EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0029252 (Gene tree)
Gene ID: 110323887
Gene Symbol: Mrpl20
Alias: 2610008D01Rik|4930425I20Rik
Full Name: mitochondrial ribosomal protein L20
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 6888 bases
Position: chr6:106710858-106717745
Accession: 2137221
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0081453	Ribosomal_L20	PF00453.18	1.3e-33	1	1
MGP_PahariEiJ_P0081454	Ribosomal_L20	PF00453.18	7.4e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0081453	-	767	-	MGP_PahariEiJ_P0081453	149 (aa)	-	-
MGP_PahariEiJ_T0081452	-	483	-	-	- (aa)	-	-
MGP_PahariEiJ_T0081455	-	813	-	MGP_PahariEiJ_P0081455	149 (aa)	-	-
MGP_PahariEiJ_T0081454	-	497	-	MGP_PahariEiJ_P0081454	112 (aa)	-	-
MGP_PahariEiJ_T0081456	-	577	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0029252's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0029252's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0029252	Mrpl20	100	83.893	ENSG00000242485	MRPL20	100	83.893	Homo_sapiens
MGP_PahariEiJ_G0029252	Mrpl20	98	67.123	ENSAPOG00000011835	mrpl20	98	67.123	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0029252	Mrpl20	93	88.489	ENSAMEG00000013932	MRPL20	93	88.489	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0029252	Mrpl20	98	67.808	ENSACIG00000019179	mrpl20	98	67.808	Amphilophus_citrinellus
MGP_PahariEiJ_G0029252	Mrpl20	98	67.123	ENSAOCG00000007734	mrpl20	98	67.123	Amphiprion_ocellaris
MGP_PahariEiJ_G0029252	Mrpl20	98	66.438	ENSAPEG00000014049	mrpl20	98	66.438	Amphiprion_percula
MGP_PahariEiJ_G0029252	Mrpl20	98	67.123	ENSATEG00000007369	mrpl20	98	67.123	Anabas_testudineus
MGP_PahariEiJ_G0029252	Mrpl20	99	67.568	ENSACAG00000009143	MRPL20	99	67.568	Anolis_carolinensis
MGP_PahariEiJ_G0029252	Mrpl20	100	76.316	ENSANAG00000021078	-	100	76.316	Aotus_nancymaae
MGP_PahariEiJ_G0029252	Mrpl20	91	67.407	ENSACLG00000021726	mrpl20	87	67.407	Astatotilapia_calliptera
MGP_PahariEiJ_G0029252	Mrpl20	80	64.706	ENSAMXG00000035403	mrpl20	84	64.706	Astyanax_mexicanus
MGP_PahariEiJ_G0029252	Mrpl20	100	83.893	ENSBTAG00000004872	MRPL20	75	83.893	Bos_taurus
MGP_PahariEiJ_G0029252	Mrpl20	100	84.564	ENSCJAG00000039231	-	100	84.564	Callithrix_jacchus
MGP_PahariEiJ_G0029252	Mrpl20	100	87.248	ENSCAFG00000019259	MRPL20	100	87.248	Canis_familiaris
MGP_PahariEiJ_G0029252	Mrpl20	74	85.542	ENSCAFG00020025880	-	65	83.784	Canis_lupus_dingo
MGP_PahariEiJ_G0029252	Mrpl20	100	83.893	ENSCHIG00000010545	MRPL20	100	83.893	Capra_hircus
MGP_PahariEiJ_G0029252	Mrpl20	100	89.262	ENSTSYG00000033620	MRPL20	100	89.262	Carlito_syrichta
MGP_PahariEiJ_G0029252	Mrpl20	100	87.248	ENSCPOG00000023001	MRPL20	100	87.248	Cavia_porcellus
MGP_PahariEiJ_G0029252	Mrpl20	100	85.235	ENSCCAG00000032768	-	100	85.235	Cebus_capucinus
MGP_PahariEiJ_G0029252	Mrpl20	86	72.656	ENSCATG00000040437	-	67	72.656	Cercocebus_atys
