EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0028802 (Gene tree)
Gene ID: 110323292
Gene Symbol: -
Alias: -
Full Name: thyroid hormone receptor associated protein 3
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 40251 bases
Position: chr6:77228935-77269185
Accession: 110323292
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0079479	THRAP3_BCLAF1	PF15440.6	6.4e-53	1	1
MGP_PahariEiJ_P0079477	THRAP3_BCLAF1	PF15440.6	1.7e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0079481	-	355	-	MGP_PahariEiJ_P0079481	53 (aa)	-	UPI000059E0EB
MGP_PahariEiJ_T0079480	-	573	-	MGP_PahariEiJ_P0079480	59 (aa)	-	-
MGP_PahariEiJ_T0079483	-	561	-	-	- (aa)	-	-
MGP_PahariEiJ_T0079482	-	340	-	MGP_PahariEiJ_P0079482	50 (aa)	-	UPI0003F4856F
MGP_PahariEiJ_T0079485	-	387	-	MGP_PahariEiJ_P0079485	29 (aa)	-	UPI000059E0EA
MGP_PahariEiJ_T0079484	-	519	-	-	- (aa)	-	-
MGP_PahariEiJ_T0079487	-	357	-	MGP_PahariEiJ_P0079487	25 (aa)	-	UPI0001F78939
MGP_PahariEiJ_T0079486	-	630	-	MGP_PahariEiJ_P0079486	27 (aa)	-	UPI000059E0E9
MGP_PahariEiJ_T0079478	-	688	-	MGP_PahariEiJ_P0079478	43 (aa)	-	UPI0001F78935
MGP_PahariEiJ_T0079479	-	407	-	MGP_PahariEiJ_P0079479	135 (aa)	-	-
MGP_PahariEiJ_T0079475	-	4478	-	MGP_PahariEiJ_P0079475	951 (aa)	XP_021056099	UPI000A30D739
MGP_PahariEiJ_T0079476	-	539	-	-	- (aa)	-	-
MGP_PahariEiJ_T0079477	-	506	-	MGP_PahariEiJ_P0079477	168 (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0028802's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0028802's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0028802	-	97	44.776	ENSG00000029363	BCLAF1	52	53.731	Homo_sapiens
MGP_PahariEiJ_G0028802	-	100	98.824	ENSG00000054118	THRAP3	94	92.478	Homo_sapiens
MGP_PahariEiJ_G0028802	-	55	41.333	ENSG00000173681	BCLAF3	70	35.556	Homo_sapiens
MGP_PahariEiJ_G0028802	-	77	56.757	ENSAPOG00000001848	thrap3b	54	60.714	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0028802	-	100	97.297	ENSAMEG00000000379	THRAP3	94	91.463	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0028802	-	77	56.757	ENSAOCG00000015572	thrap3b	51	61.176	Amphiprion_ocellaris
MGP_PahariEiJ_G0028802	-	100	91.765	ENSAPLG00000009009	THRAP3	94	80.219	Anas_platyrhynchos
MGP_PahariEiJ_G0028802	-	94	91.925	ENSANAG00000024479	-	94	91.925	Aotus_nancymaae
MGP_PahariEiJ_G0028802	-	100	94.118	ENSANAG00000023367	-	94	86.865	Aotus_nancymaae
MGP_PahariEiJ_G0028802	-	55	37.333	ENSANAG00000029066	-	51	36.441	Aotus_nancymaae
MGP_PahariEiJ_G0028802	-	100	62.162	ENSACLG00000027851	thrap3a	50	52.419	Astatotilapia_calliptera
