EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0028878 (Gene tree)
Gene ID: 110323103
Gene Symbol: Zcchc17
Alias: 2810055E05Rik|HSPC251|Ps1d
Full Name: zinc finger CCHC-type containing 17
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 42408 bases
Position: chr6:81357284-81399691
Accession: 110323103
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0079825	S1	PF00575.23	3.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0079827	-	707	-	-	- (aa)	-	-
MGP_PahariEiJ_T0079826	-	742	-	-	- (aa)	-	-
MGP_PahariEiJ_T0079825	-	2152	-	MGP_PahariEiJ_P0079825	241 (aa)	XP_021055846	UPI000A30DF3F
MGP_PahariEiJ_T0079828	-	285	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0028878's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0028878's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0028878	Zcchc17	93	95.067	ENSG00000121766	ZCCHC17	99	96.552	Homo_sapiens
MGP_PahariEiJ_G0028878	Zcchc17	71	57.310	ENSAPOG00000021724	zcchc17	62	61.039	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0028878	Zcchc17	100	95.851	ENSAMEG00000017710	-	100	95.851	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0028878	Zcchc17	68	60.123	ENSACIG00000020915	zcchc17	95	60.284	Amphilophus_citrinellus
MGP_PahariEiJ_G0028878	Zcchc17	71	57.310	ENSAOCG00000003880	zcchc17	62	61.039	Amphiprion_ocellaris
MGP_PahariEiJ_G0028878	Zcchc17	71	57.310	ENSAPEG00000014460	zcchc17	63	61.039	Amphiprion_percula
MGP_PahariEiJ_G0028878	Zcchc17	65	59.236	ENSATEG00000015942	zcchc17	64	59.494	Anabas_testudineus
MGP_PahariEiJ_G0028878	Zcchc17	64	75.974	ENSACAG00000000389	ZCCHC17	66	76.433	Anolis_carolinensis
MGP_PahariEiJ_G0028878	Zcchc17	93	94.170	ENSANAG00000024208	ZCCHC17	99	96.552	Aotus_nancymaae
MGP_PahariEiJ_G0028878	Zcchc17	66	61.250	ENSACLG00000019174	zcchc17	62	61.688	Astatotilapia_calliptera
MGP_PahariEiJ_G0028878	Zcchc17	67	67.284	ENSAMXG00000020595	zcchc17	68	66.242	Astyanax_mexicanus
MGP_PahariEiJ_G0028878	Zcchc17	93	90.583	ENSBTAG00000001432	-	95	90.265	Bos_taurus
MGP_PahariEiJ_G0028878	Zcchc17	93	95.067	ENSBTAG00000016818	ZCCHC17	94	94.690	Bos_taurus
MGP_PahariEiJ_G0028878	Zcchc17	93	91.928	ENSCJAG00000045207	-	94	91.593	Callithrix_jacchus
MGP_PahariEiJ_G0028878	Zcchc17	93	93.722	ENSCJAG00000006259	ZCCHC17	99	95.862	Callithrix_jacchus
MGP_PahariEiJ_G0028878	Zcchc17	100	95.436	ENSCAFG00000011131	-	100	95.436	Canis_familiaris
MGP_PahariEiJ_G0028878	Zcchc17	93	87.556	ENSCAFG00000001857	-	93	90.667	Canis_familiaris