MGP_PahariEiJ_G0029252	Mrpl20	100	84.564	ENSCATG00000033927	MRPL20	100	84.564	Cercocebus_atys
MGP_PahariEiJ_G0029252	Mrpl20	100	85.714	ENSCLAG00000009757	-	100	85.714	Chinchilla_lanigera
MGP_PahariEiJ_G0029252	Mrpl20	100	55.705	ENSCLAG00000011866	-	100	55.705	Chinchilla_lanigera
MGP_PahariEiJ_G0029252	Mrpl20	100	83.893	ENSCSAG00000019479	-	100	83.893	Chlorocebus_sabaeus
MGP_PahariEiJ_G0029252	Mrpl20	100	84.564	ENSCSAG00000000688	-	100	84.564	Chlorocebus_sabaeus
MGP_PahariEiJ_G0029252	Mrpl20	100	76.786	ENSCPBG00000022905	MRPL20	100	76.786	Chrysemys_picta_bellii
MGP_PahariEiJ_G0029252	Mrpl20	100	73.643	ENSCANG00000039625	MRPL20	100	73.643	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0029252	Mrpl20	100	94.643	ENSCGRG00001024028	Mrpl20	100	94.643	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0029252	Mrpl20	100	94.643	ENSCGRG00000007447	Mrpl20	100	94.643	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0029252	Mrpl20	98	66.438	ENSCSEG00000002016	mrpl20	85	66.438	Cynoglossus_semilaevis
MGP_PahariEiJ_G0029252	Mrpl20	98	66.438	ENSCVAG00000022768	mrpl20	99	66.438	Cyprinodon_variegatus
MGP_PahariEiJ_G0029252	Mrpl20	100	60.403	ENSDARG00000090462	mrpl20	100	60.403	Danio_rerio
MGP_PahariEiJ_G0029252	Mrpl20	99	83.108	ENSDNOG00000044958	MRPL20	99	83.108	Dasypus_novemcinctus
MGP_PahariEiJ_G0029252	Mrpl20	74	89.157	ENSDORG00000028591	Mrpl20	100	89.157	Dipodomys_ordii
MGP_PahariEiJ_G0029252	Mrpl20	83	39.024	FBgn0036335	mRpL20	82	39.024	Drosophila_melanogaster
MGP_PahariEiJ_G0029252	Mrpl20	99	72.973	ENSETEG00000012315	MRPL20	99	72.973	Echinops_telfairi
MGP_PahariEiJ_G0029252	Mrpl20	99	64.626	ENSEBUG00000002214	mrpl20	99	64.626	Eptatretus_burgeri
MGP_PahariEiJ_G0029252	Mrpl20	100	85.235	ENSEASG00005014515	MRPL20	100	85.235	Equus_asinus_asinus
MGP_PahariEiJ_G0029252	Mrpl20	100	85.235	ENSECAG00000018364	MRPL20	100	85.235	Equus_caballus
MGP_PahariEiJ_G0029252	Mrpl20	81	70.833	ENSEEUG00000004596	-	100	70.833	Erinaceus_europaeus
MGP_PahariEiJ_G0029252	Mrpl20	98	67.808	ENSELUG00000013398	mrpl20	98	67.808	Esox_lucius
MGP_PahariEiJ_G0029252	Mrpl20	99	87.075	ENSFCAG00000033203	MRPL20	99	87.075	Felis_catus
MGP_PahariEiJ_G0029252	Mrpl20	100	69.128	ENSFALG00000009334	MRPL20	100	69.128	Ficedula_albicollis
MGP_PahariEiJ_G0029252	Mrpl20	100	85.906	ENSFDAG00000013320	MRPL20	100	85.906	Fukomys_damarensis
MGP_PahariEiJ_G0029252	Mrpl20	98	65.753	ENSFHEG00000004769	mrpl20	99	65.753	Fundulus_heteroclitus
MGP_PahariEiJ_G0029252	Mrpl20	97	64.583	ENSGMOG00000008125	mrpl20	100	64.583	Gadus_morhua
MGP_PahariEiJ_G0029252	Mrpl20	100	74.497	ENSGALG00000001542	MRPL20	100	74.497	Gallus_gallus
MGP_PahariEiJ_G0029252	Mrpl20	98	67.123	ENSGAFG00000021580	mrpl20	99	67.123	Gambusia_affinis
MGP_PahariEiJ_G0029252	Mrpl20	98	66.438	ENSGACG00000001134	mrpl20	98	66.438	Gasterosteus_aculeatus
MGP_PahariEiJ_G0029252	Mrpl20	100	75.168	ENSGAGG00000001945	MRPL20	100	75.168	Gopherus_agassizii