MGP_PahariEiJ_G0028802	-	61	60.241	ENSACLG00000004763	thrap3b	69	38.415	Astatotilapia_calliptera
MGP_PahariEiJ_G0028802	-	76	54.054	ENSAMXG00000020877	thrap3b	61	40.338	Astyanax_mexicanus
MGP_PahariEiJ_G0028802	-	100	97.297	ENSBTAG00000024095	THRAP3	94	93.023	Bos_taurus
MGP_PahariEiJ_G0028802	-	94	92.035	ENSCJAG00000001754	THRAP3	94	92.035	Callithrix_jacchus
MGP_PahariEiJ_G0028802	-	100	97.297	ENSCAFG00000003389	THRAP3	94	92.137	Canis_familiaris
MGP_PahariEiJ_G0028802	-	100	97.297	ENSCAFG00020008982	THRAP3	94	92.137	Canis_lupus_dingo
MGP_PahariEiJ_G0028802	-	100	97.297	ENSCHIG00000022784	THRAP3	94	92.802	Capra_hircus
MGP_PahariEiJ_G0028802	-	100	97.297	ENSTSYG00000012214	-	96	92.478	Carlito_syrichta
MGP_PahariEiJ_G0028802	-	93	92.941	ENSTSYG00000011370	-	83	74.446	Carlito_syrichta
MGP_PahariEiJ_G0028802	-	94	92.436	ENSCPOG00000015742	THRAP3	94	91.769	Cavia_porcellus
MGP_PahariEiJ_G0028802	-	94	92.257	ENSCCAG00000028401	THRAP3	94	92.257	Cebus_capucinus
MGP_PahariEiJ_G0028802	-	100	98.824	ENSCATG00000038343	-	94	92.257	Cercocebus_atys
MGP_PahariEiJ_G0028802	-	100	83.333	ENSCATG00000035101	-	99	64.815	Cercocebus_atys
MGP_PahariEiJ_G0028802	-	94	93.882	ENSCLAG00000013043	THRAP3	94	93.882	Chinchilla_lanigera
MGP_PahariEiJ_G0028802	-	100	98.824	ENSCSAG00000001098	THRAP3	94	91.925	Chlorocebus_sabaeus
MGP_PahariEiJ_G0028802	-	100	81.132	ENSCHOG00000008973	THRAP3	80	100.000	Choloepus_hoffmanni
MGP_PahariEiJ_G0028802	-	99	94.048	ENSCPBG00000018530	THRAP3	94	80.437	Chrysemys_picta_bellii
MGP_PahariEiJ_G0028802	-	100	98.824	ENSCANG00000043028	THRAP3	94	92.035	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0028802	-	56	42.105	ENSCANG00000003205	-	52	39.410	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0028802	-	100	97.374	ENSCGRG00001003105	Thrap3	100	97.374	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0028802	-	100	97.674	ENSCGRG00000017028	Thrap3	100	97.374	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0028802	-	77	49.038	ENSCGRG00000009622	-	70	36.297	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0028802	-	62	56.757	ENSCSEG00000010392	thrap3b	54	58.000	Cynoglossus_semilaevis
MGP_PahariEiJ_G0028802	-	100	56.757	ENSDARG00000101989	thrap3a	70	38.321	Danio_rerio
MGP_PahariEiJ_G0028802	-	61	69.880	ENSDARG00000098228	thrap3b	68	38.897	Danio_rerio
MGP_PahariEiJ_G0028802	-	94	90.044	ENSDNOG00000031470	THRAP3	94	89.602	Dasypus_novemcinctus
MGP_PahariEiJ_G0028802	-	100	90.196	ENSDORG00000013216	Thrap3	94	94.216	Dipodomys_ordii
MGP_PahariEiJ_G0028802	-	80	100.000	ENSETEG00000003542	THRAP3	93	84.497	Echinops_telfairi
