EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0029005 (Gene tree)
Gene ID: 110323330
Gene Symbol: Zbtb40
Alias: -
Full Name: zinc finger and BTB domain containing 40
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 71639 bases
Position: chr6:87928927-88000565
Accession: 2682254
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0080378	zf-C2H2	PF00096.26	6.9e-33	1	4
MGP_PahariEiJ_P0080378	zf-C2H2	PF00096.26	6.9e-33	2	4
MGP_PahariEiJ_P0080378	zf-C2H2	PF00096.26	6.9e-33	3	4
MGP_PahariEiJ_P0080378	zf-C2H2	PF00096.26	6.9e-33	4	4
MGP_PahariEiJ_P0080378	zf-met	PF12874.7	0.00018	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0080377	-	7278	-	MGP_PahariEiJ_P0080377	1256 (aa)	-	-
MGP_PahariEiJ_T0080379	-	4398	-	-	- (aa)	-	-
MGP_PahariEiJ_T0080378	-	7147	-	MGP_PahariEiJ_P0080378	1257 (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0029005's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0029005's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0029005	Zbtb40	100	78.603	ENSG00000184677	ZBTB40	100	78.603	Homo_sapiens
MGP_PahariEiJ_G0029005	Zbtb40	100	77.226	ENSAMEG00000014635	ZBTB40	100	77.226	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0029005	Zbtb40	100	93.852	ENSANAG00000010550	ZBTB40	100	78.190	Aotus_nancymaae
MGP_PahariEiJ_G0029005	Zbtb40	100	75.315	ENSBTAG00000016448	ZBTB40	100	75.315	Bos_taurus
MGP_PahariEiJ_G0029005	Zbtb40	100	78.081	ENSCJAG00000005869	ZBTB40	100	78.081	Callithrix_jacchus
MGP_PahariEiJ_G0029005	Zbtb40	100	75.669	ENSCAFG00000014644	ZBTB40	100	75.669	Canis_familiaris
MGP_PahariEiJ_G0029005	Zbtb40	100	76.554	ENSCAFG00020019562	ZBTB40	100	76.554	Canis_lupus_dingo
MGP_PahariEiJ_G0029005	Zbtb40	100	75.177	ENSCHIG00000007943	ZBTB40	100	75.177	Capra_hircus
MGP_PahariEiJ_G0029005	Zbtb40	100	76.554	ENSTSYG00000000979	ZBTB40	100	76.554	Carlito_syrichta
MGP_PahariEiJ_G0029005	Zbtb40	100	75.054	ENSCAPG00000009177	ZBTB40	100	75.054	Cavia_aperea
MGP_PahariEiJ_G0029005	Zbtb40	100	75.335	ENSCPOG00000012844	ZBTB40	100	75.335	Cavia_porcellus
MGP_PahariEiJ_G0029005	Zbtb40	100	77.535	ENSCCAG00000021093	ZBTB40	100	77.535	Cebus_capucinus
MGP_PahariEiJ_G0029005	Zbtb40	100	78.384	ENSCATG00000031739	ZBTB40	100	78.384	Cercocebus_atys
MGP_PahariEiJ_G0029005	Zbtb40	100	79.252	ENSCLAG00000015032	ZBTB40	100	79.252	Chinchilla_lanigera
MGP_PahariEiJ_G0029005	Zbtb40	100	77.760	ENSCSAG00000000911	ZBTB40	100	77.760	Chlorocebus_sabaeus
MGP_PahariEiJ_G0029005	Zbtb40	100	95.402	ENSCHOG00000011197	ZBTB40	93	95.402	Choloepus_hoffmanni
MGP_PahariEiJ_G0029005	Zbtb40	100	78.057	ENSCANG00000038636	ZBTB40	100	78.057	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0029005	Zbtb40	100	84.726	ENSCGRG00001016016	Zbtb40	100	84.726	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0029005	Zbtb40	100	84.738	ENSCGRG00000008459	Zbtb40	100	84.738	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0029005	Zbtb40	91	50.943	ENSDARG00000091762	zbtb40	99	50.943	Danio_rerio
MGP_PahariEiJ_G0029005	Zbtb40	100	77.226	ENSDNOG00000006200	ZBTB40	100	77.226	Dasypus_novemcinctus
MGP_PahariEiJ_G0029005	Zbtb40	100	77.317	ENSDORG00000016495	Zbtb40	100	77.317	Dipodomys_ordii
MGP_PahariEiJ_G0029005	Zbtb40	100	76.019	ENSEASG00005007270	ZBTB40	100	76.019	Equus_asinus_asinus
MGP_PahariEiJ_G0029005	Zbtb40	99	91.564	ENSECAG00000016319	ZBTB40	99	75.311	Equus_caballus
MGP_PahariEiJ_G0029005	Zbtb40	83	71.943	ENSEEUG00000001708	ZBTB40	100	71.943	Erinaceus_europaeus
MGP_PahariEiJ_G0029005	Zbtb40	100	78.190	ENSFCAG00000028182	ZBTB40	100	78.190	Felis_catus
MGP_PahariEiJ_G0029005	Zbtb40	98	72.926	ENSFDAG00000003410	ZBTB40	100	72.926	Fukomys_damarensis
MGP_PahariEiJ_G0029005	Zbtb40	100	78.493	ENSGGOG00000010010	ZBTB40	100	78.493	Gorilla_gorilla
