EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0028784 (Gene tree)
Gene ID: 110323083
Gene Symbol: Yrdc
Alias: IRIP
Full Name: yrdC N6-threonylcarbamoyltransferase domain containing
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 4668 bases
Position: chr6:75926033-75930700
Accession: 110323083
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0079413	Sua5_yciO_yrdC	PF01300.18	3e-43	1	1
MGP_PahariEiJ_P0079414	Sua5_yciO_yrdC	PF01300.18	7.8e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0079413	-	1621	-	MGP_PahariEiJ_P0079413	280 (aa)	XP_021055807	UPI000A312A2E
MGP_PahariEiJ_T0079414	-	705	-	MGP_PahariEiJ_P0079414	105 (aa)	-	-
MGP_PahariEiJ_T0079415	-	512	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0028784's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0028784's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0028784	Yrdc	100	92.381	ENSG00000196449	YRDC	99	85.252	Homo_sapiens
MGP_PahariEiJ_G0028784	Yrdc	99	70.192	ENSAPOG00000024293	yrdc	88	57.692	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0028784	Yrdc	100	89.524	ENSAMEG00000001173	YRDC	99	86.631	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0028784	Yrdc	100	69.524	ENSACIG00000017330	yrdc	86	59.657	Amphilophus_citrinellus
MGP_PahariEiJ_G0028784	Yrdc	100	69.524	ENSAOCG00000021647	yrdc	88	58.298	Amphiprion_ocellaris
MGP_PahariEiJ_G0028784	Yrdc	100	69.524	ENSAPEG00000006164	yrdc	79	62.201	Amphiprion_percula
MGP_PahariEiJ_G0028784	Yrdc	100	68.571	ENSATEG00000010086	yrdc	75	64.216	Anabas_testudineus
MGP_PahariEiJ_G0028784	Yrdc	100	71.429	ENSACAG00000017203	YRDC	100	63.380	Anolis_carolinensis
MGP_PahariEiJ_G0028784	Yrdc	100	91.429	ENSANAG00000028788	-	93	86.878	Aotus_nancymaae
MGP_PahariEiJ_G0028784	Yrdc	100	86.667	ENSANAG00000031052	-	97	78.467	Aotus_nancymaae
MGP_PahariEiJ_G0028784	Yrdc	99	70.192	ENSACLG00000027775	yrdc	84	59.825	Astatotilapia_calliptera
MGP_PahariEiJ_G0028784	Yrdc	100	68.571	ENSAMXG00000037791	yrdc	88	58.723	Astyanax_mexicanus
MGP_PahariEiJ_G0028784	Yrdc	100	93.333	ENSBTAG00000006510	YRDC	99	83.513	Bos_taurus
MGP_PahariEiJ_G0028784	Yrdc	100	39.623	WBGene00012997	Y48C3A.18	100	37.600	Caenorhabditis_elegans
MGP_PahariEiJ_G0028784	Yrdc	100	92.381	ENSCJAG00000002078	YRDC	76	85.612	Callithrix_jacchus
MGP_PahariEiJ_G0028784	Yrdc	100	85.714	ENSCAFG00000003253	YRDC	99	77.500	Canis_familiaris
MGP_PahariEiJ_G0028784	Yrdc	100	85.714	ENSCAFG00020007843	YRDC	99	79.643	Canis_lupus_dingo