MGP_PahariEiJ_G0028878	Zcchc17	83	84.091	ENSCAFG00020024828	ZCCHC17	89	99.286	Canis_lupus_dingo
MGP_PahariEiJ_G0028878	Zcchc17	61	88.435	ENSCAFG00020016032	-	92	88.435	Canis_lupus_dingo
MGP_PahariEiJ_G0028878	Zcchc17	93	95.067	ENSCHIG00000015629	-	94	94.690	Capra_hircus
MGP_PahariEiJ_G0028878	Zcchc17	93	89.238	ENSTSYG00000000490	-	99	96.552	Carlito_syrichta
MGP_PahariEiJ_G0028878	Zcchc17	78	94.149	ENSCAPG00000006774	ZCCHC17	84	93.989	Cavia_aperea
MGP_PahariEiJ_G0028878	Zcchc17	76	95.082	ENSCPOG00000022394	-	89	95.082	Cavia_porcellus
MGP_PahariEiJ_G0028878	Zcchc17	93	94.619	ENSCPOG00000000106	ZCCHC17	94	94.248	Cavia_porcellus
MGP_PahariEiJ_G0028878	Zcchc17	93	94.170	ENSCCAG00000033666	ZCCHC17	99	96.552	Cebus_capucinus
MGP_PahariEiJ_G0028878	Zcchc17	93	94.619	ENSCATG00000044586	ZCCHC17	99	96.552	Cercocebus_atys
MGP_PahariEiJ_G0028878	Zcchc17	100	95.436	ENSCLAG00000008794	ZCCHC17	100	95.436	Chinchilla_lanigera
MGP_PahariEiJ_G0028878	Zcchc17	93	95.067	ENSCSAG00000001032	ZCCHC17	94	94.690	Chlorocebus_sabaeus
MGP_PahariEiJ_G0028878	Zcchc17	93	73.778	ENSCHOG00000001581	ZCCHC17	94	79.204	Choloepus_hoffmanni
MGP_PahariEiJ_G0028878	Zcchc17	93	94.170	ENSCANG00000038509	ZCCHC17	99	96.552	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0028878	Zcchc17	100	96.281	ENSCGRG00001014387	Zcchc17	100	96.281	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0028878	Zcchc17	100	96.281	ENSCGRG00000013323	Zcchc17	100	96.281	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0028878	Zcchc17	69	60.843	ENSCSEG00000016039	zcchc17	92	64.539	Cynoglossus_semilaevis
MGP_PahariEiJ_G0028878	Zcchc17	66	62.500	ENSCVAG00000007112	zcchc17	62	62.987	Cyprinodon_variegatus
MGP_PahariEiJ_G0028878	Zcchc17	63	68.212	ENSDARG00000018936	zcchc17	65	68.182	Danio_rerio
MGP_PahariEiJ_G0028878	Zcchc17	94	94.690	ENSDNOG00000000509	-	93	95.111	Dasypus_novemcinctus
MGP_PahariEiJ_G0028878	Zcchc17	58	99.286	ENSDORG00000004128	Zcchc17	92	99.286	Dipodomys_ordii
MGP_PahariEiJ_G0028878	Zcchc17	93	94.619	ENSETEG00000007421	ZCCHC17	94	93.363	Echinops_telfairi
MGP_PahariEiJ_G0028878	Zcchc17	93	95.067	ENSEASG00005010819	ZCCHC17	94	94.690	Equus_asinus_asinus
MGP_PahariEiJ_G0028878	Zcchc17	93	95.067	ENSECAG00000025040	ZCCHC17	82	94.690	Equus_caballus
MGP_PahariEiJ_G0028878	Zcchc17	94	91.150	ENSEEUG00000014855	ZCCHC17	94	91.150	Erinaceus_europaeus
MGP_PahariEiJ_G0028878	Zcchc17	90	53.636	ENSELUG00000002450	zcchc17	64	68.874	Esox_lucius
MGP_PahariEiJ_G0028878	Zcchc17	100	96.277	ENSFCAG00000004196	ZCCHC17	99	96.552	Felis_catus
