EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0028539 (Gene tree)
Gene ID: 110323092
Gene Symbol: Raver2
Alias: A430091O22Rik
Full Name: ribonucleoprotein%2C PTB binding 2
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 79933 bases
Position: chr6:52053740-52133672
Accession: 110323092
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0078254	RRM_1	PF00076.22	5.2e-30	1	3
MGP_PahariEiJ_P0078254	RRM_1	PF00076.22	5.2e-30	2	3
MGP_PahariEiJ_P0078254	RRM_1	PF00076.22	5.2e-30	3	3
MGP_PahariEiJ_P0078253	RRM_1	PF00076.22	2.4e-29	1	3
MGP_PahariEiJ_P0078253	RRM_1	PF00076.22	2.4e-29	2	3
MGP_PahariEiJ_P0078253	RRM_1	PF00076.22	2.4e-29	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0078254	-	2883	-	MGP_PahariEiJ_P0078254	458 (aa)	-	-
MGP_PahariEiJ_T0078253	-	4033	XM_021200164	MGP_PahariEiJ_P0078253	673 (aa)	XP_021055823	UPI000A312C8F

Gene Model

Click here to download MGP_PahariEiJ_G0028539's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0028539's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0028539	Raver2	64	58.503	MGP_PahariEiJ_G0014726	-	66	44.982
MGP_PahariEiJ_G0028539	Raver2	50	31.169	MGP_PahariEiJ_G0028622	Elavl4	67	35.870

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0028539	Raver2	96	83.447	ENSG00000162437	RAVER2	93	81.705	Homo_sapiens
MGP_PahariEiJ_G0028539	Raver2	89	57.317	ENSAPOG00000002766	raver2	69	47.961	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0028539	Raver2	93	81.558	ENSAMEG00000015178	RAVER2	100	81.558	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0028539	Raver2	50	64.224	ENSACIG00000012229	-	79	64.224	Amphilophus_citrinellus
MGP_PahariEiJ_G0028539	Raver2	51	60.944	ENSAOCG00000010129	-	81	61.472	Amphiprion_ocellaris
MGP_PahariEiJ_G0028539	Raver2	51	60.944	ENSAPEG00000010843	-	81	61.472	Amphiprion_percula
MGP_PahariEiJ_G0028539	Raver2	92	55.687	ENSATEG00000019679	raver2	81	63.519	Anabas_testudineus
MGP_PahariEiJ_G0028539	Raver2	84	68.542	ENSAPLG00000013160	RAVER2	100	62.927	Anas_platyrhynchos
MGP_PahariEiJ_G0028539	Raver2	94	68.889	ENSACAG00000008443	RAVER2	88	68.889	Anolis_carolinensis
MGP_PahariEiJ_G0028539	Raver2	92	84.706	ENSANAG00000025857	RAVER2	94	80.775	Aotus_nancymaae
MGP_PahariEiJ_G0028539	Raver2	92	56.265	ENSACLG00000001840	raver2	76	42.532	Astatotilapia_calliptera
MGP_PahariEiJ_G0028539	Raver2	92	57.210	ENSAMXG00000010570	raver2	66	50.433	Astyanax_mexicanus
MGP_PahariEiJ_G0028539	Raver2	92	85.142	ENSBTAG00000030686	RAVER2	94	81.085	Bos_taurus
MGP_PahariEiJ_G0028539	Raver2	95	80.638	ENSCJAG00000016724	RAVER2	95	77.390	Callithrix_jacchus
MGP_PahariEiJ_G0028539	Raver2	84	79.718	ENSCAFG00000018617	RAVER2	99	79.718	Canis_familiaris
MGP_PahariEiJ_G0028539	Raver2	96	82.916	ENSCAFG00020018120	RAVER2	94	79.818	Canis_lupus_dingo
MGP_PahariEiJ_G0028539	Raver2	92	84.670	ENSCHIG00000005514	RAVER2	94	80.745	Capra_hircus
MGP_PahariEiJ_G0028539	Raver2	89	80.231	ENSTSYG00000006019	RAVER2	88	80.231	Carlito_syrichta