MGP_PahariEiJ_G0028784	Yrdc	100	90.476	ENSCHIG00000007882	YRDC	99	83.154	Capra_hircus
MGP_PahariEiJ_G0028784	Yrdc	100	91.429	ENSTSYG00000005555	YRDC	62	90.230	Carlito_syrichta
MGP_PahariEiJ_G0028784	Yrdc	100	88.571	ENSCPOG00000036144	YRDC	100	82.500	Cavia_porcellus
MGP_PahariEiJ_G0028784	Yrdc	100	92.381	ENSCCAG00000028891	YRDC	99	85.612	Cebus_capucinus
MGP_PahariEiJ_G0028784	Yrdc	100	90.476	ENSCATG00000036928	YRDC	99	84.173	Cercocebus_atys
MGP_PahariEiJ_G0028784	Yrdc	100	90.476	ENSCLAG00000015012	YRDC	100	85.357	Chinchilla_lanigera
MGP_PahariEiJ_G0028784	Yrdc	100	90.476	ENSCSAG00000001116	YRDC	99	84.173	Chlorocebus_sabaeus
MGP_PahariEiJ_G0028784	Yrdc	75	80.383	ENSCHOG00000005500	YRDC	100	80.383	Choloepus_hoffmanni
MGP_PahariEiJ_G0028784	Yrdc	100	75.238	ENSCPBG00000018446	YRDC	92	67.593	Chrysemys_picta_bellii
MGP_PahariEiJ_G0028784	Yrdc	99	50.459	ENSCING00000007564	-	98	49.765	Ciona_intestinalis
MGP_PahariEiJ_G0028784	Yrdc	99	49.541	ENSCSAVG00000009982	-	98	47.867	Ciona_savignyi
MGP_PahariEiJ_G0028784	Yrdc	100	91.429	ENSCANG00000031111	YRDC	99	84.532	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0028784	Yrdc	100	90.476	ENSCGRG00001000829	-	77	85.612	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0028784	Yrdc	100	93.333	ENSCGRG00001014496	-	100	92.143	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0028784	Yrdc	100	93.333	ENSCGRG00000001307	-	100	92.913	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0028784	Yrdc	99	70.192	ENSCSEG00000019075	yrdc	75	62.201	Cynoglossus_semilaevis
MGP_PahariEiJ_G0028784	Yrdc	100	64.762	ENSCVAG00000017355	yrdc	86	57.143	Cyprinodon_variegatus
MGP_PahariEiJ_G0028784	Yrdc	100	63.810	ENSDARG00000041428	yrdc	95	57.456	Danio_rerio
MGP_PahariEiJ_G0028784	Yrdc	100	67.290	ENSDNOG00000036198	-	97	61.000	Dasypus_novemcinctus
MGP_PahariEiJ_G0028784	Yrdc	100	89.524	ENSDNOG00000038789	-	100	83.594	Dasypus_novemcinctus
MGP_PahariEiJ_G0028784	Yrdc	100	92.381	ENSDORG00000008788	Yrdc	87	90.355	Dipodomys_ordii
MGP_PahariEiJ_G0028784	Yrdc	100	53.271	FBgn0061361	CG33786	81	48.020	Drosophila_melanogaster
MGP_PahariEiJ_G0028784	Yrdc	85	89.888	ENSETEG00000003442	YRDC	100	71.429	Echinops_telfairi
MGP_PahariEiJ_G0028784	Yrdc	99	58.654	ENSEBUG00000014080	yrdc	94	51.101	Eptatretus_burgeri
MGP_PahariEiJ_G0028784	Yrdc	100	92.381	ENSEASG00005012253	YRDC	99	84.946	Equus_asinus_asinus
MGP_PahariEiJ_G0028784	Yrdc	100	92.381	ENSECAG00000022522	YRDC	99	85.305	Equus_caballus
