EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0029260 (Gene tree)
Gene ID: 110323765
Gene Symbol: Pusl1
Alias: 2810021I11Rik
Full Name: pseudouridine synthase like 1
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 3927 bases
Position: chr6:106796920-106800846
Accession: 110323765
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0081496	PseudoU_synth_1	PF01416.20	2.8e-33	1	2
MGP_PahariEiJ_P0081496	PseudoU_synth_1	PF01416.20	2.8e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0081499	-	678	-	-	- (aa)	-	-
MGP_PahariEiJ_T0081498	-	887	-	-	- (aa)	-	-
MGP_PahariEiJ_T0081494	-	699	-	-	- (aa)	-	-
MGP_PahariEiJ_T0081497	-	599	-	-	- (aa)	-	-
MGP_PahariEiJ_T0081496	-	1270	XM_021201125	MGP_PahariEiJ_P0081496	291 (aa)	XP_021056784	UPI000A30C2FA
MGP_PahariEiJ_T0081501	-	467	-	-	- (aa)	-	-
MGP_PahariEiJ_T0081500	-	515	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0029260's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0029260's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0029260	Pusl1	100	79.725	ENSG00000169972	PUSL1	100	84.000	Homo_sapiens
MGP_PahariEiJ_G0029260	Pusl1	94	48.188	ENSAPOG00000016290	pusl1	92	48.188	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0029260	Pusl1	98	78.671	ENSAMEG00000013752	PUSL1	94	78.671	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0029260	Pusl1	96	44.286	ENSACIG00000015240	pusl1	99	46.350	Amphilophus_citrinellus
MGP_PahariEiJ_G0029260	Pusl1	99	47.079	ENSAOCG00000019419	pusl1	87	47.079	Amphiprion_ocellaris
MGP_PahariEiJ_G0029260	Pusl1	98	47.387	ENSAPEG00000005452	pusl1	95	47.387	Amphiprion_percula
MGP_PahariEiJ_G0029260	Pusl1	94	49.281	ENSATEG00000024154	pusl1	92	49.281	Anabas_testudineus
MGP_PahariEiJ_G0029260	Pusl1	94	53.069	ENSAPLG00000004946	PUSL1	92	53.069	Anas_platyrhynchos
MGP_PahariEiJ_G0029260	Pusl1	87	53.906	ENSACAG00000014111	PUSL1	96	53.906	Anolis_carolinensis
MGP_PahariEiJ_G0029260	Pusl1	100	79.725	ENSANAG00000037456	PUSL1	96	79.725	Aotus_nancymaae
MGP_PahariEiJ_G0029260	Pusl1	95	48.754	ENSACLG00000008675	pusl1	94	47.410	Astatotilapia_calliptera
MGP_PahariEiJ_G0029260	Pusl1	94	50.000	ENSAMXG00000044007	pusl1	93	50.000	Astyanax_mexicanus
MGP_PahariEiJ_G0029260	Pusl1	97	81.139	ENSBTAG00000007619	PUSL1	97	81.139	Bos_taurus
MGP_PahariEiJ_G0029260	Pusl1	100	79.725	ENSCJAG00000010972	PUSL1	96	79.725	Callithrix_jacchus
MGP_PahariEiJ_G0029260	Pusl1	97	78.092	ENSCAFG00000019291	PUSL1	93	78.092	Canis_familiaris
MGP_PahariEiJ_G0029260	Pusl1	97	80.212	ENSCAFG00020011568	PUSL1	92	80.212	Canis_lupus_dingo
