EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
MGP_PahariEiJ_G0028881 (Gene tree)
Gene ID
110323936
Gene Symbol
Pum1
Alias
Pumm
Full Name
pumilio RNA binding family member 1
Gene Type
protein_coding
Species
Mus_pahari
Status
putative
Strand
Plus strand
Length
117463 bases
Position
chr6:81541794-81659256
Accession
110323936
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_PahariEiJ_P0079836PUFPF00806.193.1e-7018
MGP_PahariEiJ_P0079836PUFPF00806.193.1e-7028
MGP_PahariEiJ_P0079836PUFPF00806.193.1e-7038
MGP_PahariEiJ_P0079836PUFPF00806.193.1e-7048
MGP_PahariEiJ_P0079836PUFPF00806.193.1e-7058
MGP_PahariEiJ_P0079836PUFPF00806.193.1e-7068
MGP_PahariEiJ_P0079836PUFPF00806.193.1e-7078
MGP_PahariEiJ_P0079836PUFPF00806.193.1e-7088
MGP_PahariEiJ_P0079840PUFPF00806.192.3e-6918
MGP_PahariEiJ_P0079840PUFPF00806.192.3e-6928
MGP_PahariEiJ_P0079840PUFPF00806.192.3e-6938
MGP_PahariEiJ_P0079840PUFPF00806.192.3e-6948
MGP_PahariEiJ_P0079840PUFPF00806.192.3e-6958
MGP_PahariEiJ_P0079840PUFPF00806.192.3e-6968
MGP_PahariEiJ_P0079840PUFPF00806.192.3e-6978
MGP_PahariEiJ_P0079840PUFPF00806.192.3e-6988
MGP_PahariEiJ_P0079837PUFPF00806.192.7e-6918
MGP_PahariEiJ_P0079837PUFPF00806.192.7e-6928
MGP_PahariEiJ_P0079837PUFPF00806.192.7e-6938
MGP_PahariEiJ_P0079837PUFPF00806.192.7e-6948
MGP_PahariEiJ_P0079837PUFPF00806.192.7e-6958
MGP_PahariEiJ_P0079837PUFPF00806.192.7e-6968
MGP_PahariEiJ_P0079837PUFPF00806.192.7e-6978
MGP_PahariEiJ_P0079837PUFPF00806.192.7e-6988
MGP_PahariEiJ_P0079841PUFPF00806.195.6e-6918
MGP_PahariEiJ_P0079841PUFPF00806.195.6e-6928
MGP_PahariEiJ_P0079841PUFPF00806.195.6e-6938
MGP_PahariEiJ_P0079841PUFPF00806.195.6e-6948
MGP_PahariEiJ_P0079841PUFPF00806.195.6e-6958
MGP_PahariEiJ_P0079841PUFPF00806.195.6e-6968
MGP_PahariEiJ_P0079841PUFPF00806.195.6e-6978
MGP_PahariEiJ_P0079841PUFPF00806.195.6e-6988
MGP_PahariEiJ_P0079835PUFPF00806.195.7e-6918
MGP_PahariEiJ_P0079835PUFPF00806.195.7e-6928
MGP_PahariEiJ_P0079835PUFPF00806.195.7e-6938
MGP_PahariEiJ_P0079835PUFPF00806.195.7e-6948
MGP_PahariEiJ_P0079835PUFPF00806.195.7e-6958
MGP_PahariEiJ_P0079835PUFPF00806.195.7e-6968
MGP_PahariEiJ_P0079835PUFPF00806.195.7e-6978
MGP_PahariEiJ_P0079835PUFPF00806.195.7e-6988
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_PahariEiJ_T0079841-3993XM_021201306MGP_PahariEiJ_P00798411188 (aa)XP_021056963UPI000A3047B0
MGP_PahariEiJ_T0079840-4020-MGP_PahariEiJ_P00798401186 (aa)XP_021056964UPI000A308BE0
MGP_PahariEiJ_T0079838-1263--- (aa)--
MGP_PahariEiJ_T0079839-693-MGP_PahariEiJ_P0079839218 (aa)-UPI00015F3BCD
MGP_PahariEiJ_T0079835-5434-MGP_PahariEiJ_P00798351189 (aa)XP_021056961UPI000A30BDBA
MGP_PahariEiJ_T0079836-4659-MGP_PahariEiJ_P0079836944 (aa)-UPI0000D8B755
MGP_PahariEiJ_T0079837-5103-MGP_PahariEiJ_P00798371092 (aa)--
Gene Model
Click here to download MGP_PahariEiJ_G0028881's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0028881's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_PahariEiJ_G0028881Pum18687.294MGP_PahariEiJ_G0029361Pum210088.835