MGP_PahariEiJ_G0028802	-	100	97.297	ENSEASG00005012182	THRAP3	94	92.027	Equus_asinus_asinus
MGP_PahariEiJ_G0028802	-	100	97.297	ENSECAG00000021207	THRAP3	94	92.027	Equus_caballus
MGP_PahariEiJ_G0028802	-	100	97.297	ENSEEUG00000004939	THRAP3	76	93.166	Erinaceus_europaeus
MGP_PahariEiJ_G0028802	-	93	40.498	ENSELUG00000017733	thrap3a	68	42.033	Esox_lucius
MGP_PahariEiJ_G0028802	-	71	59.459	ENSELUG00000007499	thrap3b	66	38.653	Esox_lucius
MGP_PahariEiJ_G0028802	-	94	92.359	ENSFCAG00000014127	THRAP3	94	92.359	Felis_catus
MGP_PahariEiJ_G0028802	-	100	90.588	ENSFALG00000000840	THRAP3	95	75.000	Ficedula_albicollis
MGP_PahariEiJ_G0028802	-	94	93.875	ENSFDAG00000009011	THRAP3	94	94.209	Fukomys_damarensis
MGP_PahariEiJ_G0028802	-	60	59.259	ENSGMOG00000006512	thrap3a	53	46.114	Gadus_morhua
MGP_PahariEiJ_G0028802	-	100	92.941	ENSGALG00000002144	THRAP3	94	79.737	Gallus_gallus
MGP_PahariEiJ_G0028802	-	99	95.238	ENSGAGG00000024863	THRAP3	94	80.546	Gopherus_agassizii
MGP_PahariEiJ_G0028802	-	100	98.824	ENSGGOG00000006917	THRAP3	94	92.367	Gorilla_gorilla
MGP_PahariEiJ_G0028802	-	100	62.162	ENSHBUG00000009602	thrap3a	50	52.151	Haplochromis_burtoni
MGP_PahariEiJ_G0028802	-	77	56.757	ENSHBUG00000001708	thrap3b	65	38.545	Haplochromis_burtoni
MGP_PahariEiJ_G0028802	-	55	86.095	ENSHGLG00000015805	-	90	84.280	Heterocephalus_glaber_female
MGP_PahariEiJ_G0028802	-	94	92.316	ENSHGLG00000019374	THRAP3	94	91.982	Heterocephalus_glaber_female
MGP_PahariEiJ_G0028802	-	94	92.316	ENSHGLG00100007382	THRAP3	94	91.982	Heterocephalus_glaber_male
MGP_PahariEiJ_G0028802	-	55	85.714	ENSHGLG00100015946	-	90	83.902	Heterocephalus_glaber_male
MGP_PahariEiJ_G0028802	-	61	54.217	ENSHCOG00000004098	thrap3b	56	53.659	Hippocampus_comes
MGP_PahariEiJ_G0028802	-	61	42.683	ENSIPUG00000015339	thrap3a	51	32.992	Ictalurus_punctatus
MGP_PahariEiJ_G0028802	-	61	63.855	ENSIPUG00000005707	thrap3b	68	39.728	Ictalurus_punctatus
MGP_PahariEiJ_G0028802	-	100	88.235	ENSSTOG00000000602	THRAP3	94	93.889	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0028802	-	61	62.651	ENSKMAG00000012105	thrap3b	52	61.458	Kryptolebias_marmoratus
MGP_PahariEiJ_G0028802	-	77	62.162	ENSKMAG00000005707	thrap3a	60	34.328	Kryptolebias_marmoratus
MGP_PahariEiJ_G0028802	-	100	98.824	ENSLAFG00000009587	THRAP3	94	92.146	Loxodonta_africana
MGP_PahariEiJ_G0028802	-	95	95.238	ENSMFAG00000045419	-	83	62.745	Macaca_fascicularis
MGP_PahariEiJ_G0028802	-	100	98.824	ENSMFAG00000040144	-	94	92.257	Macaca_fascicularis
MGP_PahariEiJ_G0028802	-	100	98.824	ENSMMUG00000014622	THRAP3	94	92.257	Macaca_mulatta