MGP_PahariEiJ_G0028878	Zcchc17	65	83.439	ENSFALG00000001165	ZCCHC17	64	84.076	Ficedula_albicollis
MGP_PahariEiJ_G0028878	Zcchc17	93	93.274	ENSFDAG00000016520	ZCCHC17	94	92.920	Fukomys_damarensis
MGP_PahariEiJ_G0028878	Zcchc17	63	58.824	ENSFHEG00000007848	zcchc17	63	59.091	Fundulus_heteroclitus
MGP_PahariEiJ_G0028878	Zcchc17	64	60.000	ENSGMOG00000010452	zcchc17	61	60.390	Gadus_morhua
MGP_PahariEiJ_G0028878	Zcchc17	63	84.106	ENSGALG00000000618	ZCCHC17	63	84.106	Gallus_gallus
MGP_PahariEiJ_G0028878	Zcchc17	64	59.740	ENSGAFG00000015591	zcchc17	63	59.740	Gambusia_affinis
MGP_PahariEiJ_G0028878	Zcchc17	66	60.625	ENSGACG00000005616	zcchc17	60	61.688	Gasterosteus_aculeatus
MGP_PahariEiJ_G0028878	Zcchc17	69	82.530	ENSGAGG00000019515	ZCCHC17	65	83.648	Gopherus_agassizii
MGP_PahariEiJ_G0028878	Zcchc17	93	95.067	ENSGGOG00000009126	ZCCHC17	99	96.552	Gorilla_gorilla
MGP_PahariEiJ_G0028878	Zcchc17	66	61.250	ENSHBUG00000018638	zcchc17	62	61.688	Haplochromis_burtoni
MGP_PahariEiJ_G0028878	Zcchc17	93	69.955	ENSHGLG00000014866	-	93	70.222	Heterocephalus_glaber_female
MGP_PahariEiJ_G0028878	Zcchc17	93	82.222	ENSHGLG00000005931	-	93	82.667	Heterocephalus_glaber_female
MGP_PahariEiJ_G0028878	Zcchc17	93	94.170	ENSHGLG00000019323	ZCCHC17	94	93.805	Heterocephalus_glaber_female
MGP_PahariEiJ_G0028878	Zcchc17	93	87.444	ENSHGLG00100019907	-	94	87.168	Heterocephalus_glaber_male
MGP_PahariEiJ_G0028878	Zcchc17	83	85.116	ENSHGLG00100014521	ZCCHC17	92	98.571	Heterocephalus_glaber_male
MGP_PahariEiJ_G0028878	Zcchc17	76	89.071	ENSHGLG00100009772	-	82	89.071	Heterocephalus_glaber_male
MGP_PahariEiJ_G0028878	Zcchc17	93	69.955	ENSHGLG00100000976	-	93	70.222	Heterocephalus_glaber_male
MGP_PahariEiJ_G0028878	Zcchc17	65	61.538	ENSHCOG00000005075	zcchc17	62	61.688	Hippocampus_comes
MGP_PahariEiJ_G0028878	Zcchc17	89	59.070	ENSIPUG00000020511	zcchc17	68	67.089	Ictalurus_punctatus
MGP_PahariEiJ_G0028878	Zcchc17	93	93.274	ENSSTOG00000003825	ZCCHC17	94	92.920	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0028878	Zcchc17	69	57.831	ENSKMAG00000003662	zcchc17	64	59.494	Kryptolebias_marmoratus
MGP_PahariEiJ_G0028878	Zcchc17	66	60.759	ENSLBEG00000002644	zcchc17	63	60.510	Labrus_bergylta
MGP_PahariEiJ_G0028878	Zcchc17	72	65.318	ENSLACG00000016945	ZCCHC17	65	71.053	Latimeria_chalumnae
MGP_PahariEiJ_G0028878	Zcchc17	63	77.483	ENSLOCG00000005280	zcchc17	58	77.483	Lepisosteus_oculatus
MGP_PahariEiJ_G0028878	Zcchc17	93	85.463	ENSLAFG00000015364	ZCCHC17	94	92.609	Loxodonta_africana
