EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0028887 (Gene tree)
Gene ID: 110322904
Gene Symbol: Srsf4
Alias: 5730499P16Rik|MNCb-2616|SRp75|Sfrs4
Full Name: serine and arginine rich splicing factor 4
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 27864 bases
Position: chr6:82796399-82824262
Accession: 110322904
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0079876	RRM_1	PF00076.22	4.7e-31	1	2
MGP_PahariEiJ_P0079876	RRM_1	PF00076.22	4.7e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0079876	-	2250	XM_021199832	MGP_PahariEiJ_P0079876	488 (aa)	XP_021055491	UPI000A313DDF
MGP_PahariEiJ_T0079877	-	852	-	MGP_PahariEiJ_P0079877	55 (aa)	-	-
MGP_PahariEiJ_T0079878	-	981	-	MGP_PahariEiJ_P0079878	31 (aa)	-	UPI00053BD782
MGP_PahariEiJ_T0079879	-	3091	-	-	- (aa)	-	-
MGP_PahariEiJ_T0079880	-	1467	-	MGP_PahariEiJ_P0079880	488 (aa)	XP_021055492	UPI000A304EB5

Gene Model

Click here to download MGP_PahariEiJ_G0028887's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0028887's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0028887	Srsf4	92	85.526	ENSG00000116350	SRSF4	93	85.371	Homo_sapiens
MGP_PahariEiJ_G0028887	Srsf4	92	80.562	ENSAMEG00000000594	SRSF4	60	94.737	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0028887	Srsf4	84	69.830	ENSAPLG00000006595	-	60	82.022	Anas_platyrhynchos
MGP_PahariEiJ_G0028887	Srsf4	86	85.116	ENSANAG00000037134	SRSF4	100	84.884	Aotus_nancymaae
MGP_PahariEiJ_G0028887	Srsf4	67	93.293	ENSBTAG00000013309	SRSF4	61	95.395	Bos_taurus
MGP_PahariEiJ_G0028887	Srsf4	92	84.416	ENSCJAG00000047192	SRSF4	93	82.759	Callithrix_jacchus
MGP_PahariEiJ_G0028887	Srsf4	89	77.925	ENSCAFG00000011669	SRSF4	57	92.727	Canis_familiaris
MGP_PahariEiJ_G0028887	Srsf4	92	79.310	ENSCAFG00020023963	SRSF4	55	94.403	Canis_lupus_dingo
MGP_PahariEiJ_G0028887	Srsf4	92	79.303	ENSCHIG00000022096	SRSF4	61	100.000	Capra_hircus
MGP_PahariEiJ_G0028887	Srsf4	92	84.716	ENSTSYG00000007903	SRSF4	93	85.870	Carlito_syrichta
MGP_PahariEiJ_G0028887	Srsf4	92	73.085	ENSCAPG00000014747	SRSF4	88	77.176	Cavia_aperea
MGP_PahariEiJ_G0028887	Srsf4	92	78.017	ENSCPOG00000036234	SRSF4	85	77.336	Cavia_porcellus
MGP_PahariEiJ_G0028887	Srsf4	92	85.965	ENSCATG00000031440	SRSF4	93	85.808	Cercocebus_atys
MGP_PahariEiJ_G0028887	Srsf4	67	86.239	ENSCLAG00000009008	SRSF4	93	76.840	Chinchilla_lanigera
MGP_PahariEiJ_G0028887	Srsf4	92	85.965	ENSCSAG00000001022	SRSF4	93	85.808	Chlorocebus_sabaeus
MGP_PahariEiJ_G0028887	Srsf4	84	80.383	ENSCHOG00000013858	SRSF4	93	76.850	Choloepus_hoffmanni
MGP_PahariEiJ_G0028887	Srsf4	69	86.944	ENSCPBG00000009020	SRSF4	93	76.609	Chrysemys_picta_bellii
MGP_PahariEiJ_G0028887	Srsf4	92	85.965	ENSCANG00000028667	SRSF4	93	85.808	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0028887	Srsf4	92	90.132	ENSCGRG00001021115	Srsf4	92	89.427	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0028887	Srsf4	85	89.286	ENSCGRG00000014137	Srsf4	92	88.517	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0028887	Srsf4	67	92.355	ENSDNOG00000047961	SRSF4	60	95.066	Dasypus_novemcinctus