MGP_PahariEiJ_G0028802	-	92	94.048	ENSMNEG00000042630	-	99	66.667	Macaca_nemestrina
MGP_PahariEiJ_G0028802	-	100	98.824	ENSMNEG00000018987	-	94	87.404	Macaca_nemestrina
MGP_PahariEiJ_G0028802	-	100	98.824	ENSMLEG00000028924	THRAP3	94	92.257	Mandrillus_leucophaeus
MGP_PahariEiJ_G0028802	-	77	56.757	ENSMZEG00005026309	thrap3b	69	37.952	Maylandia_zebra
MGP_PahariEiJ_G0028802	-	100	62.162	ENSMZEG00005007212	thrap3a	50	52.419	Maylandia_zebra
MGP_PahariEiJ_G0028802	-	100	92.941	ENSMGAG00000003640	THRAP3	93	79.464	Meleagris_gallopavo
MGP_PahariEiJ_G0028802	-	100	97.269	ENSMAUG00000019723	Thrap3	100	97.269	Mesocricetus_auratus
MGP_PahariEiJ_G0028802	-	77	49.038	ENSMAUG00000020380	Bclaf1	59	65.217	Mesocricetus_auratus
MGP_PahariEiJ_G0028802	-	100	81.481	ENSMICG00000042555	-	89	89.269	Microcebus_murinus
MGP_PahariEiJ_G0028802	-	94	92.478	ENSMICG00000007920	-	94	92.478	Microcebus_murinus
MGP_PahariEiJ_G0028802	-	99	79.592	ENSMOCG00000006712	-	83	79.610	Microtus_ochrogaster
MGP_PahariEiJ_G0028802	-	100	96.429	ENSMOCG00000005500	-	100	96.429	Microtus_ochrogaster
MGP_PahariEiJ_G0028802	-	100	90.196	ENSMOCG00000004435	-	94	87.194	Microtus_ochrogaster
MGP_PahariEiJ_G0028802	-	50	36.765	ENSMMOG00000013104	zgc:112982	60	31.148	Mola_mola
MGP_PahariEiJ_G0028802	-	70	83.333	ENSMODG00000005601	-	100	69.909	Monodelphis_domestica
MGP_PahariEiJ_G0028802	-	94	75.246	ENSMODG00000017834	-	99	74.151	Monodelphis_domestica
MGP_PahariEiJ_G0028802	-	61	59.524	ENSMALG00000012582	thrap3b	54	65.789	Monopterus_albus
MGP_PahariEiJ_G0028802	-	80	48.148	MGP_CAROLIEiJ_G0015157	Bclaf1	70	35.953	Mus_caroli
MGP_PahariEiJ_G0028802	-	100	100.000	MGP_CAROLIEiJ_G0026471	-	100	100.000	Mus_caroli
MGP_PahariEiJ_G0028802	-	80	48.148	ENSMUSG00000037608	Bclaf1	79	34.174	Mus_musculus
MGP_PahariEiJ_G0028802	-	100	100.000	ENSMUSG00000043962	Thrap3	100	100.000	Mus_musculus
MGP_PahariEiJ_G0028802	-	100	100.000	MGP_SPRETEiJ_G0027450	Thrap3	100	100.000	Mus_spretus
MGP_PahariEiJ_G0028802	-	100	97.297	ENSMPUG00000014809	THRAP3	94	91.362	Mustela_putorius_furo
MGP_PahariEiJ_G0028802	-	100	97.297	ENSMLUG00000006447	THRAP3	94	91.898	Myotis_lucifugus
MGP_PahariEiJ_G0028802	-	94	94.661	ENSNGAG00000010876	Thrap3	94	94.661	Nannospalax_galili
MGP_PahariEiJ_G0028802	-	100	56.757	ENSNBRG00000014237	thrap3b	53	62.500	Neolamprologus_brichardi
MGP_PahariEiJ_G0028802	-	100	98.824	ENSNLEG00000011359	THRAP3	94	91.814	Nomascus_leucogenys
MGP_PahariEiJ_G0028802	-	100	97.647	ENSOPRG00000001637	THRAP3	94	88.688	Ochotona_princeps
MGP_PahariEiJ_G0028802	-	100	78.431	ENSODEG00000006090	-	78	100.000	Octodon_degus
