EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0029659 (Gene tree)
Gene ID: 110324315
Gene Symbol: Srsf5
Alias: Sfrs5
Full Name: serine and arginine rich splicing factor 5
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 5051 bases
Position: chr7:76145823-76150873
Accession: 110324315
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0082782	RRM_1	PF00076.22	1.6e-30	1	2
MGP_PahariEiJ_P0082782	RRM_1	PF00076.22	1.6e-30	2	2
MGP_PahariEiJ_P0082786	RRM_1	PF00076.22	1.6e-30	1	2
MGP_PahariEiJ_P0082786	RRM_1	PF00076.22	1.6e-30	2	2
MGP_PahariEiJ_P0082791	RRM_1	PF00076.22	1.6e-30	1	2
MGP_PahariEiJ_P0082791	RRM_1	PF00076.22	1.6e-30	2	2
MGP_PahariEiJ_P0082784	RRM_1	PF00076.22	1.6e-30	1	2
MGP_PahariEiJ_P0082784	RRM_1	PF00076.22	1.6e-30	2	2
MGP_PahariEiJ_P0082787	RRM_1	PF00076.22	1.6e-30	1	2
MGP_PahariEiJ_P0082787	RRM_1	PF00076.22	1.6e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0082792	-	3064	-	-	- (aa)	-	-
MGP_PahariEiJ_T0082791	-	1574	XM_021201775	MGP_PahariEiJ_P0082791	269 (aa)	XP_021057434	UPI0000021B17
MGP_PahariEiJ_T0082784	-	1527	XM_021201773	MGP_PahariEiJ_P0082784	270 (aa)	XP_021057429	UPI00000E7771
MGP_PahariEiJ_T0082785	-	2504	-	-	- (aa)	-	-
MGP_PahariEiJ_T0082786	-	1508	-	MGP_PahariEiJ_P0082786	269 (aa)	-	UPI0000021B17
MGP_PahariEiJ_T0082787	-	1515	XM_021201773	MGP_PahariEiJ_P0082787	270 (aa)	XP_021057429	UPI00000E7771
MGP_PahariEiJ_T0082790	-	469	-	-	- (aa)	-	-
MGP_PahariEiJ_T0082782	-	1544	XM_021201772	MGP_PahariEiJ_P0082782	269 (aa)	XP_021057431	UPI0000021B17
MGP_PahariEiJ_T0082783	-	2707	-	-	- (aa)	-	-
MGP_PahariEiJ_T0082788	-	550	-	-	- (aa)	-	-
MGP_PahariEiJ_T0082789	-	897	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PahariEiJ_G0029659's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0029659's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PahariEiJ_G0029659	Srsf5	70	42.000	MGP_PahariEiJ_G0018074	Srsf1	80	42.157
MGP_PahariEiJ_G0029659	Srsf5	67	64.130	MGP_PahariEiJ_G0026050	Srsf6	66	55.804

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0029659	Srsf5	100	98.162	ENSG00000100650	SRSF5	100	100.000	Homo_sapiens
MGP_PahariEiJ_G0029659	Srsf5	92	68.605	ENSAPOG00000008642	srsf5b	63	85.405	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0029659	Srsf5	100	98.162	ENSAMEG00000014574	SRSF5	100	98.162	Ailuropoda_melanoleuca
MGP_PahariEiJ_G0029659	Srsf5	93	70.301	ENSACIG00000010742	srsf5b	81	75.969	Amphilophus_citrinellus
MGP_PahariEiJ_G0029659	Srsf5	97	67.041	ENSAOCG00000005719	srsf5b	63	85.405	Amphiprion_ocellaris
MGP_PahariEiJ_G0029659	Srsf5	97	67.041	ENSAPEG00000007830	srsf5b	63	85.405	Amphiprion_percula
MGP_PahariEiJ_G0029659	Srsf5	93	67.308	ENSATEG00000019112	srsf5b	63	82.258	Anabas_testudineus
MGP_PahariEiJ_G0029659	Srsf5	98	93.208	ENSAPLG00000014681	SRSF5	67	94.444	Anas_platyrhynchos