MGP_PahariEiJ_G0029005	Zbtb40	100	92.593	ENSHGLG00000016950	ZBTB40	95	66.719	Heterocephalus_glaber_female
MGP_PahariEiJ_G0029005	Zbtb40	100	92.593	ENSHGLG00100008314	ZBTB40	95	66.719	Heterocephalus_glaber_male
MGP_PahariEiJ_G0029005	Zbtb40	100	77.069	ENSSTOG00000009598	ZBTB40	100	77.069	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0029005	Zbtb40	100	78.554	ENSJJAG00000018013	Zbtb40	100	78.793	Jaculus_jaculus
MGP_PahariEiJ_G0029005	Zbtb40	100	78.651	ENSLAFG00000006483	ZBTB40	100	78.651	Loxodonta_africana
MGP_PahariEiJ_G0029005	Zbtb40	100	78.166	ENSMFAG00000043032	ZBTB40	100	78.166	Macaca_fascicularis
MGP_PahariEiJ_G0029005	Zbtb40	100	78.166	ENSMMUG00000018618	ZBTB40	100	78.166	Macaca_mulatta
MGP_PahariEiJ_G0029005	Zbtb40	100	78.166	ENSMNEG00000032628	ZBTB40	100	78.166	Macaca_nemestrina
MGP_PahariEiJ_G0029005	Zbtb40	100	78.275	ENSMLEG00000027910	ZBTB40	100	78.275	Mandrillus_leucophaeus
MGP_PahariEiJ_G0029005	Zbtb40	100	84.817	ENSMAUG00000010466	Zbtb40	100	84.817	Mesocricetus_auratus
MGP_PahariEiJ_G0029005	Zbtb40	100	81.293	ENSMICG00000007464	ZBTB40	100	81.293	Microcebus_murinus
MGP_PahariEiJ_G0029005	Zbtb40	100	86.418	ENSMOCG00000013259	Zbtb40	100	86.418	Microtus_ochrogaster
MGP_PahariEiJ_G0029005	Zbtb40	100	95.390	MGP_CAROLIEiJ_G0026672	Zbtb40	100	95.390	Mus_caroli
MGP_PahariEiJ_G0029005	Zbtb40	100	95.310	ENSMUSG00000060862	Zbtb40	99	98.507	Mus_musculus
MGP_PahariEiJ_G0029005	Zbtb40	100	95.469	MGP_SPRETEiJ_G0027652	Zbtb40	100	95.469	Mus_spretus
MGP_PahariEiJ_G0029005	Zbtb40	100	75.177	ENSMPUG00000015961	ZBTB40	100	75.177	Mustela_putorius_furo
MGP_PahariEiJ_G0029005	Zbtb40	100	80.763	ENSNGAG00000019354	Zbtb40	100	80.763	Nannospalax_galili
MGP_PahariEiJ_G0029005	Zbtb40	100	78.057	ENSNLEG00000008268	ZBTB40	100	78.057	Nomascus_leucogenys
MGP_PahariEiJ_G0029005	Zbtb40	95	77.489	ENSOPRG00000003103	ZBTB40	95	77.489	Ochotona_princeps
MGP_PahariEiJ_G0029005	Zbtb40	100	78.487	ENSOGAG00000004797	ZBTB40	100	78.487	Otolemur_garnettii
MGP_PahariEiJ_G0029005	Zbtb40	100	75.491	ENSOARG00000008054	ZBTB40	100	75.491	Ovis_aries
MGP_PahariEiJ_G0029005	Zbtb40	100	78.166	ENSPPAG00000034112	ZBTB40	100	78.166	Pan_paniscus
MGP_PahariEiJ_G0029005	Zbtb40	100	77.863	ENSPPRG00000021468	ZBTB40	100	77.863	Panthera_pardus
MGP_PahariEiJ_G0029005	Zbtb40	100	77.754	ENSPTIG00000010874	ZBTB40	100	77.754	Panthera_tigris_altaica
MGP_PahariEiJ_G0029005	Zbtb40	100	78.166	ENSPTRG00000000315	ZBTB40	100	78.166	Pan_troglodytes
MGP_PahariEiJ_G0029005	Zbtb40	100	80.499	ENSPANG00000018749	ZBTB40	100	80.499	Papio_anubis
MGP_PahariEiJ_G0029005	Zbtb40	100	85.782	ENSPEMG00000009389	Zbtb40	100	85.782	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0029005	Zbtb40	100	64.101	ENSPCIG00000026425	ZBTB40	100	64.347	Phascolarctos_cinereus
MGP_PahariEiJ_G0029005	Zbtb40	100	77.760	ENSPPYG00000001752	ZBTB40	100	77.760	Pongo_abelii
MGP_PahariEiJ_G0029005	Zbtb40	100	96.571	ENSPCOG00000006905	ZBTB40	93	96.571	Propithecus_coquereli
MGP_PahariEiJ_G0029005	Zbtb40	100	91.169	ENSRNOG00000022039	Zbtb40	100	91.169	Rattus_norvegicus
MGP_PahariEiJ_G0029005	Zbtb40	100	78.384	ENSRBIG00000034608	ZBTB40	100	78.384	Rhinopithecus_bieti
MGP_PahariEiJ_G0029005	Zbtb40	100	78.275	ENSRROG00000034514	ZBTB40	100	78.275	Rhinopithecus_roxellana
MGP_PahariEiJ_G0029005	Zbtb40	100	77.535	ENSSBOG00000027235	ZBTB40	100	77.535	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0029005	Zbtb40	100	76.772	ENSUAMG00000020372	ZBTB40	100	76.772	Ursus_americanus
MGP_PahariEiJ_G0029005	Zbtb40	100	77.208	ENSUMAG00000013539	ZBTB40	100	77.208	Ursus_maritimus
MGP_PahariEiJ_G0029005	Zbtb40	100	76.772	ENSVVUG00000025752	ZBTB40	100	76.772	Vulpes_vulpes