MGP_PahariEiJ_G0028784	Yrdc	100	71.429	ENSELUG00000018071	yrdc	76	60.086	Esox_lucius
MGP_PahariEiJ_G0028784	Yrdc	100	89.524	ENSFCAG00000011018	YRDC	100	85.714	Felis_catus
MGP_PahariEiJ_G0028784	Yrdc	69	31.604	ENSFALG00000011333	-	53	31.280	Ficedula_albicollis
MGP_PahariEiJ_G0028784	Yrdc	100	80.952	ENSFALG00000000964	YRDC	89	72.821	Ficedula_albicollis
MGP_PahariEiJ_G0028784	Yrdc	100	92.381	ENSFDAG00000016507	-	100	92.381	Fukomys_damarensis
MGP_PahariEiJ_G0028784	Yrdc	100	66.667	ENSFHEG00000001029	yrdc	96	53.414	Fundulus_heteroclitus
MGP_PahariEiJ_G0028784	Yrdc	100	69.524	ENSGMOG00000015635	yrdc	97	63.725	Gadus_morhua
MGP_PahariEiJ_G0028784	Yrdc	100	78.095	ENSGALG00000029001	YRDC	87	68.282	Gallus_gallus
MGP_PahariEiJ_G0028784	Yrdc	69	31.754	ENSGALG00000025899	-	67	31.754	Gallus_gallus
MGP_PahariEiJ_G0028784	Yrdc	100	64.762	ENSGAFG00000008396	yrdc	85	56.710	Gambusia_affinis
MGP_PahariEiJ_G0028784	Yrdc	100	66.667	ENSGACG00000013878	yrdc	95	57.328	Gasterosteus_aculeatus
MGP_PahariEiJ_G0028784	Yrdc	100	77.143	ENSGAGG00000014968	YRDC	96	68.018	Gopherus_agassizii
MGP_PahariEiJ_G0028784	Yrdc	100	92.381	ENSGGOG00000007619	YRDC	99	85.252	Gorilla_gorilla
MGP_PahariEiJ_G0028784	Yrdc	99	71.154	ENSHBUG00000009298	yrdc	84	60.262	Haplochromis_burtoni
MGP_PahariEiJ_G0028784	Yrdc	100	91.429	ENSHGLG00000014075	YRDC	100	85.714	Heterocephalus_glaber_female
MGP_PahariEiJ_G0028784	Yrdc	100	91.429	ENSHGLG00100002734	YRDC	100	76.786	Heterocephalus_glaber_male
MGP_PahariEiJ_G0028784	Yrdc	100	62.857	ENSHCOG00000006598	yrdc	88	57.709	Hippocampus_comes
MGP_PahariEiJ_G0028784	Yrdc	100	68.571	ENSIPUG00000014985	yrdc	92	58.850	Ictalurus_punctatus
MGP_PahariEiJ_G0028784	Yrdc	100	94.286	ENSSTOG00000001643	YRDC	99	85.663	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0028784	Yrdc	100	94.286	ENSJJAG00000023117	-	100	94.286	Jaculus_jaculus
MGP_PahariEiJ_G0028784	Yrdc	99	71.154	ENSKMAG00000013468	yrdc	86	59.402	Kryptolebias_marmoratus
MGP_PahariEiJ_G0028784	Yrdc	100	71.429	ENSLBEG00000027501	yrdc	84	60.262	Labrus_bergylta
MGP_PahariEiJ_G0028784	Yrdc	100	73.333	ENSLACG00000010689	YRDC	95	64.251	Latimeria_chalumnae
MGP_PahariEiJ_G0028784	Yrdc	69	31.776	ENSLACG00000017624	si:ch211-153b23.3	62	31.776	Latimeria_chalumnae
MGP_PahariEiJ_G0028784	Yrdc	100	70.476	ENSLOCG00000003321	yrdc	86	62.857	Lepisosteus_oculatus
MGP_PahariEiJ_G0028784	Yrdc	100	89.524	ENSLAFG00000017556	YRDC	100	83.571	Loxodonta_africana