MGP_PahariEiJ_G0029659	Srsf5	100	95.203	ENSACAG00000005143	SRSF5	67	98.889	Anolis_carolinensis
MGP_PahariEiJ_G0029659	Srsf5	100	98.155	ENSANAG00000027977	-	100	100.000	Aotus_nancymaae
MGP_PahariEiJ_G0029659	Srsf5	93	70.566	ENSACLG00000026424	srsf5b	63	84.324	Astatotilapia_calliptera
MGP_PahariEiJ_G0029659	Srsf5	92	66.923	ENSAMXG00000011932	srsf5b	84	80.000	Astyanax_mexicanus
MGP_PahariEiJ_G0029659	Srsf5	100	98.162	ENSBTAG00000011596	SRSF5	100	98.162	Bos_taurus
MGP_PahariEiJ_G0029659	Srsf5	100	98.162	ENSCJAG00000014884	SRSF5	100	100.000	Callithrix_jacchus
MGP_PahariEiJ_G0029659	Srsf5	100	98.162	ENSCAFG00000016589	SRSF5	100	98.162	Canis_familiaris
MGP_PahariEiJ_G0029659	Srsf5	100	98.162	ENSCAFG00020005661	SRSF5	100	98.162	Canis_lupus_dingo
MGP_PahariEiJ_G0029659	Srsf5	100	97.445	ENSCHIG00000016794	SRSF5	100	97.445	Capra_hircus
MGP_PahariEiJ_G0029659	Srsf5	100	98.175	ENSTSYG00000007786	SRSF5	100	100.000	Carlito_syrichta
MGP_PahariEiJ_G0029659	Srsf5	100	97.445	ENSCAPG00000008801	SRSF5	100	97.445	Cavia_aperea
MGP_PahariEiJ_G0029659	Srsf5	100	97.080	ENSCPOG00000039926	SRSF5	100	97.080	Cavia_porcellus
MGP_PahariEiJ_G0029659	Srsf5	100	98.162	ENSCCAG00000029002	SRSF5	100	100.000	Cebus_capucinus
MGP_PahariEiJ_G0029659	Srsf5	100	97.794	ENSCATG00000045051	SRSF5	100	100.000	Cercocebus_atys
MGP_PahariEiJ_G0029659	Srsf5	100	97.426	ENSCLAG00000004755	SRSF5	100	97.426	Chinchilla_lanigera
MGP_PahariEiJ_G0029659	Srsf5	100	98.162	ENSCSAG00000013041	SRSF5	100	98.162	Chlorocebus_sabaeus
MGP_PahariEiJ_G0029659	Srsf5	100	95.926	ENSCPBG00000021653	SRSF5	100	95.926	Chrysemys_picta_bellii
MGP_PahariEiJ_G0029659	Srsf5	100	98.162	ENSCANG00000030560	SRSF5	100	100.000	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0029659	Srsf5	100	100.000	ENSCGRG00001015339	Srsf5	100	100.000	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0029659	Srsf5	100	100.000	ENSCGRG00000009833	Srsf5	100	100.000	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0029659	Srsf5	89	76.000	ENSCSEG00000003801	srsf5b	64	82.353	Cynoglossus_semilaevis
MGP_PahariEiJ_G0029659	Srsf5	68	82.540	ENSCVAG00000017240	srsf5b	68	76.471	Cyprinodon_variegatus
MGP_PahariEiJ_G0029659	Srsf5	67	82.418	ENSDARG00000027734	srsf5b	90	82.400	Danio_rerio
MGP_PahariEiJ_G0029659	Srsf5	100	98.519	ENSDNOG00000006160	SRSF5	100	98.519	Dasypus_novemcinctus
MGP_PahariEiJ_G0029659	Srsf5	100	98.885	ENSDORG00000003989	Srsf5	100	98.885	Dipodomys_ordii
MGP_PahariEiJ_G0029659	Srsf5	100	88.519	ENSETEG00000020396	SRSF5	88	90.336	Echinops_telfairi
MGP_PahariEiJ_G0029659	Srsf5	89	58.848	ENSEBUG00000006229	srsf5b	68	65.730	Eptatretus_burgeri
MGP_PahariEiJ_G0029659	Srsf5	100	98.162	ENSEASG00005016615	SRSF5	100	98.162	Equus_asinus_asinus
MGP_PahariEiJ_G0029659	Srsf5	100	97.794	ENSECAG00000026873	SRSF5	100	97.794	Equus_caballus
MGP_PahariEiJ_G0029659	Srsf5	68	78.866	ENSELUG00000019852	srsf5b	85	69.863	Esox_lucius