MGP_PahariEiJ_G0029260	Pusl1	97	82.206	ENSCHIG00000012615	PUSL1	98	82.206	Capra_hircus
MGP_PahariEiJ_G0029260	Pusl1	97	77.739	ENSCPOG00000005149	PUSL1	92	77.739	Cavia_porcellus
MGP_PahariEiJ_G0029260	Pusl1	100	80.756	ENSCCAG00000027475	PUSL1	96	80.756	Cebus_capucinus
MGP_PahariEiJ_G0029260	Pusl1	100	79.725	ENSCATG00000018260	PUSL1	96	79.725	Cercocebus_atys
MGP_PahariEiJ_G0029260	Pusl1	97	78.445	ENSCLAG00000005232	PUSL1	93	78.445	Chinchilla_lanigera
MGP_PahariEiJ_G0029260	Pusl1	100	80.069	ENSCSAG00000000680	PUSL1	96	80.069	Chlorocebus_sabaeus
MGP_PahariEiJ_G0029260	Pusl1	96	53.004	ENSCPBG00000022621	PUSL1	96	53.004	Chrysemys_picta_bellii
MGP_PahariEiJ_G0029260	Pusl1	100	80.069	ENSCANG00000034373	PUSL1	96	80.069	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0029260	Pusl1	100	87.629	ENSCGRG00001012429	Pusl1	100	87.629	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0029260	Pusl1	100	87.629	ENSCGRG00000006466	Pusl1	100	87.629	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0029260	Pusl1	94	51.254	ENSCSEG00000005159	pusl1	92	51.254	Cynoglossus_semilaevis
MGP_PahariEiJ_G0029260	Pusl1	80	45.299	ENSCVAG00000012923	pusl1	90	45.299	Cyprinodon_variegatus
MGP_PahariEiJ_G0029260	Pusl1	95	48.746	ENSDARG00000074565	pusl1	97	48.746	Danio_rerio
MGP_PahariEiJ_G0029260	Pusl1	93	32.890	FBgn0083976	CG34140	98	32.890	Drosophila_melanogaster
MGP_PahariEiJ_G0029260	Pusl1	99	80.208	ENSECAG00000006248	PUSL1	95	80.208	Equus_caballus
MGP_PahariEiJ_G0029260	Pusl1	98	76.125	ENSEEUG00000000837	PUSL1	97	76.125	Erinaceus_europaeus
MGP_PahariEiJ_G0029260	Pusl1	94	49.275	ENSELUG00000015945	pusl1	94	49.275	Esox_lucius
MGP_PahariEiJ_G0029260	Pusl1	98	79.371	ENSFCAG00000007617	PUSL1	95	79.371	Felis_catus
MGP_PahariEiJ_G0029260	Pusl1	95	52.158	ENSFHEG00000006370	pusl1	92	52.158	Fundulus_heteroclitus
MGP_PahariEiJ_G0029260	Pusl1	94	51.429	ENSGMOG00000019388	pusl1	98	51.429	Gadus_morhua
MGP_PahariEiJ_G0029260	Pusl1	96	52.669	ENSGALG00000001714	PUSL1	96	52.669	Gallus_gallus
MGP_PahariEiJ_G0029260	Pusl1	95	51.429	ENSGAFG00000007546	pusl1	95	51.429	Gambusia_affinis
MGP_PahariEiJ_G0029260	Pusl1	95	47.670	ENSGACG00000007848	pusl1	91	47.670	Gasterosteus_aculeatus
MGP_PahariEiJ_G0029260	Pusl1	96	53.357	ENSGAGG00000004730	PUSL1	96	53.357	Gopherus_agassizii
MGP_PahariEiJ_G0029260	Pusl1	85	80.894	ENSGGOG00000005364	PUSL1	95	80.894	Gorilla_gorilla
MGP_PahariEiJ_G0029260	Pusl1	95	48.571	ENSHBUG00000001264	pusl1	92	48.571	Haplochromis_burtoni
MGP_PahariEiJ_G0029260	Pusl1	99	76.471	ENSHGLG00000017570	PUSL1	94	76.471	Heterocephalus_glaber_female