MGP_PahariEiJ_G0028784	Yrdc	100	90.476	ENSMFAG00000003487	YRDC	99	89.048	Macaca_fascicularis
MGP_PahariEiJ_G0028784	Yrdc	100	90.476	ENSMMUG00000005372	YRDC	74	84.173	Macaca_mulatta
MGP_PahariEiJ_G0028784	Yrdc	100	90.476	ENSMNEG00000029348	YRDC	99	84.173	Macaca_nemestrina
MGP_PahariEiJ_G0028784	Yrdc	100	90.476	ENSMLEG00000041122	YRDC	99	87.248	Mandrillus_leucophaeus
MGP_PahariEiJ_G0028784	Yrdc	100	66.667	ENSMAMG00000007315	yrdc	79	60.930	Mastacembelus_armatus
MGP_PahariEiJ_G0028784	Yrdc	99	70.192	ENSMZEG00005006948	yrdc	84	59.825	Maylandia_zebra
MGP_PahariEiJ_G0028784	Yrdc	69	31.754	ENSMGAG00000005489	-	53	31.754	Meleagris_gallopavo
MGP_PahariEiJ_G0028784	Yrdc	100	78.095	ENSMGAG00000002833	YRDC	99	70.297	Meleagris_gallopavo
MGP_PahariEiJ_G0028784	Yrdc	100	94.286	ENSMAUG00000003715	-	100	94.286	Mesocricetus_auratus
MGP_PahariEiJ_G0028784	Yrdc	100	94.286	ENSMICG00000031688	YRDC	100	85.663	Microcebus_murinus
MGP_PahariEiJ_G0028784	Yrdc	75	90.431	ENSMOCG00000000164	-	81	90.431	Microtus_ochrogaster
MGP_PahariEiJ_G0028784	Yrdc	100	68.571	ENSMMOG00000002119	yrdc	86	58.974	Mola_mola
MGP_PahariEiJ_G0028784	Yrdc	100	85.714	ENSMODG00000017750	YRDC	98	69.751	Monodelphis_domestica
MGP_PahariEiJ_G0028784	Yrdc	100	71.429	ENSMALG00000012471	yrdc	85	60.526	Monopterus_albus
MGP_PahariEiJ_G0028784	Yrdc	98	98.058	MGP_CAROLIEiJ_G0026453	Yrdc	98	98.058	Mus_caroli
MGP_PahariEiJ_G0028784	Yrdc	100	99.048	ENSMUSG00000028889	Yrdc	100	99.048	Mus_musculus
MGP_PahariEiJ_G0028784	Yrdc	100	99.048	MGP_SPRETEiJ_G0027432	Yrdc	100	98.214	Mus_spretus
MGP_PahariEiJ_G0028784	Yrdc	100	88.571	ENSMPUG00000014542	YRDC	87	86.697	Mustela_putorius_furo
MGP_PahariEiJ_G0028784	Yrdc	100	75.238	ENSMLUG00000028796	-	98	62.681	Myotis_lucifugus
MGP_PahariEiJ_G0028784	Yrdc	100	89.524	ENSMLUG00000000955	-	99	83.333	Myotis_lucifugus
MGP_PahariEiJ_G0028784	Yrdc	100	85.714	ENSMLUG00000024310	-	96	80.513	Myotis_lucifugus
MGP_PahariEiJ_G0028784	Yrdc	100	91.429	ENSNGAG00000019099	Yrdc	100	83.571	Nannospalax_galili
MGP_PahariEiJ_G0028784	Yrdc	99	71.154	ENSNBRG00000009475	yrdc	86	59.402	Neolamprologus_brichardi
MGP_PahariEiJ_G0028784	Yrdc	100	92.381	ENSNLEG00000011665	YRDC	99	84.892	Nomascus_leucogenys
MGP_PahariEiJ_G0028784	Yrdc	100	87.619	ENSMEUG00000005068	YRDC	100	82.326	Notamacropus_eugenii
MGP_PahariEiJ_G0028784	Yrdc	100	91.429	ENSODEG00000007401	YRDC	100	91.429	Octodon_degus
MGP_PahariEiJ_G0028784	Yrdc	100	70.476	ENSONIG00000016213	yrdc	97	59.402	Oreochromis_niloticus