MGP_PahariEiJ_G0029252	Mrpl20	100	83.893	ENSGGOG00000027251	-	100	83.893	Gorilla_gorilla
MGP_PahariEiJ_G0029252	Mrpl20	98	67.123	ENSHBUG00000023626	mrpl20	98	67.123	Haplochromis_burtoni
MGP_PahariEiJ_G0029252	Mrpl20	100	83.893	ENSHGLG00000017538	MRPL20	100	83.893	Heterocephalus_glaber_female
MGP_PahariEiJ_G0029252	Mrpl20	100	84.564	ENSHGLG00100012816	MRPL20	100	84.564	Heterocephalus_glaber_male
MGP_PahariEiJ_G0029252	Mrpl20	98	61.644	ENSHCOG00000005830	mrpl20	98	61.644	Hippocampus_comes
MGP_PahariEiJ_G0029252	Mrpl20	99	63.265	ENSIPUG00000018055	mrpl20	99	63.265	Ictalurus_punctatus
MGP_PahariEiJ_G0029252	Mrpl20	100	91.071	ENSJJAG00000020728	Mrpl20	100	91.071	Jaculus_jaculus
MGP_PahariEiJ_G0029252	Mrpl20	98	69.178	ENSKMAG00000021650	mrpl20	98	69.178	Kryptolebias_marmoratus
MGP_PahariEiJ_G0029252	Mrpl20	98	67.123	ENSLBEG00000021562	mrpl20	98	67.123	Labrus_bergylta
MGP_PahariEiJ_G0029252	Mrpl20	100	75.839	ENSLACG00000019149	MRPL20	100	75.839	Latimeria_chalumnae
MGP_PahariEiJ_G0029252	Mrpl20	99	86.486	ENSLAFG00000010706	MRPL20	99	86.486	Loxodonta_africana
MGP_PahariEiJ_G0029252	Mrpl20	100	84.564	ENSMFAG00000043214	MRPL20	100	84.564	Macaca_fascicularis
MGP_PahariEiJ_G0029252	Mrpl20	94	71.429	ENSMFAG00000046195	-	83	71.429	Macaca_fascicularis
MGP_PahariEiJ_G0029252	Mrpl20	96	57.931	ENSMMUG00000038877	MRPL20	99	57.931	Macaca_mulatta
MGP_PahariEiJ_G0029252	Mrpl20	100	87.952	ENSMNEG00000041891	MRPL20	100	84.564	Macaca_nemestrina
MGP_PahariEiJ_G0029252	Mrpl20	89	72.932	ENSMNEG00000000027	-	68	72.932	Macaca_nemestrina
MGP_PahariEiJ_G0029252	Mrpl20	81	85.833	ENSMLEG00000037086	MRPL20	100	85.833	Mandrillus_leucophaeus
MGP_PahariEiJ_G0029252	Mrpl20	91	71.111	ENSMLEG00000037605	-	83	71.111	Mandrillus_leucophaeus
MGP_PahariEiJ_G0029252	Mrpl20	98	68.493	ENSMAMG00000023884	mrpl20	98	68.493	Mastacembelus_armatus
MGP_PahariEiJ_G0029252	Mrpl20	98	67.123	ENSMZEG00005011376	mrpl20	98	67.123	Maylandia_zebra
MGP_PahariEiJ_G0029252	Mrpl20	81	71.901	ENSMGAG00000002774	MRPL20	82	71.901	Meleagris_gallopavo
MGP_PahariEiJ_G0029252	Mrpl20	100	93.750	ENSMAUG00000013299	Mrpl20	100	93.750	Mesocricetus_auratus
MGP_PahariEiJ_G0029252	Mrpl20	100	86.577	ENSMICG00000041892	MRPL20	100	86.577	Microcebus_murinus
MGP_PahariEiJ_G0029252	Mrpl20	100	87.248	ENSMOCG00000009545	-	100	87.248	Microtus_ochrogaster
MGP_PahariEiJ_G0029252	Mrpl20	100	94.643	ENSMOCG00000000404	-	100	94.643	Microtus_ochrogaster
MGP_PahariEiJ_G0029252	Mrpl20	97	65.138	ENSMMOG00000021753	mrpl20	97	65.138	Mola_mola
MGP_PahariEiJ_G0029252	Mrpl20	100	77.181	ENSMODG00000006562	MRPL20	100	77.181	Monodelphis_domestica
MGP_PahariEiJ_G0029252	Mrpl20	98	66.438	ENSMALG00000018593	mrpl20	98	66.438	Monopterus_albus
MGP_PahariEiJ_G0029252	Mrpl20	100	94.631	MGP_CAROLIEiJ_G0026904	Mrpl20	100	94.631	Mus_caroli
MGP_PahariEiJ_G0029252	Mrpl20	100	93.960	ENSMUSG00000029066	Mrpl20	100	93.960	Mus_musculus
