EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_PahariEiJ_G0029791 (Gene tree)
Gene ID: 110324215
Gene Symbol: Cpsf2
Alias: 100kDa|2610024B04Rik|Cpsf
Full Name: cleavage and polyadenylation specific factor 2
Gene Type: protein_coding
Species: Mus_pahari
Status: putative
Strand: Plus strand
Length: 31100 bases
Position: chr7:96211341-96242440
Accession: 110324215
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PahariEiJ_P0083254	Beta-Casp	PF10996.8	1.6e-20	1	1
MGP_PahariEiJ_P0083254	Lactamase_B	PF00753.27	2e-05	1	1
MGP_PahariEiJ_P0083254	RMMBL	PF07521.12	2e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PahariEiJ_T0083254	-	5225	-	MGP_PahariEiJ_P0083254	782 (aa)	XP_021057248	UPI000A30D4B7

Gene Model

Click here to download MGP_PahariEiJ_G0029791's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PahariEiJ_G0029791's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_PahariEiJ_G0029791	Cpsf2	100	98.210	ENSG00000165934	CPSF2	100	98.210	Homo_sapiens
MGP_PahariEiJ_G0029791	Cpsf2	100	85.678	ENSAPOG00000001242	cpsf2	100	85.678	Acanthochromis_polyacanthus
MGP_PahariEiJ_G0029791	Cpsf2	100	85.696	ENSACIG00000009331	cpsf2	100	85.696	Amphilophus_citrinellus
MGP_PahariEiJ_G0029791	Cpsf2	100	85.805	ENSAOCG00000014095	cpsf2	100	85.805	Amphiprion_ocellaris
MGP_PahariEiJ_G0029791	Cpsf2	100	85.805	ENSAPEG00000009158	cpsf2	100	85.805	Amphiprion_percula
MGP_PahariEiJ_G0029791	Cpsf2	96	85.789	ENSATEG00000017644	cpsf2	100	84.140	Anabas_testudineus
MGP_PahariEiJ_G0029791	Cpsf2	100	95.541	ENSAPLG00000006330	CPSF2	100	95.541	Anas_platyrhynchos
MGP_PahariEiJ_G0029791	Cpsf2	100	94.636	ENSACAG00000009245	CPSF2	100	94.636	Anolis_carolinensis
MGP_PahariEiJ_G0029791	Cpsf2	100	98.210	ENSANAG00000022915	CPSF2	100	98.210	Aotus_nancymaae
MGP_PahariEiJ_G0029791	Cpsf2	100	85.133	ENSAMXG00000018696	cpsf2	100	85.133	Astyanax_mexicanus
MGP_PahariEiJ_G0029791	Cpsf2	100	98.465	ENSBTAG00000010227	CPSF2	100	98.465	Bos_taurus
MGP_PahariEiJ_G0029791	Cpsf2	100	41.335	WBGene00017313	cpsf-2	100	41.017	Caenorhabditis_elegans
MGP_PahariEiJ_G0029791	Cpsf2	100	98.210	ENSCJAG00000018069	CPSF2	100	98.210	Callithrix_jacchus
MGP_PahariEiJ_G0029791	Cpsf2	100	98.338	ENSCAFG00000010909	CPSF2	100	98.338	Canis_familiaris
MGP_PahariEiJ_G0029791	Cpsf2	100	98.338	ENSCAFG00020020670	CPSF2	100	98.338	Canis_lupus_dingo