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_PahariEiJ_G0028881Pum110099.306ENSG00000134644PUM1100100.000Homo_sapiens
MGP_PahariEiJ_G0028881Pum19091.768ENSAPOG00000021632pum110091.283Acanthochromis_polyacanthus
MGP_PahariEiJ_G0028881Pum110099.306ENSAMEG00000017656PUM19798.571Ailuropoda_melanoleuca
MGP_PahariEiJ_G0028881Pum110080.817ENSACIG00000021013pum110075.414Amphilophus_citrinellus
MGP_PahariEiJ_G0028881Pum19091.768ENSAOCG00000003944pum110091.283Amphiprion_ocellaris
MGP_PahariEiJ_G0028881Pum19091.768ENSAPEG00000014550pum110091.283Amphiprion_percula
MGP_PahariEiJ_G0028881Pum19091.768ENSATEG00000016004pum110091.283Anabas_testudineus
MGP_PahariEiJ_G0028881Pum110097.015ENSAPLG00000009351PUM110096.804Anas_platyrhynchos
MGP_PahariEiJ_G0028881Pum110095.268ENSACAG00000000682PUM19894.949Anolis_carolinensis
MGP_PahariEiJ_G0028881Pum110099.306ENSANAG00000027865PUM110099.306Aotus_nancymaae
MGP_PahariEiJ_G0028881Pum19076.274ENSACLG00000019354pum110077.706Astatotilapia_calliptera
MGP_PahariEiJ_G0028881Pum110083.747ENSAMXG00000020607pum19678.261Astyanax_mexicanus
MGP_PahariEiJ_G0028881Pum110099.306ENSBTAG00000018979PUM110099.306Bos_taurus
MGP_PahariEiJ_G0028881Pum110099.306ENSCJAG00000006035PUM110099.515Callithrix_jacchus
MGP_PahariEiJ_G0028881Pum110099.306ENSCAFG00000011205PUM110096.384Canis_familiaris
MGP_PahariEiJ_G0028881Pum19296.542ENSCAFG00020024616PUM19899.272Canis_lupus_dingo
MGP_PahariEiJ_G0028881Pum110099.306ENSCHIG00000012952PUM110099.272Capra_hircus
MGP_PahariEiJ_G0028881Pum110098.611ENSTSYG00000008868PUM110098.611Carlito_syrichta
MGP_PahariEiJ_G0028881Pum110098.835ENSCPOG00000031613PUM110098.835Cavia_porcellus
MGP_PahariEiJ_G0028881Pum110099.306ENSCATG00000017991PUM110099.517Cercocebus_atys
MGP_PahariEiJ_G0028881Pum110098.907ENSCLAG00000007662PUM1100100.000Chinchilla_lanigera
MGP_PahariEiJ_G0028881Pum110099.306ENSCSAG00000001028PUM110097.917Chlorocebus_sabaeus
MGP_PahariEiJ_G0028881Pum19299.306ENSCHOG00000010245PUM19395.827Choloepus_hoffmanni
MGP_PahariEiJ_G0028881Pum110096.928ENSCPBG00000009288PUM110098.058Chrysemys_picta_bellii
MGP_PahariEiJ_G0028881Pum110099.306ENSCANG00000042606PUM110099.515Colobus_angolensis_palliatus
MGP_PahariEiJ_G0028881Pum1100100.000ENSCGRG00001024949Pum1100100.000Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0028881Pum1100100.000ENSCGRG00000014197Pum1100100.000Cricetulus_griseus_crigri
MGP_PahariEiJ_G0028881Pum19075.696ENSCSEG00000015981pum110077.016Cynoglossus_semilaevis
MGP_PahariEiJ_G0028881Pum110080.322ENSCVAG00000007043pum110074.628Cyprinodon_variegatus
MGP_PahariEiJ_G0028881Pum110084.367ENSDARG00000099256pum110078.846Danio_rerio
MGP_PahariEiJ_G0028881Pum110099.306ENSDNOG00000010939PUM110098.234Dasypus_novemcinctus
MGP_PahariEiJ_G0028881Pum190100.000ENSDORG00000001875Pum1100100.000Dipodomys_ordii