MGP_PahariEiJ_G0028802	-	100	78.431	ENSODEG00000010768	-	92	79.142	Octodon_degus
MGP_PahariEiJ_G0028802	-	100	96.471	ENSOANG00000002070	THRAP3	94	85.414	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0028802	-	94	92.146	ENSOCUG00000005323	THRAP3	94	92.146	Oryctolagus_cuniculus
MGP_PahariEiJ_G0028802	-	61	71.084	ENSOMEG00000019164	thrap3a	50	40.343	Oryzias_melastigma
MGP_PahariEiJ_G0028802	-	100	83.333	ENSOGAG00000002648	THRAP3	94	88.398	Otolemur_garnettii
MGP_PahariEiJ_G0028802	-	94	92.802	ENSOARG00000019668	THRAP3	94	92.802	Ovis_aries
MGP_PahariEiJ_G0028802	-	97	44.776	ENSPPAG00000031645	BCLAF1	53	45.501	Pan_paniscus
MGP_PahariEiJ_G0028802	-	100	98.824	ENSPPAG00000028961	THRAP3	94	92.478	Pan_paniscus
MGP_PahariEiJ_G0028802	-	94	92.470	ENSPPRG00000001735	THRAP3	94	92.470	Panthera_pardus
MGP_PahariEiJ_G0028802	-	94	92.470	ENSPTIG00000016888	THRAP3	94	92.470	Panthera_tigris_altaica
MGP_PahariEiJ_G0028802	-	100	98.824	ENSPTRG00000000535	THRAP3	94	92.478	Pan_troglodytes
MGP_PahariEiJ_G0028802	-	100	98.824	ENSPANG00000010532	THRAP3	94	92.367	Papio_anubis
MGP_PahariEiJ_G0028802	-	79	55.970	ENSPKIG00000005150	thrap3a	77	45.093	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0028802	-	99	94.048	ENSPSIG00000010296	THRAP3	81	80.910	Pelodiscus_sinensis
MGP_PahariEiJ_G0028802	-	80	48.148	ENSPEMG00000012755	-	60	33.613	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0028802	-	100	96.471	ENSPEMG00000019304	-	97	86.441	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0028802	-	100	96.744	ENSPEMG00000023512	-	100	96.744	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0028802	-	56	45.455	ENSPMAG00000009307	-	92	41.689	Petromyzon_marinus
MGP_PahariEiJ_G0028802	-	100	94.118	ENSPCIG00000024805	THRAP3	94	84.061	Phascolarctos_cinereus
MGP_PahariEiJ_G0028802	-	77	56.757	ENSPFOG00000000525	thrap3b	69	38.275	Poecilia_formosa
MGP_PahariEiJ_G0028802	-	77	56.757	ENSPLAG00000016521	thrap3b	69	38.427	Poecilia_latipinna
MGP_PahariEiJ_G0028802	-	77	56.757	ENSPMEG00000009021	thrap3b	68	38.636	Poecilia_mexicana
MGP_PahariEiJ_G0028802	-	61	70.732	ENSPREG00000005816	thrap3a	59	63.636	Poecilia_reticulata
MGP_PahariEiJ_G0028802	-	77	56.757	ENSPREG00000009927	thrap3b	68	38.532	Poecilia_reticulata
MGP_PahariEiJ_G0028802	-	90	86.184	ENSPPYG00000001544	-	99	87.215	Pongo_abelii
MGP_PahariEiJ_G0028802	-	100	98.824	ENSPCAG00000008951	THRAP3	94	85.841	Procavia_capensis
MGP_PahariEiJ_G0028802	-	94	92.478	ENSPCOG00000027521	THRAP3	94	92.478	Propithecus_coquereli