MGP_PahariEiJ_G0029791	Cpsf2	100	98.465	ENSCHIG00000023848	CPSF2	100	98.465	Capra_hircus
MGP_PahariEiJ_G0029791	Cpsf2	100	97.954	ENSTSYG00000009036	CPSF2	100	97.954	Carlito_syrichta
MGP_PahariEiJ_G0029791	Cpsf2	100	98.465	ENSCPOG00000010899	CPSF2	100	98.465	Cavia_porcellus
MGP_PahariEiJ_G0029791	Cpsf2	100	98.210	ENSCCAG00000028088	CPSF2	100	98.210	Cebus_capucinus
MGP_PahariEiJ_G0029791	Cpsf2	100	98.338	ENSCATG00000030132	CPSF2	100	98.338	Cercocebus_atys
MGP_PahariEiJ_G0029791	Cpsf2	100	98.338	ENSCLAG00000012404	CPSF2	100	98.338	Chinchilla_lanigera
MGP_PahariEiJ_G0029791	Cpsf2	100	98.338	ENSCSAG00000011300	CPSF2	100	98.338	Chlorocebus_sabaeus
MGP_PahariEiJ_G0029791	Cpsf2	100	91.816	ENSCHOG00000012904	CPSF2	100	91.816	Choloepus_hoffmanni
MGP_PahariEiJ_G0029791	Cpsf2	100	95.658	ENSCPBG00000008766	CPSF2	97	95.658	Chrysemys_picta_bellii
MGP_PahariEiJ_G0029791	Cpsf2	100	54.795	ENSCING00000007881	-	100	54.670	Ciona_intestinalis
MGP_PahariEiJ_G0029791	Cpsf2	94	98.361	ENSCANG00000041651	CPSF2	100	98.361	Colobus_angolensis_palliatus
MGP_PahariEiJ_G0029791	Cpsf2	100	98.977	ENSCGRG00001006901	Cpsf2	100	98.977	Cricetulus_griseus_chok1gshd
MGP_PahariEiJ_G0029791	Cpsf2	100	98.977	ENSCGRG00000012416	Cpsf2	100	98.977	Cricetulus_griseus_crigri
MGP_PahariEiJ_G0029791	Cpsf2	100	83.270	ENSCSEG00000004116	cpsf2	100	83.270	Cynoglossus_semilaevis
MGP_PahariEiJ_G0029791	Cpsf2	100	84.918	ENSCVAG00000000095	cpsf2	100	85.044	Cyprinodon_variegatus
MGP_PahariEiJ_G0029791	Cpsf2	100	85.443	ENSDARG00000028971	cpsf2	100	85.443	Danio_rerio
MGP_PahariEiJ_G0029791	Cpsf2	100	98.338	ENSDNOG00000042757	CPSF2	100	98.338	Dasypus_novemcinctus
MGP_PahariEiJ_G0029791	Cpsf2	100	98.338	ENSDORG00000013709	Cpsf2	100	98.338	Dipodomys_ordii
MGP_PahariEiJ_G0029791	Cpsf2	100	53.300	FBgn0027873	Cpsf100	100	53.059	Drosophila_melanogaster
MGP_PahariEiJ_G0029791	Cpsf2	100	89.527	ENSETEG00000012123	CPSF2	100	89.527	Echinops_telfairi
MGP_PahariEiJ_G0029791	Cpsf2	52	75.980	ENSEBUG00000012098	cpsf2	93	75.980	Eptatretus_burgeri
MGP_PahariEiJ_G0029791	Cpsf2	89	97.500	ENSEASG00005021193	CPSF2	100	97.500	Equus_asinus_asinus
MGP_PahariEiJ_G0029791	Cpsf2	100	98.210	ENSECAG00000023935	CPSF2	100	98.210	Equus_caballus
MGP_PahariEiJ_G0029791	Cpsf2	100	83.689	ENSELUG00000008442	cpsf2	100	83.689	Esox_lucius
MGP_PahariEiJ_G0029791	Cpsf2	100	98.338	ENSFCAG00000007886	CPSF2	100	98.338	Felis_catus