MGP_PahariEiJ_G0029260	Pusl1	90	77.652	ENSHGLG00100007641	PUSL1	87	77.652	Heterocephalus_glaber_male
MGP_PahariEiJ_G0029260	Pusl1	95	51.418	ENSHCOG00000010077	pusl1	99	51.095	Hippocampus_comes
MGP_PahariEiJ_G0029260	Pusl1	96	49.110	ENSIPUG00000023921	pusl1	96	49.110	Ictalurus_punctatus
MGP_PahariEiJ_G0029260	Pusl1	99	81.185	ENSSTOG00000001783	PUSL1	90	81.185	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0029260	Pusl1	100	82.474	ENSJJAG00000020471	Pusl1	99	82.877	Jaculus_jaculus
MGP_PahariEiJ_G0029260	Pusl1	90	47.727	ENSKMAG00000005154	pusl1	89	47.727	Kryptolebias_marmoratus
MGP_PahariEiJ_G0029260	Pusl1	94	50.545	ENSLBEG00000013469	pusl1	94	50.545	Labrus_bergylta
MGP_PahariEiJ_G0029260	Pusl1	66	53.093	ENSLACG00000018795	PUSL1	95	53.093	Latimeria_chalumnae
MGP_PahariEiJ_G0029260	Pusl1	96	47.857	ENSLOCG00000002210	pusl1	95	47.857	Lepisosteus_oculatus
MGP_PahariEiJ_G0029260	Pusl1	90	78.707	ENSLAFG00000013685	PUSL1	99	78.707	Loxodonta_africana
MGP_PahariEiJ_G0029260	Pusl1	100	80.069	ENSMFAG00000046288	PUSL1	96	80.069	Macaca_fascicularis
MGP_PahariEiJ_G0029260	Pusl1	100	71.134	ENSMMUG00000016279	PUSL1	96	71.134	Macaca_mulatta
MGP_PahariEiJ_G0029260	Pusl1	100	80.069	ENSMNEG00000037989	PUSL1	96	80.069	Macaca_nemestrina
MGP_PahariEiJ_G0029260	Pusl1	94	49.104	ENSMAMG00000016538	pusl1	91	49.104	Mastacembelus_armatus
MGP_PahariEiJ_G0029260	Pusl1	95	48.754	ENSMZEG00005026990	pusl1	96	45.357	Maylandia_zebra
MGP_PahariEiJ_G0029260	Pusl1	96	52.650	ENSMGAG00000003037	PUSL1	96	52.650	Meleagris_gallopavo
MGP_PahariEiJ_G0029260	Pusl1	100	87.973	ENSMAUG00000019924	Pusl1	100	87.973	Mesocricetus_auratus
MGP_PahariEiJ_G0029260	Pusl1	99	79.514	ENSMICG00000014171	PUSL1	98	79.514	Microcebus_murinus
MGP_PahariEiJ_G0029260	Pusl1	100	88.660	ENSMOCG00000005602	Pusl1	100	88.660	Microtus_ochrogaster
MGP_PahariEiJ_G0029260	Pusl1	95	47.312	ENSMMOG00000003269	pusl1	99	46.786	Mola_mola
MGP_PahariEiJ_G0029260	Pusl1	94	48.201	ENSMALG00000021686	pusl1	91	48.201	Monopterus_albus
MGP_PahariEiJ_G0029260	Pusl1	100	97.251	MGP_CAROLIEiJ_G0026911	Pusl1	100	97.251	Mus_caroli
MGP_PahariEiJ_G0029260	Pusl1	100	96.220	ENSMUSG00000051557	Pusl1	100	96.220	Mus_musculus
MGP_PahariEiJ_G0029260	Pusl1	100	96.220	MGP_SPRETEiJ_G0027906	Pusl1	100	96.220	Mus_spretus
MGP_PahariEiJ_G0029260	Pusl1	99	78.125	ENSMPUG00000014313	PUSL1	94	78.125	Mustela_putorius_furo
MGP_PahariEiJ_G0029260	Pusl1	99	84.429	ENSNGAG00000004647	Pusl1	87	84.429	Nannospalax_galili