MGP_PahariEiJ_G0028802	-	99	79.245	ENSPVAG00000008632	THRAP3	82	90.400	Pteropus_vampyrus
MGP_PahariEiJ_G0028802	-	77	56.757	ENSPNYG00000003062	thrap3b	53	60.714	Pundamilia_nyererei
MGP_PahariEiJ_G0028802	-	100	62.162	ENSPNYG00000013314	thrap3a	50	52.151	Pundamilia_nyererei
MGP_PahariEiJ_G0028802	-	92	34.216	ENSPNAG00000015136	thrap3a	71	34.018	Pygocentrus_nattereri
MGP_PahariEiJ_G0028802	-	50	39.706	ENSPNAG00000021161	zgc:112982	53	30.159	Pygocentrus_nattereri
MGP_PahariEiJ_G0028802	-	100	98.528	ENSRNOG00000009977	Thrap3	100	98.528	Rattus_norvegicus
MGP_PahariEiJ_G0028802	-	94	88.436	ENSRBIG00000031284	THRAP3	94	88.436	Rhinopithecus_bieti
MGP_PahariEiJ_G0028802	-	100	98.824	ENSRROG00000028592	THRAP3	94	92.035	Rhinopithecus_roxellana
MGP_PahariEiJ_G0028802	-	94	91.925	ENSSBOG00000029130	THRAP3	94	91.925	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0028802	-	100	95.238	ENSSHAG00000017932	THRAP3	94	82.541	Sarcophilus_harrisii
MGP_PahariEiJ_G0028802	-	82	58.865	ENSSFOG00015020057	thrap3	74	44.357	Scleropages_formosus
MGP_PahariEiJ_G0028802	-	61	60.241	ENSSDUG00000007054	thrap3b	68	40.271	Seriola_dumerili
MGP_PahariEiJ_G0028802	-	94	37.630	ENSSDUG00000010132	thrap3a	63	42.226	Seriola_dumerili
MGP_PahariEiJ_G0028802	-	61	60.241	ENSSLDG00000009210	thrap3b	68	40.271	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0028802	-	100	97.297	ENSSARG00000006424	THRAP3	94	90.919	Sorex_araneus
MGP_PahariEiJ_G0028802	-	100	89.286	ENSSPUG00000001120	THRAP3	94	75.991	Sphenodon_punctatus
MGP_PahariEiJ_G0028802	-	61	60.241	ENSSPAG00000009248	thrap3b	71	46.763	Stegastes_partitus
MGP_PahariEiJ_G0028802	-	100	97.297	ENSSSCG00000029954	THRAP3	94	92.137	Sus_scrofa
MGP_PahariEiJ_G0028802	-	100	90.588	ENSTGUG00000001606	THRAP3	94	79.934	Taeniopygia_guttata
MGP_PahariEiJ_G0028802	-	61	65.854	ENSTNIG00000012194	thrap3a	56	57.143	Tetraodon_nigroviridis
MGP_PahariEiJ_G0028802	-	100	79.630	ENSTBEG00000016264	THRAP3	66	100.000	Tupaia_belangeri
MGP_PahariEiJ_G0028802	-	100	97.297	ENSTTRG00000015101	THRAP3	94	92.137	Tursiops_truncatus
MGP_PahariEiJ_G0028802	-	100	97.297	ENSUAMG00000015685	THRAP3	94	91.916	Ursus_americanus
MGP_PahariEiJ_G0028802	-	100	97.297	ENSUMAG00000001744	THRAP3	94	91.916	Ursus_maritimus
MGP_PahariEiJ_G0028802	-	100	85.185	ENSVPAG00000004656	THRAP3	94	85.422	Vicugna_pacos
MGP_PahariEiJ_G0028802	-	100	97.297	ENSVVUG00000000118	THRAP3	94	92.027	Vulpes_vulpes
MGP_PahariEiJ_G0028802	-	100	32.301	ENSXETG00000033794	bclaf1	71	32.224	Xenopus_tropicalis
MGP_PahariEiJ_G0028802	-	94	60.241	ENSXETG00000003925	thrap3	94	57.705	Xenopus_tropicalis