MGP_PahariEiJ_G0029791	Cpsf2	100	95.785	ENSFALG00000002412	CPSF2	100	95.785	Ficedula_albicollis
MGP_PahariEiJ_G0029791	Cpsf2	100	98.338	ENSFDAG00000006327	CPSF2	100	98.338	Fukomys_damarensis
MGP_PahariEiJ_G0029791	Cpsf2	96	84.183	ENSFHEG00000015465	cpsf2	98	84.444	Fundulus_heteroclitus
MGP_PahariEiJ_G0029791	Cpsf2	100	83.081	ENSGMOG00000008761	cpsf2	100	83.081	Gadus_morhua
MGP_PahariEiJ_G0029791	Cpsf2	100	95.019	ENSGALG00000010783	CPSF2	100	95.530	Gallus_gallus
MGP_PahariEiJ_G0029791	Cpsf2	100	85.425	ENSGAFG00000001407	cpsf2	100	85.425	Gambusia_affinis
MGP_PahariEiJ_G0029791	Cpsf2	100	84.284	ENSGACG00000008418	cpsf2	100	84.284	Gasterosteus_aculeatus
MGP_PahariEiJ_G0029791	Cpsf2	100	95.785	ENSGAGG00000008287	CPSF2	100	95.785	Gopherus_agassizii
MGP_PahariEiJ_G0029791	Cpsf2	100	98.210	ENSGGOG00000011799	CPSF2	100	98.210	Gorilla_gorilla
MGP_PahariEiJ_G0029791	Cpsf2	100	84.791	ENSHBUG00000023466	cpsf2	100	84.791	Haplochromis_burtoni
MGP_PahariEiJ_G0029791	Cpsf2	100	98.210	ENSHGLG00000018311	CPSF2	100	98.210	Heterocephalus_glaber_female
MGP_PahariEiJ_G0029791	Cpsf2	100	98.210	ENSHGLG00100016460	CPSF2	100	98.210	Heterocephalus_glaber_male
MGP_PahariEiJ_G0029791	Cpsf2	100	84.157	ENSHCOG00000019527	cpsf2	98	84.157	Hippocampus_comes
MGP_PahariEiJ_G0029791	Cpsf2	100	85.006	ENSIPUG00000020857	cpsf2	100	85.006	Ictalurus_punctatus
MGP_PahariEiJ_G0029791	Cpsf2	100	98.338	ENSSTOG00000009528	CPSF2	100	98.338	Ictidomys_tridecemlineatus
MGP_PahariEiJ_G0029791	Cpsf2	100	98.465	ENSJJAG00000017925	Cpsf2	100	98.465	Jaculus_jaculus
MGP_PahariEiJ_G0029791	Cpsf2	100	84.537	ENSKMAG00000019429	cpsf2	100	84.537	Kryptolebias_marmoratus
MGP_PahariEiJ_G0029791	Cpsf2	95	83.534	ENSLBEG00000011585	cpsf2	100	83.690	Labrus_bergylta
MGP_PahariEiJ_G0029791	Cpsf2	100	89.400	ENSLACG00000019024	CPSF2	100	89.655	Latimeria_chalumnae
MGP_PahariEiJ_G0029791	Cpsf2	100	87.199	ENSLOCG00000014102	cpsf2	100	87.199	Lepisosteus_oculatus
MGP_PahariEiJ_G0029791	Cpsf2	100	97.959	ENSLAFG00000004891	CPSF2	100	97.959	Loxodonta_africana
MGP_PahariEiJ_G0029791	Cpsf2	100	98.338	ENSMFAG00000041212	CPSF2	100	98.338	Macaca_fascicularis
MGP_PahariEiJ_G0029791	Cpsf2	100	98.338	ENSMMUG00000000699	CPSF2	100	98.338	Macaca_mulatta
MGP_PahariEiJ_G0029791	Cpsf2	100	98.338	ENSMNEG00000031584	CPSF2	100	98.338	Macaca_nemestrina
