EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0029306 (Gene tree)
Gene ID: 110324844
Gene Symbol: Cad
Alias: 2410008J01Rik
Full Name: carbamoyl-phosphate synthetase 2%2C aspartate transcarbamylase%2C and dihydroorotase
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Minus strand
Length: 23759 bases
Position: chr7:1602401-1626159
Accession: 110324844
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0081766	RimK	PF08443.11	1.5e-05	1	1
MGP_PahariEiJ_P0081765	RimK	PF08443.11	1.5e-05	1	1
MGP_PahariEiJ_P0081767	RimK	PF08443.11	7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0081777	-	646	-	-	- (aa)	-	-
MGP_PahariEiJ_T0081770	-	836	-	-	- (aa)	-	-
MGP_PahariEiJ_T0081771	-	772	-	-	- (aa)	-	-
MGP_PahariEiJ_T0081769	-	582	-	MGP_PahariEiJ_P0081769	194 (aa)	-	-
MGP_PahariEiJ_T0081768	-	555	-	-	- (aa)	-	-
MGP_PahariEiJ_T0081772	-	792	-	-	- (aa)	-	-
MGP_PahariEiJ_T0081774	-	3153	-	MGP_PahariEiJ_P0081774	971 (aa)	-	-
MGP_PahariEiJ_T0081775	-	342	-	-	- (aa)	-	-
MGP_PahariEiJ_T0081776	-	710	-	-	- (aa)	-	-
MGP_PahariEiJ_T0081773	-	589	-	-	- (aa)	-	-
MGP_PahariEiJ_T0081767	-	6489	XM_021202559	MGP_PahariEiJ_P0081767	2162 (aa)	XP_021058218	UPI000A307B0C
MGP_PahariEiJ_T0081766	-	6529	XM_021202560	MGP_PahariEiJ_P0081766	2154 (aa)	XP_021058219	UPI000A30D707
MGP_PahariEiJ_T0081765	-	6559	XM_021202558	MGP_PahariEiJ_P0081765	2164 (aa)	XP_021058217	UPI000A30C66F
MGP_PahariEiJ_T0081764	-	7133	XM_021202557	MGP_PahariEiJ_P0081764	2225 (aa)	XP_021058216	UPI000A30E23A

Gene Model

Click here to download MGP_PahariEiJ_G0029306's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0029306's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0029306	Cad	99	85.340	ENSACIG00000001012	cad	97	80.488	Amphilophus_citrinellus
MGP_PahariEiJ_G0029306	Cad	100	95.385	ENSANAG00000022610	CAD	100	94.820	Aotus_nancymaae
MGP_PahariEiJ_G0029306	Cad	99	83.770	ENSACLG00000002358	cad	97	83.770	Astatotilapia_calliptera
MGP_PahariEiJ_G0029306	Cad	100	95.385	ENSCJAG00000001126	CAD	100	94.866	Callithrix_jacchus
MGP_PahariEiJ_G0029306	Cad	99	93.478	ENSCAFG00000004767	CAD	100	93.478	Canis_familiaris
MGP_PahariEiJ_G0029306	Cad	100	95.385	ENSCAFG00020024313	CAD	100	96.373	Canis_lupus_dingo
MGP_PahariEiJ_G0029306	Cad	100	96.923	ENSCHIG00000022371	CAD	100	95.097	Capra_hircus
MGP_PahariEiJ_G0029306	Cad	100	95.897	ENSCCAG00000037042	CAD	100	94.820	Cebus_capucinus
MGP_PahariEiJ_G0029306	Cad	100	96.923	ENSCATG00000029790	CAD	100	94.866	Cercocebus_atys
MGP_PahariEiJ_G0029306	Cad	100	78.197	ENSCPBG00000019255	CAD	100	78.243	Chrysemys_picta_bellii
MGP_PahariEiJ_G0029306	Cad	100	96.410	ENSCANG00000033265	CAD	100	94.542	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0029306	Cad	100	97.873	ENSCGRG00001017687	Cad	100	97.873	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0029306	Cad	100	97.873	ENSCGRG00000008756	Cad	100	97.873	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0029306	Cad	99	73.469	ENSDARG00000041895	cad	99	73.586	Danio_rerio
MGP_PahariEiJ_G0029306	Cad	100	96.923	ENSEASG00005009550	CAD	100	97.927	Equus_asinus_asinus