MGP_PahariEiJ_G0029659	Srsf5	100	98.162	ENSFCAG00000008848	SRSF5	99	100.000	Felis_catus
MGP_PahariEiJ_G0029659	Srsf5	67	95.531	ENSFALG00000004979	SRSF5	67	94.972	Ficedula_albicollis
MGP_PahariEiJ_G0029659	Srsf5	100	98.519	ENSFDAG00000011562	SRSF5	100	98.519	Fukomys_damarensis
MGP_PahariEiJ_G0029659	Srsf5	96	70.758	ENSFHEG00000009476	srsf5b	60	84.324	Fundulus_heteroclitus
MGP_PahariEiJ_G0029659	Srsf5	68	67.257	ENSGMOG00000000595	srsf5b	97	67.117	Gadus_morhua
MGP_PahariEiJ_G0029659	Srsf5	100	94.424	ENSGALG00000009421	SRSF5	90	90.323	Gallus_gallus
MGP_PahariEiJ_G0029659	Srsf5	67	61.134	ENSGACG00000007834	srsf5b	86	71.324	Gasterosteus_aculeatus
MGP_PahariEiJ_G0029659	Srsf5	100	95.926	ENSGAGG00000004447	SRSF5	100	95.926	Gopherus_agassizii
MGP_PahariEiJ_G0029659	Srsf5	100	98.162	ENSGGOG00000016462	SRSF5	100	100.000	Gorilla_gorilla
MGP_PahariEiJ_G0029659	Srsf5	93	70.189	ENSHBUG00000012462	srsf5b	93	75.000	Haplochromis_burtoni
MGP_PahariEiJ_G0029659	Srsf5	100	98.519	ENSHGLG00000010147	SRSF5	100	98.519	Heterocephalus_glaber_female
MGP_PahariEiJ_G0029659	Srsf5	100	66.421	ENSHGLG00100000095	-	62	65.517	Heterocephalus_glaber_male
MGP_PahariEiJ_G0029659	Srsf5	100	98.519	ENSHGLG00100015328	SRSF5	100	98.519	Heterocephalus_glaber_male
MGP_PahariEiJ_G0029659	Srsf5	68	75.521	ENSHCOG00000005592	srsf5b	64	77.128	Hippocampus_comes
MGP_PahariEiJ_G0029659	Srsf5	100	98.889	ENSSTOG00000020672	SRSF5	100	98.889	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0029659	Srsf5	100	98.529	ENSJJAG00000001688	Srsf5	100	98.529	Jaculus_jaculus
MGP_PahariEiJ_G0029659	Srsf5	93	72.243	ENSKMAG00000020486	srsf5b	84	79.528	Kryptolebias_marmoratus
MGP_PahariEiJ_G0029659	Srsf5	68	82.723	ENSLBEG00000013647	srsf5b	63	82.353	Labrus_bergylta
MGP_PahariEiJ_G0029659	Srsf5	89	84.711	ENSLACG00000005874	SRSF5	67	90.608	Latimeria_chalumnae
MGP_PahariEiJ_G0029659	Srsf5	100	70.290	ENSLOCG00000012438	srsf5b	69	82.703	Lepisosteus_oculatus
MGP_PahariEiJ_G0029659	Srsf5	100	97.426	ENSLAFG00000005260	SRSF5	100	97.426	Loxodonta_africana
MGP_PahariEiJ_G0029659	Srsf5	100	98.162	ENSMFAG00000002393	SRSF5	100	100.000	Macaca_fascicularis
MGP_PahariEiJ_G0029659	Srsf5	100	98.162	ENSMNEG00000030872	SRSF5	100	100.000	Macaca_nemestrina
MGP_PahariEiJ_G0029659	Srsf5	100	97.794	ENSMLEG00000030017	SRSF5	100	100.000	Mandrillus_leucophaeus
MGP_PahariEiJ_G0029659	Srsf5	87	74.494	ENSMAMG00000002673	srsf5b	63	80.978	Mastacembelus_armatus
MGP_PahariEiJ_G0029659	Srsf5	93	70.566	ENSMZEG00005003550	srsf5b	63	84.324	Maylandia_zebra
MGP_PahariEiJ_G0029659	Srsf5	75	91.045	ENSMGAG00000011835	SRSF5	62	91.429	Meleagris_gallopavo
MGP_PahariEiJ_G0029659	Srsf5	100	100.000	ENSMAUG00000009544	Srsf5	100	100.000	Mesocricetus_auratus
MGP_PahariEiJ_G0029659	Srsf5	100	98.885	ENSMICG00000037432	-	100	100.000	Microcebus_murinus