MGP_PahariEiJ_G0029791	Cpsf2	100	98.338	ENSMLEG00000029394	CPSF2	100	98.338	Mandrillus_leucophaeus
MGP_PahariEiJ_G0029791	Cpsf2	100	85.298	ENSMAMG00000004235	cpsf2	100	85.298	Mastacembelus_armatus
MGP_PahariEiJ_G0029791	Cpsf2	100	84.918	ENSMZEG00005001769	cpsf2	100	84.918	Maylandia_zebra
MGP_PahariEiJ_G0029791	Cpsf2	100	95.026	ENSMGAG00000013122	CPSF2	100	95.536	Meleagris_gallopavo
MGP_PahariEiJ_G0029791	Cpsf2	100	98.849	ENSMAUG00000015160	Cpsf2	100	98.849	Mesocricetus_auratus
MGP_PahariEiJ_G0029791	Cpsf2	100	98.465	ENSMICG00000016441	CPSF2	100	98.465	Microcebus_murinus
MGP_PahariEiJ_G0029791	Cpsf2	100	98.977	ENSMOCG00000015372	Cpsf2	100	98.977	Microtus_ochrogaster
MGP_PahariEiJ_G0029791	Cpsf2	100	80.735	ENSMMOG00000015590	cpsf2	100	80.735	Mola_mola
MGP_PahariEiJ_G0029791	Cpsf2	100	97.826	ENSMODG00000002042	CPSF2	100	97.826	Monodelphis_domestica
MGP_PahariEiJ_G0029791	Cpsf2	100	82.383	ENSMALG00000022275	cpsf2	100	82.383	Monopterus_albus
MGP_PahariEiJ_G0029791	Cpsf2	100	99.488	ENSMUSG00000041781	Cpsf2	100	99.488	Mus_musculus
MGP_PahariEiJ_G0029791	Cpsf2	100	99.488	MGP_SPRETEiJ_G0018877	Cpsf2	100	99.488	Mus_spretus
MGP_PahariEiJ_G0029791	Cpsf2	100	98.338	ENSMPUG00000007617	CPSF2	98	98.338	Mustela_putorius_furo
MGP_PahariEiJ_G0029791	Cpsf2	100	98.082	ENSMLUG00000005570	CPSF2	100	98.082	Myotis_lucifugus
MGP_PahariEiJ_G0029791	Cpsf2	100	98.977	ENSNGAG00000020312	Cpsf2	100	98.977	Nannospalax_galili
MGP_PahariEiJ_G0029791	Cpsf2	100	85.298	ENSNBRG00000022402	cpsf2	100	85.298	Neolamprologus_brichardi
MGP_PahariEiJ_G0029791	Cpsf2	100	97.570	ENSNLEG00000017132	CPSF2	100	97.570	Nomascus_leucogenys
MGP_PahariEiJ_G0029791	Cpsf2	91	99.029	ENSMEUG00000008138	CPSF2	91	99.029	Notamacropus_eugenii
MGP_PahariEiJ_G0029791	Cpsf2	94	90.847	ENSOPRG00000008484	-	100	90.847	Ochotona_princeps
MGP_PahariEiJ_G0029791	Cpsf2	100	98.465	ENSODEG00000008682	CPSF2	100	98.465	Octodon_degus
MGP_PahariEiJ_G0029791	Cpsf2	100	85.551	ENSONIG00000005901	cpsf2	100	85.551	Oreochromis_niloticus
MGP_PahariEiJ_G0029791	Cpsf2	100	97.315	ENSOANG00000003822	CPSF2	100	97.315	Ornithorhynchus_anatinus
MGP_PahariEiJ_G0029791	Cpsf2	100	98.338	ENSOCUG00000005713	CPSF2	100	98.338	Oryctolagus_cuniculus
MGP_PahariEiJ_G0029791	Cpsf2	100	79.594	ENSORLG00000011628	cpsf2	100	79.594	Oryzias_latipes
MGP_PahariEiJ_G0029791	Cpsf2	100	84.284	ENSORLG00020016980	cpsf2	100	84.284	Oryzias_latipes_hni