MGP_PahariEiJ_G0028878	Zcchc17	93	94.619	ENSMFAG00000039045	ZCCHC17	99	96.552	Macaca_fascicularis
MGP_PahariEiJ_G0028878	Zcchc17	93	94.619	ENSMMUG00000012156	ZCCHC17	99	96.552	Macaca_mulatta
MGP_PahariEiJ_G0028878	Zcchc17	93	94.619	ENSMNEG00000032021	ZCCHC17	99	96.552	Macaca_nemestrina
MGP_PahariEiJ_G0028878	Zcchc17	93	94.619	ENSMLEG00000040817	ZCCHC17	99	96.552	Mandrillus_leucophaeus
MGP_PahariEiJ_G0028878	Zcchc17	97	49.793	ENSMAMG00000011701	zcchc17	97	51.452	Mastacembelus_armatus
MGP_PahariEiJ_G0028878	Zcchc17	66	61.250	ENSMZEG00005005784	zcchc17	62	61.688	Maylandia_zebra
MGP_PahariEiJ_G0028878	Zcchc17	63	83.553	ENSMGAG00000000777	ZCCHC17	61	84.106	Meleagris_gallopavo
MGP_PahariEiJ_G0028878	Zcchc17	77	90.323	ENSMAUG00000005269	Zcchc17	72	98.137	Mesocricetus_auratus
MGP_PahariEiJ_G0028878	Zcchc17	100	95.436	ENSMICG00000009354	-	99	96.552	Microcebus_murinus
MGP_PahariEiJ_G0028878	Zcchc17	93	85.202	ENSMICG00000028289	-	94	85.333	Microcebus_murinus
MGP_PahariEiJ_G0028878	Zcchc17	97	66.667	ENSMICG00000027526	-	68	83.444	Microcebus_murinus
MGP_PahariEiJ_G0028878	Zcchc17	100	97.095	ENSMOCG00000014937	Zcchc17	100	97.095	Microtus_ochrogaster
MGP_PahariEiJ_G0028878	Zcchc17	59	59.859	ENSMMOG00000019813	zcchc17	67	57.143	Mola_mola
MGP_PahariEiJ_G0028878	Zcchc17	63	75.497	ENSMODG00000025345	-	72	75.497	Monodelphis_domestica
MGP_PahariEiJ_G0028878	Zcchc17	66	80.503	ENSMODG00000020372	-	85	80.503	Monodelphis_domestica
MGP_PahariEiJ_G0028878	Zcchc17	66	86.792	ENSMODG00000017082	-	65	86.792	Monodelphis_domestica
MGP_PahariEiJ_G0028878	Zcchc17	67	61.111	ENSMALG00000016295	zcchc17	65	62.338	Monopterus_albus
MGP_PahariEiJ_G0028878	Zcchc17	100	99.585	MGP_CAROLIEiJ_G0026546	Zcchc17	100	99.585	Mus_caroli
MGP_PahariEiJ_G0028878	Zcchc17	100	99.585	ENSMUSG00000028772	Zcchc17	100	99.585	Mus_musculus
MGP_PahariEiJ_G0028878	Zcchc17	100	99.170	MGP_SPRETEiJ_G0027526	Zcchc17	100	99.170	Mus_spretus
MGP_PahariEiJ_G0028878	Zcchc17	93	88.789	ENSMPUG00000015442	ZCCHC17	94	88.496	Mustela_putorius_furo
MGP_PahariEiJ_G0028878	Zcchc17	93	88.789	ENSMLUG00000000594	ZCCHC17	94	93.805	Myotis_lucifugus
MGP_PahariEiJ_G0028878	Zcchc17	93	92.411	ENSNGAG00000022689	Zcchc17	94	93.392	Nannospalax_galili
MGP_PahariEiJ_G0028878	Zcchc17	93	88.789	ENSNLEG00000001493	ZCCHC17	99	96.552	Nomascus_leucogenys
MGP_PahariEiJ_G0028878	Zcchc17	82	92.386	ENSOPRG00000014449	ZCCHC17	100	92.386	Ochotona_princeps
MGP_PahariEiJ_G0028878	Zcchc17	93	95.067	ENSODEG00000003683	ZCCHC17	94	94.690	Octodon_degus