MGP_PahariEiJ_G0028887	Srsf4	92	69.079	ENSDORG00000002459	Srsf4	93	68.043	Dipodomys_ordii
MGP_PahariEiJ_G0028887	Srsf4	82	100.000	ENSETEG00000009774	SRSF4	61	76.974	Echinops_telfairi
MGP_PahariEiJ_G0028887	Srsf4	92	85.065	ENSEASG00005010168	SRSF4	93	83.405	Equus_asinus_asinus
MGP_PahariEiJ_G0028887	Srsf4	92	85.065	ENSECAG00000021350	SRSF4	93	83.405	Equus_caballus
MGP_PahariEiJ_G0028887	Srsf4	92	79.425	ENSEEUG00000008479	SRSF4	92	81.441	Erinaceus_europaeus
MGP_PahariEiJ_G0028887	Srsf4	53	56.146	ENSELUG00000017551	srsf4	93	72.308	Esox_lucius
MGP_PahariEiJ_G0028887	Srsf4	92	84.802	ENSFCAG00000027821	SRSF4	85	79.524	Felis_catus
MGP_PahariEiJ_G0028887	Srsf4	92	70.824	ENSFALG00000001346	SRSF4	92	71.111	Ficedula_albicollis
MGP_PahariEiJ_G0028887	Srsf4	61	80.537	ENSFDAG00000007332	SRSF4	92	74.707	Fukomys_damarensis
MGP_PahariEiJ_G0028887	Srsf4	92	73.154	ENSGALG00000050314	SRSF4	63	83.721	Gallus_gallus
MGP_PahariEiJ_G0028887	Srsf4	52	61.328	ENSGAFG00000018496	srsf4	65	76.796	Gambusia_affinis
MGP_PahariEiJ_G0028887	Srsf4	58	94.014	ENSGAGG00000014836	SRSF4	93	77.155	Gopherus_agassizii
MGP_PahariEiJ_G0028887	Srsf4	92	85.746	ENSGGOG00000002444	SRSF4	93	85.590	Gorilla_gorilla
MGP_PahariEiJ_G0028887	Srsf4	66	86.154	ENSHGLG00000011842	SRSF4	92	75.877	Heterocephalus_glaber_female
MGP_PahariEiJ_G0028887	Srsf4	66	86.154	ENSHGLG00100017279	SRSF4	92	75.877	Heterocephalus_glaber_male
MGP_PahariEiJ_G0028887	Srsf4	92	81.978	ENSSTOG00000015908	SRSF4	93	84.245	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0028887	Srsf4	92	71.616	ENSJJAG00000022153	Srsf4	85	69.905	Jaculus_jaculus
MGP_PahariEiJ_G0028887	Srsf4	88	78.475	ENSLAFG00000002575	SRSF4	72	91.346	Loxodonta_africana
MGP_PahariEiJ_G0028887	Srsf4	92	85.965	ENSMFAG00000041784	SRSF4	93	85.808	Macaca_fascicularis
MGP_PahariEiJ_G0028887	Srsf4	85	84.798	ENSMMUG00000007110	SRSF4	87	84.634	Macaca_mulatta
MGP_PahariEiJ_G0028887	Srsf4	92	85.965	ENSMNEG00000034931	SRSF4	93	85.808	Macaca_nemestrina
MGP_PahariEiJ_G0028887	Srsf4	92	86.184	ENSMLEG00000031619	SRSF4	93	86.026	Mandrillus_leucophaeus
MGP_PahariEiJ_G0028887	Srsf4	92	72.483	ENSMGAG00000002400	SRSF4	63	83.721	Meleagris_gallopavo
MGP_PahariEiJ_G0028887	Srsf4	92	89.934	ENSMAUG00000021940	Srsf4	92	88.300	Mesocricetus_auratus
MGP_PahariEiJ_G0028887	Srsf4	92	85.217	ENSMICG00000043567	SRSF4	61	96.053	Microcebus_murinus
MGP_PahariEiJ_G0028887	Srsf4	92	92.982	ENSMOCG00000013319	Srsf4	92	90.287	Microtus_ochrogaster
MGP_PahariEiJ_G0028887	Srsf4	54	65.530	ENSMMOG00000013653	srsf4	67	86.765	Mola_mola
MGP_PahariEiJ_G0028887	Srsf4	62	93.023	ENSMODG00000011052	SRSF4	93	93.023	Monodelphis_domestica
MGP_PahariEiJ_G0028887	Srsf4	92	93.682	MGP_CAROLIEiJ_G0026555	Srsf4	92	93.187	Mus_caroli