MGP_PahariEiJ_G0028539	Raver2	84	64.508	ENSCAPG00000013527	RAVER2	99	63.472	Cavia_aperea
MGP_PahariEiJ_G0028539	Raver2	89	67.561	ENSCPOG00000005986	RAVER2	99	60.498	Cavia_porcellus
MGP_PahariEiJ_G0028539	Raver2	95	81.591	ENSCCAG00000029834	RAVER2	95	78.788	Cebus_capucinus
MGP_PahariEiJ_G0028539	Raver2	95	81.321	ENSCATG00000040658	RAVER2	100	79.452	Cercocebus_atys
MGP_PahariEiJ_G0028539	Raver2	89	62.810	ENSCLAG00000006590	RAVER2	100	62.810	Chinchilla_lanigera
MGP_PahariEiJ_G0028539	Raver2	93	79.715	ENSCSAG00000001350	RAVER2	100	79.715	Chlorocebus_sabaeus
MGP_PahariEiJ_G0028539	Raver2	95	79.493	ENSCHOG00000007668	RAVER2	93	77.950	Choloepus_hoffmanni
MGP_PahariEiJ_G0028539	Raver2	98	67.920	ENSCPBG00000001015	RAVER2	88	66.667	Chrysemys_picta_bellii
MGP_PahariEiJ_G0028539	Raver2	92	82.824	ENSCANG00000042311	RAVER2	99	79.225	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0028539	Raver2	96	92.517	ENSCGRG00001011852	Raver2	97	91.424	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0028539	Raver2	68	94.569	ENSCGRG00000011814	-	100	94.569	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0028539	Raver2	78	60.224	ENSCSEG00000017839	raver2	82	65.484	Cynoglossus_semilaevis
MGP_PahariEiJ_G0028539	Raver2	84	58.073	ENSCVAG00000002687	raver2	89	56.456	Cyprinodon_variegatus
MGP_PahariEiJ_G0028539	Raver2	87	59.296	ENSDARG00000075034	raver2	65	50.174	Danio_rerio
MGP_PahariEiJ_G0028539	Raver2	92	86.321	ENSDNOG00000012130	RAVER2	94	81.522	Dasypus_novemcinctus
MGP_PahariEiJ_G0028539	Raver2	92	81.797	ENSDORG00000002498	Raver2	89	77.882	Dipodomys_ordii
MGP_PahariEiJ_G0028539	Raver2	96	62.642	ENSETEG00000000706	RAVER2	97	62.029	Echinops_telfairi
MGP_PahariEiJ_G0028539	Raver2	89	83.415	ENSEASG00005008158	RAVER2	100	77.302	Equus_asinus_asinus
MGP_PahariEiJ_G0028539	Raver2	89	83.415	ENSECAG00000022014	RAVER2	100	77.619	Equus_caballus
MGP_PahariEiJ_G0028539	Raver2	93	48.292	ENSELUG00000022384	raver2	85	67.421	Esox_lucius
MGP_PahariEiJ_G0028539	Raver2	94	83.372	ENSFCAG00000022781	RAVER2	96	80.121	Felis_catus
MGP_PahariEiJ_G0028539	Raver2	84	67.442	ENSFALG00000012634	RAVER2	100	57.190	Ficedula_albicollis
MGP_PahariEiJ_G0028539	Raver2	89	66.585	ENSFDAG00000010721	RAVER2	100	60.794	Fukomys_damarensis
MGP_PahariEiJ_G0028539	Raver2	93	57.042	ENSFHEG00000001322	raver2	71	48.113	Fundulus_heteroclitus
MGP_PahariEiJ_G0028539	Raver2	69	65.368	ENSGMOG00000013535	raver2	76	65.368	Gadus_morhua
MGP_PahariEiJ_G0028539	Raver2	91	70.714	ENSGALG00000033759	RAVER2	86	61.435	Gallus_gallus
MGP_PahariEiJ_G0028539	Raver2	91	56.938	ENSGAFG00000008577	raver2	70	48.331	Gambusia_affinis
MGP_PahariEiJ_G0028539	Raver2	93	56.206	ENSGACG00000007122	raver2	97	49.244	Gasterosteus_aculeatus
MGP_PahariEiJ_G0028539	Raver2	90	70.146	ENSGAGG00000018767	RAVER2	99	55.158	Gopherus_agassizii
MGP_PahariEiJ_G0028539	Raver2	96	80.000	ENSGGOG00000016447	RAVER2	98	79.037	Gorilla_gorilla