MGP_PahariEiJ_G0029260	Pusl1	86	47.410	ENSNBRG00000014762	pusl1	91	47.410	Neolamprologus_brichardi
MGP_PahariEiJ_G0029260	Pusl1	91	80.377	ENSNLEG00000000051	PUSL1	96	80.377	Nomascus_leucogenys
MGP_PahariEiJ_G0029260	Pusl1	97	65.018	ENSMEUG00000011649	-	99	65.018	Notamacropus_eugenii
MGP_PahariEiJ_G0029260	Pusl1	94	51.273	ENSMEUG00000005176	-	99	51.273	Notamacropus_eugenii
MGP_PahariEiJ_G0029260	Pusl1	99	75.000	ENSODEG00000008247	PUSL1	92	75.000	Octodon_degus
MGP_PahariEiJ_G0029260	Pusl1	99	48.822	ENSONIG00000019361	pusl1	99	48.822	Oreochromis_niloticus
MGP_PahariEiJ_G0029260	Pusl1	94	48.201	ENSORLG00000016228	pusl1	93	48.201	Oryzias_latipes
MGP_PahariEiJ_G0029260	Pusl1	94	48.921	ENSORLG00020013710	pusl1	93	48.921	Oryzias_latipes_hni
MGP_PahariEiJ_G0029260	Pusl1	95	47.872	ENSORLG00015008715	pusl1	98	47.872	Oryzias_latipes_hsok
MGP_PahariEiJ_G0029260	Pusl1	94	48.913	ENSOMEG00000018897	pusl1	94	48.913	Oryzias_melastigma
MGP_PahariEiJ_G0029260	Pusl1	97	80.851	ENSOGAG00000031692	PUSL1	98	80.851	Otolemur_garnettii
MGP_PahariEiJ_G0029260	Pusl1	91	80.827	ENSOARG00000004905	PUSL1	100	80.827	Ovis_aries
MGP_PahariEiJ_G0029260	Pusl1	100	79.038	ENSPPAG00000029283	PUSL1	96	79.038	Pan_paniscus
MGP_PahariEiJ_G0029260	Pusl1	98	79.021	ENSPPRG00000023329	PUSL1	95	79.021	Panthera_pardus
MGP_PahariEiJ_G0029260	Pusl1	90	79.389	ENSPTIG00000018532	PUSL1	97	79.389	Panthera_tigris_altaica
MGP_PahariEiJ_G0029260	Pusl1	100	79.038	ENSPTRG00000000021	PUSL1	96	79.038	Pan_troglodytes
MGP_PahariEiJ_G0029260	Pusl1	100	79.725	ENSPANG00000000591	PUSL1	96	79.725	Papio_anubis
MGP_PahariEiJ_G0029260	Pusl1	95	48.561	ENSPKIG00000002447	pusl1	96	48.561	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0029260	Pusl1	85	56.400	ENSPSIG00000002781	PUSL1	92	56.400	Pelodiscus_sinensis
MGP_PahariEiJ_G0029260	Pusl1	96	46.454	ENSPMGG00000011051	pusl1	99	46.209	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0029260	Pusl1	100	90.034	ENSPEMG00000013541	Pusl1	100	90.034	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0029260	Pusl1	99	64.483	ENSPCIG00000007816	-	66	64.483	Phascolarctos_cinereus
MGP_PahariEiJ_G0029260	Pusl1	94	53.763	ENSPFOG00000015448	pusl1	91	53.763	Poecilia_formosa
MGP_PahariEiJ_G0029260	Pusl1	95	53.571	ENSPLAG00000004348	pusl1	93	53.571	Poecilia_latipinna
MGP_PahariEiJ_G0029260	Pusl1	95	53.571	ENSPMEG00000000931	pusl1	93	53.571	Poecilia_mexicana
MGP_PahariEiJ_G0029260	Pusl1	95	53.237	ENSPREG00000002324	pusl1	93	53.237	Poecilia_reticulata
MGP_PahariEiJ_G0029260	Pusl1	86	77.600	ENSPPYG00000002014	PUSL1	90	77.600	Pongo_abelii