MGP_PahariEiJ_G0028887	Srsf4	92	93.886	ENSMUSG00000028911	Srsf4	92	93.612	Mus_musculus
MGP_PahariEiJ_G0028887	Srsf4	92	93.913	MGP_SPRETEiJ_G0027535	Srsf4	92	93.421	Mus_spretus
MGP_PahariEiJ_G0028887	Srsf4	67	92.355	ENSMPUG00000015470	SRSF4	61	95.395	Mustela_putorius_furo
MGP_PahariEiJ_G0028887	Srsf4	59	96.154	ENSMLUG00000014770	SRSF4	92	79.654	Myotis_lucifugus
MGP_PahariEiJ_G0028887	Srsf4	92	85.242	ENSNGAG00000012225	Srsf4	63	96.066	Nannospalax_galili
MGP_PahariEiJ_G0028887	Srsf4	92	86.184	ENSNLEG00000009916	SRSF4	93	86.245	Nomascus_leucogenys
MGP_PahariEiJ_G0028887	Srsf4	92	80.659	ENSOPRG00000010098	SRSF4	63	93.092	Ochotona_princeps
MGP_PahariEiJ_G0028887	Srsf4	67	85.933	ENSODEG00000003230	SRSF4	60	87.171	Octodon_degus
MGP_PahariEiJ_G0028887	Srsf4	92	81.304	ENSOCUG00000001837	SRSF4	93	80.952	Oryctolagus_cuniculus
MGP_PahariEiJ_G0028887	Srsf4	92	84.361	ENSOGAG00000015515	SRSF4	92	85.088	Otolemur_garnettii
MGP_PahariEiJ_G0028887	Srsf4	92	85.746	ENSPPAG00000028357	SRSF4	93	85.590	Pan_paniscus
MGP_PahariEiJ_G0028887	Srsf4	92	84.802	ENSPPRG00000016248	SRSF4	85	79.524	Panthera_pardus
MGP_PahariEiJ_G0028887	Srsf4	92	85.746	ENSPTRG00000000445	SRSF4	93	85.590	Pan_troglodytes
MGP_PahariEiJ_G0028887	Srsf4	92	86.184	ENSPANG00000021937	SRSF4	93	86.026	Papio_anubis
MGP_PahariEiJ_G0028887	Srsf4	88	85.747	ENSPEMG00000003365	Srsf4	92	88.067	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0028887	Srsf4	92	86.184	ENSPPYG00000001629	SRSF4	93	86.026	Pongo_abelii
MGP_PahariEiJ_G0028887	Srsf4	91	79.295	ENSPCAG00000009879	SRSF4	62	93.750	Procavia_capensis
MGP_PahariEiJ_G0028887	Srsf4	92	85.903	ENSPCOG00000027341	SRSF4	62	95.724	Propithecus_coquereli
MGP_PahariEiJ_G0028887	Srsf4	92	94.702	ENSRNOG00000010007	Srsf4	92	91.832	Rattus_norvegicus
MGP_PahariEiJ_G0028887	Srsf4	92	85.965	ENSRBIG00000035789	SRSF4	93	85.808	Rhinopithecus_bieti
MGP_PahariEiJ_G0028887	Srsf4	92	85.965	ENSRROG00000029463	SRSF4	93	85.808	Rhinopithecus_roxellana
MGP_PahariEiJ_G0028887	Srsf4	92	84.632	ENSSBOG00000027098	SRSF4	85	81.542	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0028887	Srsf4	57	90.681	ENSSHAG00000012407	SRSF4	94	91.912	Sarcophilus_harrisii
MGP_PahariEiJ_G0028887	Srsf4	62	63.787	ENSSDUG00000007387	srsf4	54	87.640	Seriola_dumerili
MGP_PahariEiJ_G0028887	Srsf4	99	72.617	ENSSPUG00000015318	-	63	86.319	Sphenodon_punctatus
MGP_PahariEiJ_G0028887	Srsf4	54	66.909	ENSSPAG00000014538	srsf4	83	85.950	Stegastes_partitus
MGP_PahariEiJ_G0028887	Srsf4	67	88.991	ENSSSCG00000003589	SRSF4	62	92.434	Sus_scrofa
MGP_PahariEiJ_G0028887	Srsf4	84	72.222	ENSTGUG00000000765	SRSF4	92	67.952	Taeniopygia_guttata
MGP_PahariEiJ_G0028887	Srsf4	66	88.889	ENSTTRG00000002572	SRSF4	61	94.079	Tursiops_truncatus
MGP_PahariEiJ_G0028887	Srsf4	92	83.621	ENSUAMG00000006106	SRSF4	61	95.395	Ursus_americanus
MGP_PahariEiJ_G0028887	Srsf4	89	79.379	ENSVVUG00000012690	SRSF4	57	93.407	Vulpes_vulpes