MGP_PahariEiJ_G0029306	Cad	90	79.282	ENSGAGG00000008166	CAD	96	79.226	Gopherus_agassizii
MGP_PahariEiJ_G0029306	Cad	100	96.923	ENSGGOG00000011620	CAD	100	94.783	Gorilla_gorilla
MGP_PahariEiJ_G0029306	Cad	100	96.007	ENSSTOG00000011317	CAD	100	96.007	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0029306	Cad	100	96.410	ENSJJAG00000022080	Cad	100	96.410	Jaculus_jaculus
MGP_PahariEiJ_G0029306	Cad	96	77.065	ENSKMAG00000012829	cad	99	76.844	Kryptolebias_marmoratus
MGP_PahariEiJ_G0029306	Cad	100	96.923	ENSMFAG00000036356	CAD	100	94.912	Macaca_fascicularis
MGP_PahariEiJ_G0029306	Cad	100	96.923	ENSMMUG00000010269	ATRAID	100	94.820	Macaca_mulatta
MGP_PahariEiJ_G0029306	Cad	100	96.923	ENSMLEG00000031669	CAD	100	94.912	Mandrillus_leucophaeus
MGP_PahariEiJ_G0029306	Cad	99	83.770	ENSMZEG00005019557	cad	97	83.770	Maylandia_zebra
MGP_PahariEiJ_G0029306	Cad	100	98.196	ENSMAUG00000003111	Cad	100	98.196	Mesocricetus_auratus
MGP_PahariEiJ_G0029306	Cad	100	95.897	ENSMICG00000017084	CAD	100	94.958	Microcebus_murinus
MGP_PahariEiJ_G0029306	Cad	100	98.427	ENSMOCG00000004643	Cad	100	98.427	Microtus_ochrogaster
MGP_PahariEiJ_G0029306	Cad	99	95.152	ENSMODG00000015693	CAD	97	95.152	Monodelphis_domestica
MGP_PahariEiJ_G0029306	Cad	100	96.923	ENSNGAG00000010023	Cad	100	96.923	Nannospalax_galili
MGP_PahariEiJ_G0029306	Cad	99	84.293	ENSONIG00000015784	cad	97	84.293	Oreochromis_niloticus
MGP_PahariEiJ_G0029306	Cad	73	96.622	ENSOANG00000003933	CAD	88	96.622	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0029306	Cad	100	96.923	ENSPPAG00000041472	CAD	100	94.829	Pan_paniscus
MGP_PahariEiJ_G0029306	Cad	100	95.897	ENSPPRG00000000884	CAD	100	95.097	Panthera_pardus
MGP_PahariEiJ_G0029306	Cad	100	96.923	ENSPTRG00000011756	CAD	100	94.875	Pan_troglodytes
MGP_PahariEiJ_G0029306	Cad	100	96.923	ENSPANG00000015738	CAD	100	94.912	Papio_anubis
MGP_PahariEiJ_G0029306	Cad	99	85.567	ENSPKIG00000015585	cad	99	75.681	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0029306	Cad	100	97.949	ENSPEMG00000007285	Cad	100	97.949	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0029306	Cad	100	91.073	ENSPCIG00000012616	CAD	100	91.073	Phascolarctos_cinereus
MGP_PahariEiJ_G0029306	Cad	100	95.897	ENSPCOG00000023312	CAD	100	94.917	Propithecus_coquereli
MGP_PahariEiJ_G0029306	Cad	100	96.923	ENSRBIG00000022214	CAD	100	94.727	Rhinopithecus_bieti
MGP_PahariEiJ_G0029306	Cad	100	96.923	ENSRROG00000036713	CAD	100	94.727	Rhinopithecus_roxellana
MGP_PahariEiJ_G0029306	Cad	100	96.410	ENSSBOG00000033880	CAD	100	94.450	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0029306	Cad	100	93.846	ENSSHAG00000012598	CAD	97	93.846	Sarcophilus_harrisii
MGP_PahariEiJ_G0029306	Cad	99	85.340	ENSSDUG00000003396	cad	97	85.340	Seriola_dumerili
MGP_PahariEiJ_G0029306	Cad	99	85.864	ENSSLDG00000007917	cad	97	85.864	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0029306	Cad	100	95.897	ENSUAMG00000006932	CAD	100	96.891	Ursus_americanus
MGP_PahariEiJ_G0029306	Cad	99	95.897	ENSUMAG00000020632	CAD	96	95.897	Ursus_maritimus
MGP_PahariEiJ_G0029306	Cad	83	88.718	ENSXETG00000016401	cad	96	88.718	Xenopus_tropicalis