MGP_PahariEiJ_G0029252	Mrpl20	100	93.960	MGP_SPRETEiJ_G0027898	Mrpl20	100	93.960	Mus_spretus
MGP_PahariEiJ_G0029252	Mrpl20	100	85.906	ENSMLUG00000011857	MRPL20	100	85.906	Myotis_lucifugus
MGP_PahariEiJ_G0029252	Mrpl20	100	89.933	ENSNGAG00000021688	Mrpl20	100	89.933	Nannospalax_galili
MGP_PahariEiJ_G0029252	Mrpl20	98	67.123	ENSNBRG00000006018	mrpl20	98	67.123	Neolamprologus_brichardi
MGP_PahariEiJ_G0029252	Mrpl20	75	85.714	ENSNLEG00000013868	-	84	84.884	Nomascus_leucogenys
MGP_PahariEiJ_G0029252	Mrpl20	100	86.577	ENSODEG00000010734	MRPL20	100	86.577	Octodon_degus
MGP_PahariEiJ_G0029252	Mrpl20	98	67.808	ENSONIG00000018914	mrpl20	98	67.808	Oreochromis_niloticus
MGP_PahariEiJ_G0029252	Mrpl20	98	69.178	ENSORLG00000018304	mrpl20	98	69.178	Oryzias_latipes
MGP_PahariEiJ_G0029252	Mrpl20	98	69.178	ENSORLG00020009128	mrpl20	98	69.178	Oryzias_latipes_hni
MGP_PahariEiJ_G0029252	Mrpl20	98	69.178	ENSORLG00015005156	mrpl20	98	69.178	Oryzias_latipes_hsok
MGP_PahariEiJ_G0029252	Mrpl20	98	69.863	ENSOMEG00000015654	mrpl20	98	69.863	Oryzias_melastigma
MGP_PahariEiJ_G0029252	Mrpl20	100	87.248	ENSOGAG00000005968	MRPL20	100	87.248	Otolemur_garnettii
MGP_PahariEiJ_G0029252	Mrpl20	100	83.893	ENSOARG00000003529	MRPL20	100	83.893	Ovis_aries
MGP_PahariEiJ_G0029252	Mrpl20	100	83.893	ENSPPAG00000042350	-	100	83.893	Pan_paniscus
MGP_PahariEiJ_G0029252	Mrpl20	99	87.755	ENSPPRG00000009188	MRPL20	99	87.755	Panthera_pardus
MGP_PahariEiJ_G0029252	Mrpl20	79	86.517	ENSPTIG00000020769	MRPL20	98	86.517	Panthera_tigris_altaica
MGP_PahariEiJ_G0029252	Mrpl20	100	83.893	ENSPTRG00000000029	MRPL20	100	83.893	Pan_troglodytes
MGP_PahariEiJ_G0029252	Mrpl20	100	84.564	ENSPANG00000015802	MRPL20	100	84.564	Papio_anubis
MGP_PahariEiJ_G0029252	Mrpl20	94	71.429	ENSPANG00000036197	-	100	71.429	Papio_anubis
MGP_PahariEiJ_G0029252	Mrpl20	100	63.087	ENSPKIG00000002248	mrpl20	100	63.087	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0029252	Mrpl20	95	66.901	ENSPSIG00000003939	MRPL20	100	66.901	Pelodiscus_sinensis
MGP_PahariEiJ_G0029252	Mrpl20	98	67.808	ENSPMGG00000003966	mrpl20	98	67.808	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0029252	Mrpl20	100	72.441	ENSPEMG00000009458	-	85	72.441	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0029252	Mrpl20	63	38.298	ENSPMAG00000009990	-	75	37.895	Petromyzon_marinus
MGP_PahariEiJ_G0029252	Mrpl20	100	76.510	ENSPCIG00000007747	MRPL20	100	76.510	Phascolarctos_cinereus
MGP_PahariEiJ_G0029252	Mrpl20	98	67.808	ENSPFOG00000018163	mrpl20	99	67.808	Poecilia_formosa
MGP_PahariEiJ_G0029252	Mrpl20	98	67.808	ENSPLAG00000016451	mrpl20	99	67.808	Poecilia_latipinna
MGP_PahariEiJ_G0029252	Mrpl20	98	67.808	ENSPMEG00000002561	mrpl20	99	67.808	Poecilia_mexicana
MGP_PahariEiJ_G0029252	Mrpl20	98	64.626	ENSPREG00000004925	mrpl20	99	64.626	Poecilia_reticulata
MGP_PahariEiJ_G0029252	Mrpl20	99	85.811	ENSPCAG00000001425	MRPL20	99	85.811	Procavia_capensis