MGP_PahariEiJ_G0029659	Srsf5	100	99.630	ENSMOCG00000013134	Srsf5	100	99.630	Microtus_ochrogaster
MGP_PahariEiJ_G0029659	Srsf5	67	81.622	ENSMMOG00000000137	srsf5b	93	61.538	Mola_mola
MGP_PahariEiJ_G0029659	Srsf5	67	99.441	ENSMODG00000011362	SRSF5	67	99.441	Monodelphis_domestica
MGP_PahariEiJ_G0029659	Srsf5	68	83.684	ENSMALG00000021875	srsf5b	84	75.194	Monopterus_albus
MGP_PahariEiJ_G0029659	Srsf5	100	100.000	ENSMUSG00000021134	Srsf5	100	100.000	Mus_musculus
MGP_PahariEiJ_G0029659	Srsf5	100	98.162	ENSMPUG00000007458	SRSF5	100	98.162	Mustela_putorius_furo
MGP_PahariEiJ_G0029659	Srsf5	100	94.624	ENSMLUG00000011939	SRSF5	100	94.624	Myotis_lucifugus
MGP_PahariEiJ_G0029659	Srsf5	100	99.630	ENSNGAG00000010073	-	100	99.630	Nannospalax_galili
MGP_PahariEiJ_G0029659	Srsf5	93	70.189	ENSNBRG00000001285	srsf5b	63	83.422	Neolamprologus_brichardi
MGP_PahariEiJ_G0029659	Srsf5	100	98.162	ENSNLEG00000001615	SRSF5	100	100.000	Nomascus_leucogenys
MGP_PahariEiJ_G0029659	Srsf5	100	94.643	ENSOPRG00000008286	SRSF5	100	94.643	Ochotona_princeps
MGP_PahariEiJ_G0029659	Srsf5	100	97.778	ENSODEG00000013469	-	100	97.778	Octodon_degus
MGP_PahariEiJ_G0029659	Srsf5	67	97.765	ENSODEG00000000700	-	68	97.765	Octodon_degus
MGP_PahariEiJ_G0029659	Srsf5	93	70.566	ENSONIG00000005759	srsf5b	63	84.324	Oreochromis_niloticus
MGP_PahariEiJ_G0029659	Srsf5	100	92.593	ENSOANG00000013336	SRSF5	89	92.857	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0029659	Srsf5	100	96.377	ENSOCUG00000009274	SRSF5	100	96.377	Oryctolagus_cuniculus
MGP_PahariEiJ_G0029659	Srsf5	68	78.534	ENSORLG00000029854	srsf5b	58	79.787	Oryzias_latipes
MGP_PahariEiJ_G0029659	Srsf5	93	64.794	ENSORLG00015001720	srsf5b	63	81.818	Oryzias_latipes_hsok
MGP_PahariEiJ_G0029659	Srsf5	100	98.519	ENSOGAG00000015122	SRSF5	100	98.519	Otolemur_garnettii
MGP_PahariEiJ_G0029659	Srsf5	100	98.162	ENSPPAG00000029921	SRSF5	100	100.000	Pan_paniscus
MGP_PahariEiJ_G0029659	Srsf5	100	98.162	ENSPPRG00000012903	SRSF5	99	100.000	Panthera_pardus
MGP_PahariEiJ_G0029659	Srsf5	100	98.162	ENSPTIG00000018589	SRSF5	99	100.000	Panthera_tigris_altaica
MGP_PahariEiJ_G0029659	Srsf5	100	98.162	ENSPTRG00000006488	SRSF5	100	100.000	Pan_troglodytes
MGP_PahariEiJ_G0029659	Srsf5	100	97.794	ENSPANG00000021091	SRSF5	100	100.000	Papio_anubis
MGP_PahariEiJ_G0029659	Srsf5	100	95.556	ENSPSIG00000012522	SRSF5	100	95.556	Pelodiscus_sinensis
MGP_PahariEiJ_G0029659	Srsf5	100	100.000	ENSPEMG00000020173	Srsf5	100	100.000	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0029659	Srsf5	68	61.881	ENSPMAG00000007790	srsf5b	67	62.694	Petromyzon_marinus
MGP_PahariEiJ_G0029659	Srsf5	67	99.441	ENSPCIG00000011877	SRSF5	67	99.441	Phascolarctos_cinereus
MGP_PahariEiJ_G0029659	Srsf5	96	71.691	ENSPMEG00000012751	srsf5b	84	75.000	Poecilia_mexicana
MGP_PahariEiJ_G0029659	Srsf5	100	98.162	ENSPPYG00000005945	SRSF5	100	98.162	Pongo_abelii
