPPYG00000001286	L1TD1	98	49.541	Pongo_abelii
MGP_PahariEiJ_G0028522	L1td1	58	51.288	ENSPCOG00000005879	L1TD1	50	51.598	Propithecus_coquereli
MGP_PahariEiJ_G0028522	L1td1	53	31.921	ENSRNOG00000049650	AABR07018556.1	95	31.921	Rattus_norvegicus
MGP_PahariEiJ_G0028522	L1td1	52	32.945	ENSRNOG00000048921	AABR07053613.1	95	32.945	Rattus_norvegicus
MGP_PahariEiJ_G0028522	L1td1	53	32.945	ENSRNOG00000052690	AABR07042361.1	95	32.945	Rattus_norvegicus
MGP_PahariEiJ_G0028522	L1td1	52	32.945	ENSRNOG00000048904	AABR07004232.1	95	32.945	Rattus_norvegicus
MGP_PahariEiJ_G0028522	L1td1	53	32.362	ENSRNOG00000045597	AABR07018132.1	95	32.362	Rattus_norvegicus
MGP_PahariEiJ_G0028522	L1td1	100	71.890	ENSRNOG00000050670	AABR07049326.1	58	80.463	Rattus_norvegicus
MGP_PahariEiJ_G0028522	L1td1	53	31.356	ENSRNOG00000052559	AABR07037395.2	95	31.356	Rattus_norvegicus
MGP_PahariEiJ_G0028522	L1td1	75	55.160	ENSTBEG00000015274	L1TD1	82	55.160	Tupaia_belangeri
MGP_PahariEiJ_G0028522	L1td1	99	44.380	ENSUAMG00000002306	L1TD1	51	53.846	Ursus_americanus
MGP_PahariEiJ_G0028522	L1td1	85	55.496	ENSUMAG00000014924	L1TD1	94	55.263	Ursus_maritimus