MGP_PahariEiJ_G0029260	Pusl1	84	67.490	ENSPCAG00000002272	PUSL1	99	67.490	Procavia_capensis
MGP_PahariEiJ_G0029260	Pusl1	74	83.333	ENSPVAG00000001016	PUSL1	71	83.333	Pteropus_vampyrus
MGP_PahariEiJ_G0029260	Pusl1	81	48.750	ENSPNYG00000006588	pusl1	98	48.750	Pundamilia_nyererei
MGP_PahariEiJ_G0029260	Pusl1	96	50.000	ENSPNAG00000024441	pusl1	96	50.000	Pygocentrus_nattereri
MGP_PahariEiJ_G0029260	Pusl1	100	94.502	ENSRNOG00000022354	Pusl1	100	94.502	Rattus_norvegicus
MGP_PahariEiJ_G0029260	Pusl1	100	80.069	ENSRBIG00000036842	PUSL1	96	80.069	Rhinopithecus_bieti
MGP_PahariEiJ_G0029260	Pusl1	100	79.725	ENSRROG00000030704	PUSL1	96	79.725	Rhinopithecus_roxellana
MGP_PahariEiJ_G0029260	Pusl1	91	78.868	ENSSBOG00000032249	PUSL1	96	78.868	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0029260	Pusl1	52	62.667	ENSSHAG00000004840	-	85	58.537	Sarcophilus_harrisii
MGP_PahariEiJ_G0029260	Pusl1	97	49.474	ENSSFOG00015008281	pusl1	94	49.474	Scleropages_formosus
MGP_PahariEiJ_G0029260	Pusl1	98	47.079	ENSSMAG00000007187	pusl1	93	47.079	Scophthalmus_maximus
MGP_PahariEiJ_G0029260	Pusl1	98	47.959	ENSSDUG00000000287	pusl1	99	45.051	Seriola_dumerili
MGP_PahariEiJ_G0029260	Pusl1	95	49.643	ENSSLDG00000009605	pusl1	88	49.643	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0029260	Pusl1	65	76.596	ENSSARG00000005323	-	100	76.596	Sorex_araneus
MGP_PahariEiJ_G0029260	Pusl1	98	42.568	ENSSPAG00000002528	pusl1	99	45.091	Stegastes_partitus
MGP_PahariEiJ_G0029260	Pusl1	100	78.694	ENSSSCG00000003338	PUSL1	95	78.694	Sus_scrofa
MGP_PahariEiJ_G0029260	Pusl1	93	53.623	ENSTGUG00000003214	PUSL1	100	52.962	Taeniopygia_guttata
MGP_PahariEiJ_G0029260	Pusl1	95	47.143	ENSTRUG00000010102	pusl1	93	47.143	Takifugu_rubripes
MGP_PahariEiJ_G0029260	Pusl1	62	43.956	ENSTNIG00000005789	pusl1	81	43.956	Tetraodon_nigroviridis
MGP_PahariEiJ_G0029260	Pusl1	86	76.757	ENSTBEG00000005001	PUSL1	96	76.757	Tupaia_belangeri
MGP_PahariEiJ_G0029260	Pusl1	98	71.080	ENSTTRG00000017030	PUSL1	95	71.080	Tursiops_truncatus
MGP_PahariEiJ_G0029260	Pusl1	84	79.098	ENSUAMG00000012801	PUSL1	81	79.098	Ursus_americanus
MGP_PahariEiJ_G0029260	Pusl1	84	78.689	ENSUMAG00000002084	PUSL1	81	78.689	Ursus_maritimus
MGP_PahariEiJ_G0029260	Pusl1	98	79.371	ENSVVUG00000004320	PUSL1	93	70.186	Vulpes_vulpes
MGP_PahariEiJ_G0029260	Pusl1	78	49.561	ENSXETG00000011145	pusl1	99	49.561	Xenopus_tropicalis
MGP_PahariEiJ_G0029260	Pusl1	95	51.254	ENSXCOG00000017748	pusl1	98	51.254	Xiphophorus_couchianus
MGP_PahariEiJ_G0029260	Pusl1	95	52.878	ENSXMAG00000018846	pusl1	93	52.878	Xiphophorus_maculatus