MGP_PahariEiJ_G0029659	Srsf5	54	99.315	ENSPCAG00000004405	SRSF5	100	99.315	Procavia_capensis
MGP_PahariEiJ_G0029659	Srsf5	100	98.889	ENSPCOG00000014442	SRSF5	100	98.889	Propithecus_coquereli
MGP_PahariEiJ_G0029659	Srsf5	100	76.838	ENSPVAG00000009828	SRSF5	100	76.838	Pteropus_vampyrus
MGP_PahariEiJ_G0029659	Srsf5	93	71.318	ENSPNYG00000002669	srsf5b	94	75.000	Pundamilia_nyererei
MGP_PahariEiJ_G0029659	Srsf5	68	82.162	ENSPNAG00000011262	srsf5b	84	79.200	Pygocentrus_nattereri
MGP_PahariEiJ_G0029659	Srsf5	100	100.000	ENSRNOG00000005513	Srsf5	100	100.000	Rattus_norvegicus
MGP_PahariEiJ_G0029659	Srsf5	100	98.162	ENSRBIG00000013003	SRSF5	100	100.000	Rhinopithecus_bieti
MGP_PahariEiJ_G0029659	Srsf5	100	98.162	ENSRROG00000043407	SRSF5	100	100.000	Rhinopithecus_roxellana
MGP_PahariEiJ_G0029659	Srsf5	100	98.162	ENSSBOG00000030784	SRSF5	100	100.000	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0029659	Srsf5	67	99.441	ENSSHAG00000002871	SRSF5	67	99.441	Sarcophilus_harrisii
MGP_PahariEiJ_G0029659	Srsf5	68	77.723	ENSSMAG00000019728	srsf5b	61	79.695	Scophthalmus_maximus
MGP_PahariEiJ_G0029659	Srsf5	96	67.286	ENSSDUG00000005766	srsf5b	65	81.081	Seriola_dumerili
MGP_PahariEiJ_G0029659	Srsf5	93	68.321	ENSSLDG00000023255	srsf5b	84	75.000	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0029659	Srsf5	100	89.259	ENSSARG00000001059	SRSF5	88	88.235	Sorex_araneus
MGP_PahariEiJ_G0029659	Srsf5	100	91.756	ENSSPUG00000002464	SRSF5	90	91.729	Sphenodon_punctatus
MGP_PahariEiJ_G0029659	Srsf5	92	68.217	ENSSPAG00000015325	srsf5b	63	84.865	Stegastes_partitus
MGP_PahariEiJ_G0029659	Srsf5	100	98.897	ENSSSCG00000032583	SRSF5	100	98.897	Sus_scrofa
MGP_PahariEiJ_G0029659	Srsf5	89	92.531	ENSTGUG00000011425	SRSF5	67	94.972	Taeniopygia_guttata
MGP_PahariEiJ_G0029659	Srsf5	68	83.333	ENSTRUG00000017811	srsf5b	59	84.153	Takifugu_rubripes
MGP_PahariEiJ_G0029659	Srsf5	100	71.326	ENSTNIG00000016411	srsf5b	66	84.153	Tetraodon_nigroviridis
MGP_PahariEiJ_G0029659	Srsf5	100	90.580	ENSTBEG00000001972	SRSF5	65	97.765	Tupaia_belangeri
MGP_PahariEiJ_G0029659	Srsf5	99	97.436	ENSTTRG00000003318	SRSF5	100	97.436	Tursiops_truncatus
MGP_PahariEiJ_G0029659	Srsf5	100	98.162	ENSUAMG00000014184	SRSF5	100	98.162	Ursus_americanus
MGP_PahariEiJ_G0029659	Srsf5	100	98.155	ENSUMAG00000009827	SRSF5	100	98.155	Ursus_maritimus
MGP_PahariEiJ_G0029659	Srsf5	100	98.889	ENSVPAG00000006448	SRSF5	100	98.889	Vicugna_pacos
MGP_PahariEiJ_G0029659	Srsf5	100	98.162	ENSVVUG00000003790	SRSF5	100	98.162	Vulpes_vulpes
MGP_PahariEiJ_G0029659	Srsf5	94	83.846	ENSXETG00000002211	srsf5	67	92.308	Xenopus_tropicalis
MGP_PahariEiJ_G0029659	Srsf5	96	66.418	ENSXCOG00000001570	srsf5b	92	66.176	Xiphophorus_couchianus
MGP_PahariEiJ_G0029659	Srsf5	92	71.863	ENSXMAG00000026416	srsf5b	84	75.969	Xiphophorus_maculatus