MGP_PahariEiJ_G0028539	Raver2	92	56.265	ENSHBUG00000022983	raver2	73	44.843	Haplochromis_burtoni
MGP_PahariEiJ_G0028539	Raver2	91	67.696	ENSHGLG00000018409	RAVER2	97	62.888	Heterocephalus_glaber_female
MGP_PahariEiJ_G0028539	Raver2	89	62.625	ENSHGLG00100006640	RAVER2	99	66.841	Heterocephalus_glaber_male
MGP_PahariEiJ_G0028539	Raver2	87	56.642	ENSHCOG00000005933	raver2	71	45.151	Hippocampus_comes
MGP_PahariEiJ_G0028539	Raver2	92	57.042	ENSIPUG00000007082	raver2	87	47.368	Ictalurus_punctatus
MGP_PahariEiJ_G0028539	Raver2	92	75.887	ENSSTOG00000009844	RAVER2	99	75.887	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0028539	Raver2	92	84.670	ENSJJAG00000000374	Raver2	98	80.938	Jaculus_jaculus
MGP_PahariEiJ_G0028539	Raver2	57	51.341	ENSKMAG00000011656	raver2	71	67.727	Kryptolebias_marmoratus
MGP_PahariEiJ_G0028539	Raver2	70	62.928	ENSLBEG00000003778	raver2	84	63.722	Labrus_bergylta
MGP_PahariEiJ_G0028539	Raver2	81	59.893	ENSLACG00000005188	RAVER2	75	49.126	Latimeria_chalumnae
MGP_PahariEiJ_G0028539	Raver2	90	59.854	ENSLOCG00000006773	raver2	72	49.839	Lepisosteus_oculatus
MGP_PahariEiJ_G0028539	Raver2	89	82.450	ENSLAFG00000012508	RAVER2	100	82.450	Loxodonta_africana
MGP_PahariEiJ_G0028539	Raver2	91	84.762	ENSMFAG00000031436	RAVER2	93	80.930	Macaca_fascicularis
MGP_PahariEiJ_G0028539	Raver2	91	84.524	ENSMMUG00000018565	RAVER2	100	79.110	Macaca_mulatta
MGP_PahariEiJ_G0028539	Raver2	91	84.762	ENSMNEG00000033127	RAVER2	100	79.281	Macaca_nemestrina
MGP_PahariEiJ_G0028539	Raver2	89	79.276	ENSMLEG00000036310	RAVER2	100	79.276	Mandrillus_leucophaeus
MGP_PahariEiJ_G0028539	Raver2	88	56.716	ENSMAMG00000009059	raver2	86	56.468	Mastacembelus_armatus
MGP_PahariEiJ_G0028539	Raver2	92	56.265	ENSMZEG00005014386	raver2	73	44.843	Maylandia_zebra
MGP_PahariEiJ_G0028539	Raver2	84	70.361	ENSMGAG00000011806	RAVER2	100	62.704	Meleagris_gallopavo
MGP_PahariEiJ_G0028539	Raver2	96	92.517	ENSMAUG00000004248	Raver2	97	90.505	Mesocricetus_auratus
MGP_PahariEiJ_G0028539	Raver2	92	85.849	ENSMICG00000029259	RAVER2	100	78.757	Microcebus_murinus
MGP_PahariEiJ_G0028539	Raver2	96	92.744	ENSMOCG00000018087	Raver2	97	90.549	Microtus_ochrogaster
MGP_PahariEiJ_G0028539	Raver2	95	71.396	ENSMODG00000001242	RAVER2	93	66.112	Monodelphis_domestica
MGP_PahariEiJ_G0028539	Raver2	93	54.897	ENSMALG00000018093	raver2	71	45.412	Monopterus_albus
MGP_PahariEiJ_G0028539	Raver2	100	98.253	MGP_CAROLIEiJ_G0026202	Raver2	100	97.771	Mus_caroli
MGP_PahariEiJ_G0028539	Raver2	100	98.253	ENSMUSG00000035275	Raver2	100	97.920	Mus_musculus
MGP_PahariEiJ_G0028539	Raver2	100	97.817	MGP_SPRETEiJ_G0027171	Raver2	100	97.771	Mus_spretus
MGP_PahariEiJ_G0028539	Raver2	93	80.476	ENSMPUG00000000717	RAVER2	100	80.476	Mustela_putorius_furo
MGP_PahariEiJ_G0028539	Raver2	84	82.946	ENSMLUG00000007699	RAVER2	99	79.785	Myotis_lucifugus
MGP_PahariEiJ_G0028539	Raver2	100	86.900	ENSNGAG00000000905	Raver2	97	84.049	Nannospalax_galili