MGP_PahariEiJ_G0028878	Zcchc17	67	60.494	ENSONIG00000002308	zcchc17	62	61.688	Oreochromis_niloticus
MGP_PahariEiJ_G0028878	Zcchc17	94	81.858	ENSOCUG00000027238	-	93	81.333	Oryctolagus_cuniculus
MGP_PahariEiJ_G0028878	Zcchc17	100	82.812	ENSOCUG00000014599	-	73	82.812	Oryctolagus_cuniculus
MGP_PahariEiJ_G0028878	Zcchc17	69	58.434	ENSORLG00000011563	zcchc17	71	59.494	Oryzias_latipes
MGP_PahariEiJ_G0028878	Zcchc17	69	58.434	ENSORLG00020019636	zcchc17	75	59.494	Oryzias_latipes_hni
MGP_PahariEiJ_G0028878	Zcchc17	69	58.434	ENSORLG00015011437	zcchc17	65	59.494	Oryzias_latipes_hsok
MGP_PahariEiJ_G0028878	Zcchc17	68	59.756	ENSOMEG00000009464	zcchc17	64	60.127	Oryzias_melastigma
MGP_PahariEiJ_G0028878	Zcchc17	91	93.151	ENSOGAG00000013749	ZCCHC17	94	92.920	Otolemur_garnettii
MGP_PahariEiJ_G0028878	Zcchc17	93	94.643	ENSOARG00000001618	-	94	94.273	Ovis_aries
MGP_PahariEiJ_G0028878	Zcchc17	93	94.619	ENSPPAG00000030937	ZCCHC17	99	96.552	Pan_paniscus
MGP_PahariEiJ_G0028878	Zcchc17	100	95.436	ENSPPRG00000003044	ZCCHC17	99	96.552	Panthera_pardus
MGP_PahariEiJ_G0028878	Zcchc17	93	95.516	ENSPTIG00000010650	ZCCHC17	99	96.552	Panthera_tigris_altaica
MGP_PahariEiJ_G0028878	Zcchc17	93	95.067	ENSPTRG00000000456	ZCCHC17	99	96.552	Pan_troglodytes
MGP_PahariEiJ_G0028878	Zcchc17	93	94.619	ENSPANG00000016167	ZCCHC17	99	96.552	Papio_anubis
MGP_PahariEiJ_G0028878	Zcchc17	62	70.000	ENSPKIG00000010742	zcchc17	60	70.199	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0028878	Zcchc17	71	81.287	ENSPSIG00000007187	ZCCHC17	74	78.142	Pelodiscus_sinensis
MGP_PahariEiJ_G0028878	Zcchc17	66	60.000	ENSPMGG00000005830	zcchc17	63	60.390	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0028878	Zcchc17	100	96.266	ENSPEMG00000015853	-	100	96.266	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0028878	Zcchc17	66	83.019	ENSPCIG00000014143	-	95	74.459	Phascolarctos_cinereus
MGP_PahariEiJ_G0028878	Zcchc17	66	59.494	ENSPFOG00000007896	zcchc17	65	59.740	Poecilia_formosa
MGP_PahariEiJ_G0028878	Zcchc17	66	59.494	ENSPLAG00000007114	zcchc17	62	59.740	Poecilia_latipinna
MGP_PahariEiJ_G0028878	Zcchc17	66	59.494	ENSPMEG00000014567	zcchc17	62	59.740	Poecilia_mexicana
MGP_PahariEiJ_G0028878	Zcchc17	64	59.740	ENSPREG00000005325	zcchc17	50	59.740	Poecilia_reticulata
MGP_PahariEiJ_G0028878	Zcchc17	93	93.722	ENSPPYG00000001617	-	79	93.778	Pongo_abelii
MGP_PahariEiJ_G0028878	Zcchc17	93	88.789	ENSPCAG00000011665	ZCCHC17	94	89.381	Procavia_capensis
MGP_PahariEiJ_G0028878	Zcchc17	100	95.436	ENSPCOG00000024007	ZCCHC17	99	96.552	Propithecus_coquereli