MGP_PahariEiJ_G0028784	Yrdc	95	76.238	ENSOANG00000002048	-	95	72.727	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0028784	Yrdc	100	91.429	ENSOCUG00000005384	YRDC	96	86.071	Oryctolagus_cuniculus
MGP_PahariEiJ_G0028784	Yrdc	99	65.385	ENSORLG00000014393	yrdc	86	56.466	Oryzias_latipes
MGP_PahariEiJ_G0028784	Yrdc	99	65.385	ENSORLG00020019663	yrdc	86	56.522	Oryzias_latipes_hni
MGP_PahariEiJ_G0028784	Yrdc	99	65.385	ENSORLG00015004625	yrdc	86	56.087	Oryzias_latipes_hsok
MGP_PahariEiJ_G0028784	Yrdc	99	65.385	ENSOMEG00000018550	yrdc	92	54.508	Oryzias_melastigma
MGP_PahariEiJ_G0028784	Yrdc	100	91.429	ENSOGAG00000030474	YRDC	100	84.420	Otolemur_garnettii
MGP_PahariEiJ_G0028784	Yrdc	100	90.476	ENSOARG00000019873	YRDC	95	81.343	Ovis_aries
MGP_PahariEiJ_G0028784	Yrdc	100	92.381	ENSPPAG00000039722	-	99	88.435	Pan_paniscus
MGP_PahariEiJ_G0028784	Yrdc	100	88.571	ENSPPRG00000007752	YRDC	100	85.357	Panthera_pardus
MGP_PahariEiJ_G0028784	Yrdc	100	88.571	ENSPTIG00000019821	YRDC	68	83.544	Panthera_tigris_altaica
MGP_PahariEiJ_G0028784	Yrdc	100	92.381	ENSPTRG00000000557	YRDC	99	85.612	Pan_troglodytes
MGP_PahariEiJ_G0028784	Yrdc	100	90.476	ENSPANG00000006487	YRDC	75	84.173	Papio_anubis
MGP_PahariEiJ_G0028784	Yrdc	100	68.571	ENSPKIG00000004574	yrdc	84	59.052	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0028784	Yrdc	100	76.190	ENSPSIG00000006483	YRDC	92	60.920	Pelodiscus_sinensis
MGP_PahariEiJ_G0028784	Yrdc	100	68.571	ENSPMGG00000004184	yrdc	88	58.261	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0028784	Yrdc	100	93.333	ENSPEMG00000016985	Yrdc	90	80.180	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0028784	Yrdc	98	54.808	ENSPMAG00000002905	yrdc	96	56.742	Petromyzon_marinus
MGP_PahariEiJ_G0028784	Yrdc	100	87.619	ENSPCIG00000025731	YRDC	98	72.242	Phascolarctos_cinereus
MGP_PahariEiJ_G0028784	Yrdc	100	66.667	ENSPFOG00000023097	yrdc	85	57.143	Poecilia_formosa
MGP_PahariEiJ_G0028784	Yrdc	100	65.714	ENSPLAG00000020882	yrdc	85	56.710	Poecilia_latipinna
MGP_PahariEiJ_G0028784	Yrdc	100	66.667	ENSPMEG00000013237	yrdc	86	57.143	Poecilia_mexicana
MGP_PahariEiJ_G0028784	Yrdc	100	66.667	ENSPREG00000005285	yrdc	85	57.143	Poecilia_reticulata
MGP_PahariEiJ_G0028784	Yrdc	100	92.381	ENSPPYG00000001523	-	97	85.654	Pongo_abelii
MGP_PahariEiJ_G0028784	Yrdc	100	86.667	ENSPCAG00000016850	YRDC	99	83.394	Procavia_capensis
MGP_PahariEiJ_G0028784	Yrdc	100	95.238	ENSPCOG00000013214	YRDC	99	85.305	Propithecus_coquereli