MGP_PahariEiJ_G0028881Pum185100.000ENSETEG00000004355PUM18792.871Echinops_telfairi
MGP_PahariEiJ_G0028881Pum110099.306ENSEASG00005010813PUM110098.401Equus_asinus_asinus
MGP_PahariEiJ_G0028881Pum110098.611ENSECAG00000021369PUM110098.318Equus_caballus
MGP_PahariEiJ_G0028881Pum18099.306ENSEEUG00000003871PUM17499.322Erinaceus_europaeus
MGP_PahariEiJ_G0028881Pum110082.987ENSELUG00000002409pum110083.127Esox_lucius
MGP_PahariEiJ_G0028881Pum110099.306ENSFCAG00000010374PUM110099.306Felis_catus
MGP_PahariEiJ_G0028881Pum110095.921ENSFALG00000001214PUM19794.640Ficedula_albicollis
MGP_PahariEiJ_G0028881Pum110098.654ENSFDAG00000011319PUM110098.654Fukomys_damarensis
MGP_PahariEiJ_G0028881Pum17087.643ENSGMOG00000010491pum110074.092Gadus_morhua
MGP_PahariEiJ_G0028881Pum110097.139ENSGALG00000042598PUM110096.981Gallus_gallus
MGP_PahariEiJ_G0028881Pum110080.446ENSGAFG00000015617pum110090.557Gambusia_affinis
MGP_PahariEiJ_G0028881Pum110080.542ENSGACG00000005717pum110075.206Gasterosteus_aculeatus
MGP_PahariEiJ_G0028881Pum110096.642ENSGAGG00000001290PUM110096.552Gopherus_agassizii
MGP_PahariEiJ_G0028881Pum110099.306ENSGGOG00000011983PUM110099.515Gorilla_gorilla
MGP_PahariEiJ_G0028881Pum110080.569ENSHBUG00000018718pum110075.207Haplochromis_burtoni
MGP_PahariEiJ_G0028881Pum110098.486ENSHGLG00000013819Pum110098.486Heterocephalus_glaber_female
MGP_PahariEiJ_G0028881Pum110098.486ENSHGLG00100008621Pum110098.486Heterocephalus_glaber_male
MGP_PahariEiJ_G0028881Pum19074.537ENSHCOG00000005149pum110074.376Hippocampus_comes
MGP_PahariEiJ_G0028881Pum110082.143ENSIPUG00000020421pum110077.224Ictalurus_punctatus
MGP_PahariEiJ_G0028881Pum110099.306ENSSTOG00000010757PUM110099.306Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0028881Pum110099.306ENSJJAG00000000530Pum110099.306Jaculus_jaculus
MGP_PahariEiJ_G0028881Pum110079.950ENSKMAG00000003481pum110074.793Kryptolebias_marmoratus
MGP_PahariEiJ_G0028881Pum110079.926ENSLBEG00000002527pum110075.394Labrus_bergylta
MGP_PahariEiJ_G0028881Pum110088.104ENSLACG00000017188PUM19986.178Latimeria_chalumnae
MGP_PahariEiJ_G0028881Pum110091.056ENSLOCG00000005210pum19987.813Lepisosteus_oculatus
MGP_PahariEiJ_G0028881Pum110097.981ENSLAFG00000003178PUM110097.981Loxodonta_africana
MGP_PahariEiJ_G0028881Pum110099.306ENSMFAG00000010291PUM110099.517Macaca_fascicularis
MGP_PahariEiJ_G0028881Pum110099.306ENSMMUG00000013520PUM110099.515Macaca_mulatta
MGP_PahariEiJ_G0028881Pum110099.306ENSMNEG00000034639PUM110099.515Macaca_nemestrina
MGP_PahariEiJ_G0028881Pum110099.306ENSMLEG00000038743PUM110099.515Mandrillus_leucophaeus
MGP_PahariEiJ_G0028881Pum110080.569ENSMAMG00000011606pum110075.289Mastacembelus_armatus
MGP_PahariEiJ_G0028881Pum110080.569ENSMZEG00005005834pum110075.207Maylandia_zebra
MGP_PahariEiJ_G0028881Pum110096.766ENSMGAG00000000724PUM110096.720Meleagris_gallopavo
MGP_PahariEiJ_G0028881Pum1100100.000ENSMAUG00000022090Pum1100100.000Mesocricetus_auratus