MGP_PahariEiJ_G0028539	Raver2	52	62.656	ENSNBRG00000014345	-	82	62.397	Neolamprologus_brichardi
MGP_PahariEiJ_G0028539	Raver2	91	79.092	ENSNLEG00000015145	RAVER2	100	79.092	Nomascus_leucogenys
MGP_PahariEiJ_G0028539	Raver2	71	80.220	ENSMEUG00000012740	RAVER2	73	77.586	Notamacropus_eugenii
MGP_PahariEiJ_G0028539	Raver2	69	77.966	ENSOPRG00000016988	-	56	82.883	Ochotona_princeps
MGP_PahariEiJ_G0028539	Raver2	93	63.752	ENSODEG00000005253	RAVER2	100	63.752	Octodon_degus
MGP_PahariEiJ_G0028539	Raver2	71	58.025	ENSONIG00000008808	raver2	74	46.275	Oreochromis_niloticus
MGP_PahariEiJ_G0028539	Raver2	84	71.208	ENSOANG00000008327	-	100	63.295	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0028539	Raver2	92	78.538	ENSOCUG00000006221	RAVER2	93	73.333	Oryctolagus_cuniculus
MGP_PahariEiJ_G0028539	Raver2	91	57.757	ENSORLG00000010073	raver2	74	46.353	Oryzias_latipes
MGP_PahariEiJ_G0028539	Raver2	93	56.876	ENSORLG00020010822	raver2	72	45.706	Oryzias_latipes_hni
MGP_PahariEiJ_G0028539	Raver2	71	63.720	ENSORLG00015000191	raver2	86	63.063	Oryzias_latipes_hsok
MGP_PahariEiJ_G0028539	Raver2	93	56.177	ENSOMEG00000007789	raver2	72	46.189	Oryzias_melastigma
MGP_PahariEiJ_G0028539	Raver2	84	81.186	ENSOGAG00000011157	RAVER2	100	75.862	Otolemur_garnettii
MGP_PahariEiJ_G0028539	Raver2	92	84.434	ENSOARG00000010030	RAVER2	94	80.590	Ovis_aries
MGP_PahariEiJ_G0028539	Raver2	97	82.774	ENSPPAG00000039189	RAVER2	99	80.728	Pan_paniscus
MGP_PahariEiJ_G0028539	Raver2	94	83.372	ENSPPRG00000023350	RAVER2	96	80.121	Panthera_pardus
MGP_PahariEiJ_G0028539	Raver2	89	80.725	ENSPTIG00000009389	RAVER2	88	80.725	Panthera_tigris_altaica
MGP_PahariEiJ_G0028539	Raver2	96	80.952	ENSPTRG00000000824	RAVER2	93	79.899	Pan_troglodytes
MGP_PahariEiJ_G0028539	Raver2	91	83.178	ENSPANG00000003396	RAVER2	95	79.010	Papio_anubis
MGP_PahariEiJ_G0028539	Raver2	69	57.460	ENSPKIG00000013925	raver2	78	51.958	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0028539	Raver2	78	60.563	ENSPKIG00000019357	raver2	68	47.579	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0028539	Raver2	75	66.667	ENSPSIG00000010074	RAVER2	91	49.920	Pelodiscus_sinensis
MGP_PahariEiJ_G0028539	Raver2	89	48.655	ENSPMGG00000017781	raver2	85	48.411	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0028539	Raver2	96	93.891	ENSPEMG00000001332	Raver2	97	90.061	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0028539	Raver2	91	74.641	ENSPCIG00000020336	RAVER2	94	68.134	Phascolarctos_cinereus
MGP_PahariEiJ_G0028539	Raver2	91	56.699	ENSPFOG00000009386	raver2	67	47.826	Poecilia_formosa
MGP_PahariEiJ_G0028539	Raver2	91	56.699	ENSPLAG00000005632	raver2	70	47.402	Poecilia_latipinna
MGP_PahariEiJ_G0028539	Raver2	91	56.938	ENSPMEG00000000509	raver2	68	48.065	Poecilia_mexicana
MGP_PahariEiJ_G0028539	Raver2	91	56.699	ENSPREG00000020514	raver2	68	48.539	Poecilia_reticulata
MGP_PahariEiJ_G0028539	Raver2	74	88.166	ENSPPYG00000001271	-	92	88.393	Pongo_abelii
