EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0028654 (Gene tree)
Gene ID: 110323532
Gene Symbol: -
Alias: -
Full Name: sperm head and tail associated protein
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 19982 bases
Position: chr6:67185040-67205021
Accession: 110323531
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0078837	Methyltr_RsmB-F	PF01189.17	3.7e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0078839	-	3949	-	MGP_PahariEiJ_P0078839	811 (aa)	XP_021056459	UPI000A3051A5
MGP_PahariEiJ_T0078838	-	1935	-	MGP_PahariEiJ_P0078838	57 (aa)	-	-
MGP_PahariEiJ_T0078837	-	2452	-	MGP_PahariEiJ_P0078837	381 (aa)	XP_021056460	UPI000A311C03
MGP_PahariEiJ_T0078840	-	543	-	-	- (aa)	-	-
MGP_PahariEiJ_T0078841	-	310	-	-	- (aa)	-	-
MGP_PahariEiJ_T0078842	-	327	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0028654's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0028654's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0028654	-	89	37.537	MGP_PahariEiJ_G0016560	Nsun3	91	37.537

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0028654	-	100	97.375	MGP_CAROLIEiJ_G0026322	-	100	97.375	Mus_caroli
MGP_PahariEiJ_G0028654	-	100	96.588	MGP_SPRETEiJ_G0027294	-	100	96.588	Mus_spretus