MGP_PahariEiJ_G0028878	Zcchc17	93	95.516	ENSPVAG00000014747	ZCCHC17	94	95.133	Pteropus_vampyrus
MGP_PahariEiJ_G0028878	Zcchc17	66	61.250	ENSPNYG00000009648	zcchc17	95	61.765	Pundamilia_nyererei
MGP_PahariEiJ_G0028878	Zcchc17	89	60.748	ENSPNAG00000026780	zcchc17	66	70.130	Pygocentrus_nattereri
MGP_PahariEiJ_G0028878	Zcchc17	100	97.095	ENSRNOG00000012266	Zcchc17	100	97.095	Rattus_norvegicus
MGP_PahariEiJ_G0028878	Zcchc17	93	94.619	ENSRBIG00000033939	ZCCHC17	99	96.552	Rhinopithecus_bieti
MGP_PahariEiJ_G0028878	Zcchc17	93	94.619	ENSRROG00000028866	ZCCHC17	99	96.552	Rhinopithecus_roxellana
MGP_PahariEiJ_G0028878	Zcchc17	93	94.619	ENSSBOG00000029249	ZCCHC17	99	96.552	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0028878	Zcchc17	66	85.535	ENSSHAG00000008748	ZCCHC17	95	73.362	Sarcophilus_harrisii
MGP_PahariEiJ_G0028878	Zcchc17	91	59.817	ENSSFOG00015021334	zcchc17	59	73.684	Scleropages_formosus
MGP_PahariEiJ_G0028878	Zcchc17	68	60.123	ENSSMAG00000010817	zcchc17	60	60.510	Scophthalmus_maximus
MGP_PahariEiJ_G0028878	Zcchc17	66	60.625	ENSSDUG00000009095	zcchc17	61	61.039	Seriola_dumerili
MGP_PahariEiJ_G0028878	Zcchc17	79	53.927	ENSSLDG00000009837	zcchc17	75	60.127	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0028878	Zcchc17	68	81.098	ENSSPUG00000006912	ZCCHC17	62	81.132	Sphenodon_punctatus
MGP_PahariEiJ_G0028878	Zcchc17	63	60.131	ENSSPAG00000016785	zcchc17	61	60.390	Stegastes_partitus
MGP_PahariEiJ_G0028878	Zcchc17	93	94.619	ENSSSCG00000031639	ZCCHC17	94	94.248	Sus_scrofa
MGP_PahariEiJ_G0028878	Zcchc17	57	78.986	ENSTGUG00000000817	ZCCHC17	62	78.986	Taeniopygia_guttata
MGP_PahariEiJ_G0028878	Zcchc17	72	58.960	ENSTRUG00000013252	zcchc17	63	62.338	Takifugu_rubripes
MGP_PahariEiJ_G0028878	Zcchc17	67	58.642	ENSTNIG00000016980	zcchc17	65	59.740	Tetraodon_nigroviridis
MGP_PahariEiJ_G0028878	Zcchc17	93	95.964	ENSTTRG00000014870	ZCCHC17	94	95.575	Tursiops_truncatus
MGP_PahariEiJ_G0028878	Zcchc17	78	96.809	ENSUAMG00000018258	ZCCHC17	96	96.809	Ursus_americanus
MGP_PahariEiJ_G0028878	Zcchc17	100	95.851	ENSUMAG00000009188	-	100	95.851	Ursus_maritimus
MGP_PahariEiJ_G0028878	Zcchc17	100	94.606	ENSVPAG00000003834	ZCCHC17	100	94.606	Vicugna_pacos
MGP_PahariEiJ_G0028878	Zcchc17	65	80.769	ENSXETG00000012917	zcchc17	86	80.795	Xenopus_tropicalis
MGP_PahariEiJ_G0028878	Zcchc17	71	55.556	ENSXCOG00000020147	zcchc17	70	55.556	Xiphophorus_couchianus
MGP_PahariEiJ_G0028878	Zcchc17	71	55.556	ENSXMAG00000002980	zcchc17	70	55.556	Xiphophorus_maculatus