MGP_PahariEiJ_G0028881Pum110098.654ENSMICG00000007713-10099.272Microcebus_murinus
MGP_PahariEiJ_G0028881Pum19997.183ENSMICG00000012213-10095.874Microcebus_murinus
MGP_PahariEiJ_G0028881Pum110099.306ENSMOCG00000015463Pum110099.306Microtus_ochrogaster
MGP_PahariEiJ_G0028881Pum19088.453ENSMMOG00000019817pum110091.041Mola_mola
MGP_PahariEiJ_G0028881Pum110096.975ENSMODG00000017067PUM110096.975Monodelphis_domestica
MGP_PahariEiJ_G0028881Pum19088.684ENSMALG00000016399pum110091.283Monopterus_albus
MGP_PahariEiJ_G0028881Pum110099.817MGP_CAROLIEiJ_G0026549Pum110099.817Mus_caroli
MGP_PahariEiJ_G0028881Pum1100100.000ENSMUSG00000028580Pum1100100.000Mus_musculus
MGP_PahariEiJ_G0028881Pum1100100.000MGP_SPRETEiJ_G0027529Pum1100100.000Mus_spretus
MGP_PahariEiJ_G0028881Pum110099.306ENSMPUG00000015454PUM110098.316Mustela_putorius_furo
MGP_PahariEiJ_G0028881Pum110099.306ENSMLUG00000006490PUM110098.315Myotis_lucifugus
MGP_PahariEiJ_G0028881Pum110098.941ENSNGAG00000002378Pum110099.001Nannospalax_galili
MGP_PahariEiJ_G0028881Pum110078.033ENSNBRG00000010689pum110082.797Neolamprologus_brichardi
MGP_PahariEiJ_G0028881Pum110098.611ENSNLEG00000001151PUM110098.611Nomascus_leucogenys
MGP_PahariEiJ_G0028881Pum18496.284ENSMEUG00000000976-8296.284Notamacropus_eugenii
MGP_PahariEiJ_G0028881Pum184100.000ENSOPRG00000001776PUM173100.000Ochotona_princeps
MGP_PahariEiJ_G0028881Pum110098.737ENSODEG00000003465PUM110098.737Octodon_degus
MGP_PahariEiJ_G0028881Pum110081.127ENSONIG00000002290pum110075.537Oreochromis_niloticus
MGP_PahariEiJ_G0028881Pum18177.254ENSOANG00000004902-10077.254Ornithorhynchus_anatinus
MGP_PahariEiJ_G0028881Pum110099.306ENSOCUG00000008641PUM19998.399Oryctolagus_cuniculus
MGP_PahariEiJ_G0028881Pum110081.436ENSORLG00000011482pum110075.535Oryzias_latipes
MGP_PahariEiJ_G0028881Pum110081.559ENSORLG00020019461pum110075.535Oryzias_latipes_hni
MGP_PahariEiJ_G0028881Pum110081.559ENSORLG00015011375pum110075.618Oryzias_latipes_hsok
MGP_PahariEiJ_G0028881Pum19092.978ENSOMEG00000009312pum110090.557Oryzias_melastigma
MGP_PahariEiJ_G0028881Pum110098.611ENSOGAG00000011063PUM110095.802Otolemur_garnettii
MGP_PahariEiJ_G0028881Pum110099.306ENSOARG00000001899PUM110099.272Ovis_aries
MGP_PahariEiJ_G0028881Pum110099.306ENSPPAG00000044003PUM110099.515Pan_paniscus
MGP_PahariEiJ_G0028881Pum110099.306ENSPPRG00000001370PUM110099.306Panthera_pardus
MGP_PahariEiJ_G0028881Pum110099.306ENSPTIG00000010798PUM110099.306Panthera_tigris_altaica
MGP_PahariEiJ_G0028881Pum110099.306ENSPTRG00000000453PUM110099.515Pan_troglodytes
MGP_PahariEiJ_G0028881Pum110099.306ENSPANG00000016338PUM110099.517Papio_anubis
MGP_PahariEiJ_G0028881Pum110082.252ENSPKIG00000010578pum110077.805Paramormyrops_kingsleyae
MGP_PahariEiJ_G0028881Pum110097.132ENSPSIG00000014118PUM110097.054Pelodiscus_sinensis
MGP_PahariEiJ_G0028881Pum110076.403ENSPMGG00000005836pum110081.250Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0028881Pum1100100.000ENSPEMG00000010009Pum1100100.000Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0028881Pum110096.975ENSPCIG00000014151PUM110097.585Phascolarctos_cinereus