MGP_PahariEiJ_G0029791	Cpsf2	100	84.284	ENSORLG00015011910	cpsf2	100	84.284	Oryzias_latipes_hsok
MGP_PahariEiJ_G0029791	Cpsf2	100	83.777	ENSOMEG00000022876	cpsf2	100	83.777	Oryzias_melastigma
MGP_PahariEiJ_G0029791	Cpsf2	100	95.408	ENSOARG00000012889	CPSF2	100	95.408	Ovis_aries
MGP_PahariEiJ_G0029791	Cpsf2	100	98.210	ENSPPAG00000039666	CPSF2	100	98.210	Pan_paniscus
MGP_PahariEiJ_G0029791	Cpsf2	99	98.335	ENSPPRG00000010869	CPSF2	100	98.335	Panthera_pardus
MGP_PahariEiJ_G0029791	Cpsf2	100	98.338	ENSPTIG00000021202	CPSF2	100	98.338	Panthera_tigris_altaica
MGP_PahariEiJ_G0029791	Cpsf2	100	98.210	ENSPTRG00000006651	CPSF2	100	98.210	Pan_troglodytes
MGP_PahariEiJ_G0029791	Cpsf2	100	98.338	ENSPANG00000017417	CPSF2	100	98.338	Papio_anubis
MGP_PahariEiJ_G0029791	Cpsf2	100	81.576	ENSPKIG00000021453	cpsf2	100	81.576	Paramormyrops_kingsleyae
MGP_PahariEiJ_G0029791	Cpsf2	100	95.147	ENSPSIG00000006289	CPSF2	100	95.147	Pelodiscus_sinensis
MGP_PahariEiJ_G0029791	Cpsf2	76	79.734	ENSPMGG00000002511	cpsf2	100	80.233	Periophthalmus_magnuspinnatus
MGP_PahariEiJ_G0029791	Cpsf2	100	99.233	ENSPEMG00000007917	Cpsf2	100	99.233	Peromyscus_maniculatus_bairdii
MGP_PahariEiJ_G0029791	Cpsf2	100	74.336	ENSPMAG00000006205	cpsf2	100	74.336	Petromyzon_marinus
MGP_PahariEiJ_G0029791	Cpsf2	100	97.826	ENSPCIG00000011393	CPSF2	100	97.826	Phascolarctos_cinereus
MGP_PahariEiJ_G0029791	Cpsf2	100	85.044	ENSPFOG00000018648	cpsf2	100	85.044	Poecilia_formosa
MGP_PahariEiJ_G0029791	Cpsf2	100	85.044	ENSPLAG00000019199	cpsf2	99	85.044	Poecilia_latipinna
MGP_PahariEiJ_G0029791	Cpsf2	96	85.395	ENSPMEG00000012100	cpsf2	100	84.759	Poecilia_mexicana
MGP_PahariEiJ_G0029791	Cpsf2	100	85.171	ENSPREG00000008960	cpsf2	100	85.171	Poecilia_reticulata
MGP_PahariEiJ_G0029791	Cpsf2	63	97.581	ENSPPYG00000029685	-	100	97.581	Pongo_abelii
MGP_PahariEiJ_G0029791	Cpsf2	100	98.082	ENSPCAG00000012477	CPSF2	100	98.082	Procavia_capensis
MGP_PahariEiJ_G0029791	Cpsf2	100	98.210	ENSPCOG00000026387	CPSF2	100	98.210	Propithecus_coquereli
MGP_PahariEiJ_G0029791	Cpsf2	65	100.000	ENSPVAG00000004223	CPSF2	65	100.000	Pteropus_vampyrus
MGP_PahariEiJ_G0029791	Cpsf2	100	84.937	ENSPNYG00000023356	cpsf2	100	84.937	Pundamilia_nyererei
MGP_PahariEiJ_G0029791	Cpsf2	100	86.150	ENSPNAG00000001849	cpsf2	100	86.150	Pygocentrus_nattereri