MGP_PahariEiJ_G0028784	Yrdc	100	92.381	ENSPVAG00000010147	YRDC	99	85.507	Pteropus_vampyrus
MGP_PahariEiJ_G0028784	Yrdc	99	71.154	ENSPNYG00000013956	yrdc	84	60.262	Pundamilia_nyererei
MGP_PahariEiJ_G0028784	Yrdc	98	68.932	ENSPNAG00000015625	yrdc	86	59.624	Pygocentrus_nattereri
MGP_PahariEiJ_G0028784	Yrdc	100	96.190	ENSRNOG00000025424	Yrdc	100	95.714	Rattus_norvegicus
MGP_PahariEiJ_G0028784	Yrdc	100	91.429	ENSRBIG00000032289	YRDC	99	84.173	Rhinopithecus_bieti
MGP_PahariEiJ_G0028784	Yrdc	100	91.429	ENSRROG00000039370	YRDC	71	89.474	Rhinopithecus_roxellana
MGP_PahariEiJ_G0028784	Yrdc	100	92.381	ENSSBOG00000018937	YRDC	99	81.034	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0028784	Yrdc	100	84.762	ENSSHAG00000013957	-	100	81.081	Sarcophilus_harrisii
MGP_PahariEiJ_G0028784	Yrdc	100	69.524	ENSSFOG00015006128	yrdc	88	63.592	Scleropages_formosus
MGP_PahariEiJ_G0028784	Yrdc	100	71.429	ENSSMAG00000005195	yrdc	86	59.825	Scophthalmus_maximus
MGP_PahariEiJ_G0028784	Yrdc	67	31.343	ENSSDUG00000006736	-	90	31.792	Seriola_dumerili
MGP_PahariEiJ_G0028784	Yrdc	100	68.571	ENSSDUG00000009775	yrdc	87	58.723	Seriola_dumerili
MGP_PahariEiJ_G0028784	Yrdc	100	68.571	ENSSLDG00000003196	yrdc	87	58.723	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0028784	Yrdc	100	73.333	ENSSPUG00000003946	YRDC	97	58.687	Sphenodon_punctatus
MGP_PahariEiJ_G0028784	Yrdc	100	66.667	ENSSPAG00000012559	yrdc	87	56.170	Stegastes_partitus
MGP_PahariEiJ_G0028784	Yrdc	100	91.429	ENSSSCG00000040425	YRDC	100	84.286	Sus_scrofa
MGP_PahariEiJ_G0028784	Yrdc	100	80.952	ENSTGUG00000001507	YRDC	98	76.389	Taeniopygia_guttata
MGP_PahariEiJ_G0028784	Yrdc	100	60.952	ENSTRUG00000005923	yrdc	87	55.417	Takifugu_rubripes
MGP_PahariEiJ_G0028784	Yrdc	98	89.320	ENSTBEG00000008863	YRDC	96	89.333	Tupaia_belangeri
MGP_PahariEiJ_G0028784	Yrdc	100	91.429	ENSTTRG00000013538	-	99	85.811	Tursiops_truncatus
MGP_PahariEiJ_G0028784	Yrdc	100	89.524	ENSUAMG00000006150	YRDC	100	87.685	Ursus_americanus
MGP_PahariEiJ_G0028784	Yrdc	85	94.382	ENSVPAG00000006642	YRDC	100	72.766	Vicugna_pacos
MGP_PahariEiJ_G0028784	Yrdc	100	86.667	ENSVVUG00000023132	-	50	83.553	Vulpes_vulpes
MGP_PahariEiJ_G0028784	Yrdc	100	75.238	ENSXETG00000014420	yrdc	97	62.931	Xenopus_tropicalis
MGP_PahariEiJ_G0028784	Yrdc	100	64.762	ENSXCOG00000000829	yrdc	95	56.277	Xiphophorus_couchianus
MGP_PahariEiJ_G0028784	Yrdc	100	62.857	ENSXMAG00000014606	yrdc	80	55.411	Xiphophorus_maculatus