MGP_PahariEiJ_G0029252	Mrpl20	100	85.235	ENSPCOG00000025653	-	100	85.235	Propithecus_coquereli
MGP_PahariEiJ_G0029252	Mrpl20	99	77.027	ENSPCOG00000004450	-	99	77.027	Propithecus_coquereli
MGP_PahariEiJ_G0029252	Mrpl20	98	67.123	ENSPNYG00000008626	mrpl20	98	67.123	Pundamilia_nyererei
MGP_PahariEiJ_G0029252	Mrpl20	99	63.265	ENSPNAG00000016694	mrpl20	99	63.265	Pygocentrus_nattereri
MGP_PahariEiJ_G0029252	Mrpl20	100	93.960	ENSRNOG00000018647	Mrpl20	100	93.960	Rattus_norvegicus
MGP_PahariEiJ_G0029252	Mrpl20	100	85.235	ENSRBIG00000042278	MRPL20	100	85.235	Rhinopithecus_bieti
MGP_PahariEiJ_G0029252	Mrpl20	100	85.235	ENSRROG00000003574	MRPL20	100	85.235	Rhinopithecus_roxellana
MGP_PahariEiJ_G0029252	Mrpl20	74	85.542	ENSSBOG00000035454	-	100	85.542	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0029252	Mrpl20	100	67.097	ENSSHAG00000008197	MRPL20	100	67.097	Sarcophilus_harrisii
MGP_PahariEiJ_G0029252	Mrpl20	100	63.758	ENSSFOG00015016009	mrpl20	100	63.758	Scleropages_formosus
MGP_PahariEiJ_G0029252	Mrpl20	98	69.178	ENSSMAG00000000214	mrpl20	98	69.178	Scophthalmus_maximus
MGP_PahariEiJ_G0029252	Mrpl20	98	68.493	ENSSDUG00000008646	mrpl20	98	68.493	Seriola_dumerili
MGP_PahariEiJ_G0029252	Mrpl20	98	68.493	ENSSLDG00000023171	mrpl20	98	68.493	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0029252	Mrpl20	100	67.785	ENSSPUG00000016911	MRPL20	100	67.785	Sphenodon_punctatus
MGP_PahariEiJ_G0029252	Mrpl20	98	67.123	ENSSPAG00000012887	mrpl20	98	67.123	Stegastes_partitus
MGP_PahariEiJ_G0029252	Mrpl20	99	86.486	ENSSSCG00000033374	MRPL20	99	86.486	Sus_scrofa
MGP_PahariEiJ_G0029252	Mrpl20	81	71.667	ENSTGUG00000003113	MRPL20	98	71.667	Taeniopygia_guttata
MGP_PahariEiJ_G0029252	Mrpl20	97	66.207	ENSTRUG00000021410	mrpl20	97	66.207	Takifugu_rubripes
MGP_PahariEiJ_G0029252	Mrpl20	100	67.114	ENSTNIG00000014657	mrpl20	100	67.114	Tetraodon_nigroviridis
MGP_PahariEiJ_G0029252	Mrpl20	100	87.919	ENSTBEG00000008735	MRPL20	100	87.919	Tupaia_belangeri
MGP_PahariEiJ_G0029252	Mrpl20	80	85.714	ENSTTRG00000017046	MRPL20	99	85.714	Tursiops_truncatus
MGP_PahariEiJ_G0029252	Mrpl20	100	88.591	ENSUAMG00000012829	-	100	88.591	Ursus_americanus
MGP_PahariEiJ_G0029252	Mrpl20	91	62.857	ENSUAMG00000028406	-	91	62.857	Ursus_americanus
MGP_PahariEiJ_G0029252	Mrpl20	91	62.857	ENSUMAG00000003240	-	91	62.857	Ursus_maritimus
MGP_PahariEiJ_G0029252	Mrpl20	83	80.612	ENSUMAG00000001917	-	86	80.612	Ursus_maritimus
MGP_PahariEiJ_G0029252	Mrpl20	74	84.337	ENSVPAG00000001846	-	100	84.337	Vicugna_pacos
MGP_PahariEiJ_G0029252	Mrpl20	100	87.919	ENSVVUG00000004455	MRPL20	100	87.919	Vulpes_vulpes
MGP_PahariEiJ_G0029252	Mrpl20	100	69.128	ENSXETG00000011118	mrpl20	100	69.128	Xenopus_tropicalis
MGP_PahariEiJ_G0029252	Mrpl20	98	66.438	ENSXCOG00000004220	mrpl20	99	66.438	Xiphophorus_couchianus
MGP_PahariEiJ_G0029252	Mrpl20	98	66.438	ENSXMAG00000016652	mrpl20	99	66.438	Xiphophorus_maculatus