MGP_PahariEiJ_G0029791	Cpsf2	100	99.361	ENSRNOG00000005733	Cpsf2	100	99.361	Rattus_norvegicus
MGP_PahariEiJ_G0029791	Cpsf2	100	98.338	ENSRBIG00000044792	CPSF2	100	98.338	Rhinopithecus_bieti
MGP_PahariEiJ_G0029791	Cpsf2	100	98.338	ENSRROG00000034875	CPSF2	100	98.338	Rhinopithecus_roxellana
MGP_PahariEiJ_G0029791	Cpsf2	100	98.210	ENSSBOG00000024571	CPSF2	100	98.210	Saimiri_boliviensis_boliviensis
MGP_PahariEiJ_G0029791	Cpsf2	100	97.954	ENSSHAG00000010458	CPSF2	100	97.954	Sarcophilus_harrisii
MGP_PahariEiJ_G0029791	Cpsf2	100	86.658	ENSSFOG00015002117	cpsf2	100	86.658	Scleropages_formosus
MGP_PahariEiJ_G0029791	Cpsf2	100	83.777	ENSSMAG00000002001	cpsf2	100	83.777	Scophthalmus_maximus
MGP_PahariEiJ_G0029791	Cpsf2	100	85.678	ENSSDUG00000004084	cpsf2	100	85.678	Seriola_dumerili
MGP_PahariEiJ_G0029791	Cpsf2	100	85.425	ENSSLDG00000024330	cpsf2	100	85.425	Seriola_lalandi_dorsalis
MGP_PahariEiJ_G0029791	Cpsf2	58	100.000	ENSSARG00000009784	-	63	100.000	Sorex_araneus
MGP_PahariEiJ_G0029791	Cpsf2	100	95.019	ENSSPUG00000013485	CPSF2	100	95.019	Sphenodon_punctatus
MGP_PahariEiJ_G0029791	Cpsf2	100	84.664	ENSSPAG00000013284	cpsf2	100	84.664	Stegastes_partitus
MGP_PahariEiJ_G0029791	Cpsf2	100	98.210	ENSSSCG00000002447	CPSF2	100	98.210	Sus_scrofa
MGP_PahariEiJ_G0029791	Cpsf2	100	95.913	ENSTGUG00000012571	-	100	95.913	Taeniopygia_guttata
MGP_PahariEiJ_G0029791	Cpsf2	100	84.411	ENSTRUG00000003742	cpsf2	100	84.411	Takifugu_rubripes
MGP_PahariEiJ_G0029791	Cpsf2	100	83.186	ENSTNIG00000012228	cpsf2	100	83.944	Tetraodon_nigroviridis
MGP_PahariEiJ_G0029791	Cpsf2	91	100.000	ENSTBEG00000004530	CPSF2	94	100.000	Tupaia_belangeri
MGP_PahariEiJ_G0029791	Cpsf2	88	97.917	ENSTTRG00000008697	CPSF2	88	97.917	Tursiops_truncatus
MGP_PahariEiJ_G0029791	Cpsf2	100	98.465	ENSUAMG00000028071	CPSF2	100	98.465	Ursus_americanus
MGP_PahariEiJ_G0029791	Cpsf2	100	98.465	ENSUMAG00000005029	CPSF2	100	98.465	Ursus_maritimus
MGP_PahariEiJ_G0029791	Cpsf2	99	98.335	ENSVPAG00000003503	CPSF2	100	98.335	Vicugna_pacos
MGP_PahariEiJ_G0029791	Cpsf2	100	98.338	ENSVVUG00000024642	CPSF2	100	98.338	Vulpes_vulpes
MGP_PahariEiJ_G0029791	Cpsf2	100	91.443	ENSXETG00000010289	cpsf2	100	91.443	Xenopus_tropicalis
MGP_PahariEiJ_G0029791	Cpsf2	100	85.298	ENSXCOG00000001764	cpsf2	100	85.298	Xiphophorus_couchianus
MGP_PahariEiJ_G0029791	Cpsf2	100	85.425	ENSXMAG00000017048	cpsf2	100	85.425	Xiphophorus_maculatus