MGP_PahariEiJ_G0028539	Raver2	70	82.443	ENSPCAG00000000017	RAVER2	66	82.443	Procavia_capensis
MGP_PahariEiJ_G0028539	Raver2	97	81.432	ENSPCOG00000028379	RAVER2	93	80.155	Propithecus_coquereli
MGP_PahariEiJ_G0028539	Raver2	89	80.560	ENSPVAG00000007172	RAVER2	100	80.560	Pteropus_vampyrus
MGP_PahariEiJ_G0028539	Raver2	55	60.000	ENSPNYG00000013943	-	86	60.236	Pundamilia_nyererei
MGP_PahariEiJ_G0028539	Raver2	53	62.016	ENSPNAG00000000962	raver2	83	62.016	Pygocentrus_nattereri
MGP_PahariEiJ_G0028539	Raver2	100	97.380	ENSRNOG00000023812	Raver2	97	95.712	Rattus_norvegicus
MGP_PahariEiJ_G0028539	Raver2	91	84.762	ENSRBIG00000044090	RAVER2	98	75.076	Rhinopithecus_bieti
MGP_PahariEiJ_G0028539	Raver2	91	80.837	ENSRROG00000041867	RAVER2	90	80.837	Rhinopithecus_roxellana
MGP_PahariEiJ_G0028539	Raver2	92	78.788	ENSSBOG00000023706	RAVER2	100	78.788	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0028539	Raver2	84	74.872	ENSSHAG00000014568	RAVER2	100	69.368	Sarcophilus_harrisii
MGP_PahariEiJ_G0028539	Raver2	80	56.948	ENSSFOG00015013015	raver2	69	49.805	Scleropages_formosus
MGP_PahariEiJ_G0028539	Raver2	75	63.450	ENSSFOG00015001335	raver2	83	59.530	Scleropages_formosus
MGP_PahariEiJ_G0028539	Raver2	91	56.770	ENSSMAG00000020654	raver2	70	46.667	Scophthalmus_maximus
MGP_PahariEiJ_G0028539	Raver2	92	56.501	ENSSDUG00000013065	raver2	71	45.736	Seriola_dumerili
MGP_PahariEiJ_G0028539	Raver2	92	56.635	ENSSLDG00000002746	raver2	72	45.652	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0028539	Raver2	92	71.698	ENSSPUG00000016441	RAVER2	96	66.409	Sphenodon_punctatus
MGP_PahariEiJ_G0028539	Raver2	89	56.127	ENSSPAG00000004134	raver2	90	55.949	Stegastes_partitus
MGP_PahariEiJ_G0028539	Raver2	92	84.670	ENSSSCG00000025672	-	93	80.912	Sus_scrofa
MGP_PahariEiJ_G0028539	Raver2	60	78.339	ENSSSCG00000037672	-	66	76.842	Sus_scrofa
MGP_PahariEiJ_G0028539	Raver2	81	71.274	ENSTGUG00000009973	RAVER2	99	61.634	Taeniopygia_guttata
MGP_PahariEiJ_G0028539	Raver2	86	55.443	ENSTRUG00000018541	raver2	86	55.443	Takifugu_rubripes
MGP_PahariEiJ_G0028539	Raver2	78	60.504	ENSTNIG00000018106	raver2	66	76.667	Tetraodon_nigroviridis
MGP_PahariEiJ_G0028539	Raver2	89	71.829	ENSTBEG00000009004	RAVER2	100	69.206	Tupaia_belangeri
MGP_PahariEiJ_G0028539	Raver2	82	88.462	ENSTTRG00000009692	RAVER2	81	88.462	Tursiops_truncatus
MGP_PahariEiJ_G0028539	Raver2	84	80.670	ENSUAMG00000007847	RAVER2	84	78.114	Ursus_americanus
MGP_PahariEiJ_G0028539	Raver2	89	78.618	ENSUMAG00000008489	RAVER2	93	78.618	Ursus_maritimus
MGP_PahariEiJ_G0028539	Raver2	93	80.763	ENSVVUG00000013993	RAVER2	100	80.763	Vulpes_vulpes
MGP_PahariEiJ_G0028539	Raver2	78	60.833	ENSXETG00000020406	raver2	79	52.661	Xenopus_tropicalis
MGP_PahariEiJ_G0028539	Raver2	50	66.228	ENSXCOG00000008271	-	74	65.517	Xiphophorus_couchianus
MGP_PahariEiJ_G0028539	Raver2	91	56.938	ENSXMAG00000002206	raver2	70	47.874	Xiphophorus_maculatus