MGP_PahariEiJ_G0028881Pum19383.251ENSPFOG00000007289pum19981.498Poecilia_formosa
MGP_PahariEiJ_G0028881Pum110082.346ENSPLAG00000007256pum110077.617Poecilia_latipinna
MGP_PahariEiJ_G0028881Pum18582.469ENSPMEG00000019543pum19977.737Poecilia_mexicana
MGP_PahariEiJ_G0028881Pum110080.446ENSPREG00000005195pum110080.316Poecilia_reticulata
MGP_PahariEiJ_G0028881Pum110099.306ENSPPYG00000001621PUM110096.865Pongo_abelii
MGP_PahariEiJ_G0028881Pum18498.765ENSPCAG00000001979PUM17498.765Procavia_capensis
MGP_PahariEiJ_G0028881Pum110098.654ENSPCOG00000004398PUM110099.272Propithecus_coquereli
MGP_PahariEiJ_G0028881Pum110099.306ENSPVAG00000005207PUM19796.465Pteropus_vampyrus
MGP_PahariEiJ_G0028881Pum110080.569ENSPNYG00000009518pum110081.840Pundamilia_nyererei
MGP_PahariEiJ_G0028881Pum110083.995ENSPNAG00000026728pum110079.645Pygocentrus_nattereri
MGP_PahariEiJ_G0028881Pum1100100.000ENSRNOG00000011709Pum110099.663Rattus_norvegicus
MGP_PahariEiJ_G0028881Pum110099.306ENSRBIG00000042521PUM110099.517Rhinopithecus_bieti
MGP_PahariEiJ_G0028881Pum110099.306ENSRROG00000020156PUM110099.515Rhinopithecus_roxellana
MGP_PahariEiJ_G0028881Pum110099.306ENSSBOG00000032037PUM110099.515Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0028881Pum110096.807ENSSHAG00000010918PUM110096.807Sarcophilus_harrisii
MGP_PahariEiJ_G0028881Pum110080.569ENSSMAG00000010918pum110091.283Scophthalmus_maximus
MGP_PahariEiJ_G0028881Pum110080.693ENSSDUG00000009021pum110076.116Seriola_dumerili
MGP_PahariEiJ_G0028881Pum110080.693ENSSLDG00000009667pum110078.135Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0028881Pum19999.306ENSSARG00000003055PUM19199.115Sorex_araneus
MGP_PahariEiJ_G0028881Pum110096.887ENSSPUG00000006267PUM110096.296Sphenodon_punctatus
MGP_PahariEiJ_G0028881Pum19091.768ENSSPAG00000016636pum110091.283Stegastes_partitus
MGP_PahariEiJ_G0028881Pum110099.306ENSSSCG00000003591PUM110099.275Sus_scrofa
MGP_PahariEiJ_G0028881Pum110080.446ENSTRUG00000013121pum110082.426Takifugu_rubripes
MGP_PahariEiJ_G0028881Pum110080.222ENSTNIG00000016983pum19976.100Tetraodon_nigroviridis
MGP_PahariEiJ_G0028881Pum18796.341ENSTBEG00000013810PUM18996.341Tupaia_belangeri
MGP_PahariEiJ_G0028881Pum19298.540ENSTTRG00000007436PUM19098.540Tursiops_truncatus
MGP_PahariEiJ_G0028881Pum19998.336ENSUAMG00000018262-10098.336Ursus_americanus
MGP_PahariEiJ_G0028881Pum19599.275ENSUMAG00000009211PUM110099.275Ursus_maritimus
MGP_PahariEiJ_G0028881Pum110098.611ENSVPAG00000005902PUM19298.983Vicugna_pacos
MGP_PahariEiJ_G0028881Pum110099.306ENSVVUG00000014631PUM110099.275Vulpes_vulpes
MGP_PahariEiJ_G0028881Pum110087.950ENSXETG00000012904pum19986.818Xenopus_tropicalis
MGP_PahariEiJ_G0028881Pum110080.446ENSXMAG00000002945pum110076.684Xiphophorus_maculatus

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